ISEc28
- Family IS5
- Group IS903
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FJ187822 | ND | Escherichia coli | Escherichia coli plasmid pCOP1 |
DNA section
IS Length : 897 bp
Ends
IR Length :
IRL : CTGGATGGACGAACAAGCCATTAAGCAGTGGCATTGCCTGGTCCACCATG
IRR : GGCGTTGTTGACCCAATCCGTCGCTGGATGGCCGTTCCCCAACCCGTTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CTGGATGGACGAACAAGCCATTAAGCAGTGGCATTGCCTGGTCCACCATGGCCGCCGAGGGAGAGGTTTCCACTACAGTGACACCGCCATTGAGACGGCC
CTGATGCTAAAAGGCTTGTTCAAGTTGCCGCTGCGGGCGCTAGAAGGCTTCATTAACTCGTTGTTCCAACTGATGGCGGTGCCTTTGCAGTCGCCGGACT
ATAGCTGTATCAGCAAGCGCGCCAAGACCGTCGACATCAAGTACCGCCTCCCCAGCCAAGGCCCGGTGGCTCACTTGGTCATTGATGCCACCGGCCTCAA
GGTCTATGGCGAAGGCGAATGGAAAATTCGCAAACACGGCAAGGAGAAGCGACGAGTGTGGCGCAAGCTCCACTTGGCGGTGGATGCCACAACCCATGCG
GTCATCGCTGCCGAAGTCAGCCTGGAGACGGTGGCGGATAACGAGGTGTTACCGACGTTGCTCAACCCCTTACGACGCAAGATAAAACAGGTCAGCGCCG
ATGGTGCGTATGACACCAAGGCCTGTCATGCGCTACTGAAGAAAAAGGGGGCGAAAGCCACCATACCGCCGAGAAAAAATGCGGCACCGTGGGAGGAAGG
CCATCCCCGCAACGAGGCGGTGACGGCGCTCAAGGCCGGTGAACTGAAGCAATGGAAGAAAGACTCCGGCTATCACCAGCGCTCGATAGCCGAGACCGCC
ATGTACCGGTTCAAGCAACTCATCGGGCCAACGCTGAGCCTGCGGAACTACAACGCCCAGGTGGGCGAAATCCTGGCTGGCGTGAAGGTGATGAACAAGC
TGATAGGGCTTGGTATGCCTGTTCGCCAGCCAGTGAATTGAGTGGTATCAACGGGTTGGGGAACGGCCATCCAGCGACGGATTGGGTCAACAACGCC
CTGATGCTAAAAGGCTTGTTCAAGTTGCCGCTGCGGGCGCTAGAAGGCTTCATTAACTCGTTGTTCCAACTGATGGCGGTGCCTTTGCAGTCGCCGGACT
ATAGCTGTATCAGCAAGCGCGCCAAGACCGTCGACATCAAGTACCGCCTCCCCAGCCAAGGCCCGGTGGCTCACTTGGTCATTGATGCCACCGGCCTCAA
GGTCTATGGCGAAGGCGAATGGAAAATTCGCAAACACGGCAAGGAGAAGCGACGAGTGTGGCGCAAGCTCCACTTGGCGGTGGATGCCACAACCCATGCG
GTCATCGCTGCCGAAGTCAGCCTGGAGACGGTGGCGGATAACGAGGTGTTACCGACGTTGCTCAACCCCTTACGACGCAAGATAAAACAGGTCAGCGCCG
ATGGTGCGTATGACACCAAGGCCTGTCATGCGCTACTGAAGAAAAAGGGGGCGAAAGCCACCATACCGCCGAGAAAAAATGCGGCACCGTGGGAGGAAGG
CCATCCCCGCAACGAGGCGGTGACGGCGCTCAAGGCCGGTGAACTGAAGCAATGGAAGAAAGACTCCGGCTATCACCAGCGCTCGATAGCCGAGACCGCC
ATGTACCGGTTCAAGCAACTCATCGGGCCAACGCTGAGCCTGCGGAACTACAACGCCCAGGTGGGCGAAATCCTGGCTGGCGTGAAGGTGATGAACAAGC
TGATAGGGCTTGGTATGCCTGTTCGCCAGCCAGTGAATTGAGTGGTATCAACGGGTTGGGGAACGGCCATCCAGCGACGGATTGGGTCAACAACGCC
Protein section
ORF number : 0
Comments
ISEc28 is a 5' truncated IS.
The partial transposase is 95% aa similar to ISEc35.
The partial transposase is 95% aa similar to ISEc35.
References
1] Submitted by ISfinder (2011).
2] Bercot,B., Poirel,L. and Nordmann,P. (2008) Antimicrob. Agents Chemother. 52 (12), 4526-4527
2] Bercot,B., Poirel,L. and Nordmann,P. (2008) Antimicrob. Agents Chemother. 52 (12), 4526-4527