ISAzs8
- Family ISL3
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_013854 | ND | Azospirillum sp. | Azospirillum sp. B510 |
DNA section
IS Length : 1373 bp
Ends
IR Length : 9/11
IRL : GGCGGCAACCCTGGCGCCCGTCATGCCACGGCGATGGGAATGCCGATCAG
IRR : GGCGACATCCCAATTTGGGCTCTTGGAAATTTTGTGTGGATGAGTAGAAG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CCGGCTGTAGTACTA | TGACAGGAACTGTTT | 0 | |
| ATCGGCTTGGCCCTA | TGACAGTAGAATGAC | 0 |
DNA sequence
GGCGGCAACCCTGGCGCCCGTCATGCCACGGCGATGGGAATGCCGATCAGCCGAACGACGCTGTTGCATCGCGTTCGCGCCGGCGGAACCAAGCCGATCC
CTCCGGTCACTGTGCTGGGCGTGGACGATTGGGCTTGGCGTAAGGGGCATCGCTACGGCACGATCCTGTGCGATCTGGAGCGTCGGCGGGTCATCGACCT
GTTGCCCGACCGCAGTGCCGACACCTTGGCGGCATGGCTCATGATGCACCCCGGCATCTCCGTCGTCGCCCGTGACCGCGCCGGCGCCTACGCCGAGGGG
GCCGCCCGTGGTGCTCCCGAAGCGATCCAGGTCGCGGACCGGTGGCATTTGCTGCGAAACGCGAGCGACGCCCTGCGCGGGGTTCTCGAGCATCATCACC
GCGATCTGCGCGAGGCCGCTCAAACGGCCGCCCTGAAACCGGAACCGCTGACGCTGGAGGAGAACAACTCGGGACCAGCCACTGCATCCGAAACCGAACG
GCCGTTGCGAGCCGCAGAGCGGCGGTCGCGGGCTGCGCAGGAGCGCCGCGACGCCCGCTTCGCCGAAGTTGCGCGCTTGCGTGAACAGGGCATGGCGCTG
AAAGCCATTGCCCGCACCACCGGGATCGAACGCAAGACGGTGCGCCGCTGGTTGCGGGCCGGCCATGCACCGACATGGCGCCATGCCGCTCGCGCGACCA
GCATCCTCGACCCGTATCGCGCCCATCTGGAGGAGCGTTGGCAAGCCGGGTGTCACAATGGGGCAGCGCTCTGGCGCGACCTCAAGGGCCAGGGCTTTGC
CGGACAATATTCCGTTGTGCGGAACTGGGCGATGCAGCGGCGGCGAGAGGACCCGAGCCTCAGAAAATCCACAGGACCGAGGCGTCACTCGGCGGCGACC
AGAGTTACGGAGCCACCGACGCCTCGGCGGGCAGTGCGCCTGCTAACCGTCGACCTCGACGTGCTTTCCGAGGAGGACCGCCAGTTCGTCGTCTCCTTGC
GGGACCGCTCGCCCGCCATCGCCACCGCCGCCGACCTGATCAGCCGCTTCACGACGATGGTGAAGGACAAGACGCCGACCATGTTCGACGGCTGGCTGCG
TGAGGCGGAGGCCAGTGCCCTGGGGCCGTTCGCCGCCGGCATCCGGCGCGACGAGGACGCCGTGCGCGCCGCGCTCACCGAGCCGTGGAGTAGCGGGCAA
GTCGAGGGCCACGTCAATCGGCTCAAGGTCATCAAGCGGGATATGTACGGCCGTGCCGGCTTCGATCTCCTACGCAGTCGGGTCTTGGCTCACGCCTAAC
GCGAACATCACATCCCCAAACACCTTCTACTCATCCACACAAAATTTCCAAGAGCCCAAATTGGGATGTCGCC
CTCCGGTCACTGTGCTGGGCGTGGACGATTGGGCTTGGCGTAAGGGGCATCGCTACGGCACGATCCTGTGCGATCTGGAGCGTCGGCGGGTCATCGACCT
GTTGCCCGACCGCAGTGCCGACACCTTGGCGGCATGGCTCATGATGCACCCCGGCATCTCCGTCGTCGCCCGTGACCGCGCCGGCGCCTACGCCGAGGGG
GCCGCCCGTGGTGCTCCCGAAGCGATCCAGGTCGCGGACCGGTGGCATTTGCTGCGAAACGCGAGCGACGCCCTGCGCGGGGTTCTCGAGCATCATCACC
GCGATCTGCGCGAGGCCGCTCAAACGGCCGCCCTGAAACCGGAACCGCTGACGCTGGAGGAGAACAACTCGGGACCAGCCACTGCATCCGAAACCGAACG
GCCGTTGCGAGCCGCAGAGCGGCGGTCGCGGGCTGCGCAGGAGCGCCGCGACGCCCGCTTCGCCGAAGTTGCGCGCTTGCGTGAACAGGGCATGGCGCTG
AAAGCCATTGCCCGCACCACCGGGATCGAACGCAAGACGGTGCGCCGCTGGTTGCGGGCCGGCCATGCACCGACATGGCGCCATGCCGCTCGCGCGACCA
GCATCCTCGACCCGTATCGCGCCCATCTGGAGGAGCGTTGGCAAGCCGGGTGTCACAATGGGGCAGCGCTCTGGCGCGACCTCAAGGGCCAGGGCTTTGC
CGGACAATATTCCGTTGTGCGGAACTGGGCGATGCAGCGGCGGCGAGAGGACCCGAGCCTCAGAAAATCCACAGGACCGAGGCGTCACTCGGCGGCGACC
AGAGTTACGGAGCCACCGACGCCTCGGCGGGCAGTGCGCCTGCTAACCGTCGACCTCGACGTGCTTTCCGAGGAGGACCGCCAGTTCGTCGTCTCCTTGC
GGGACCGCTCGCCCGCCATCGCCACCGCCGCCGACCTGATCAGCCGCTTCACGACGATGGTGAAGGACAAGACGCCGACCATGTTCGACGGCTGGCTGCG
TGAGGCGGAGGCCAGTGCCCTGGGGCCGTTCGCCGCCGGCATCCGGCGCGACGAGGACGCCGTGCGCGCCGCGCTCACCGAGCCGTGGAGTAGCGGGCAA
GTCGAGGGCCACGTCAATCGGCTCAAGGTCATCAAGCGGGATATGTACGGCCGTGCCGGCTTCGATCTCCTACGCAGTCGGGTCTTGGCTCACGCCTAAC
GCGAACATCACATCCCCAAACACCTTCTACTCATCCACACAAAATTTCCAAGAGCCCAAATTGGGATGTCGCC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1266 bp | 412 aa | 34 | 1299 | + | No |
Chemistry : Unknow
ORF sequence :
MGMPISRTTLLHRVRAGGTKPIPPVTVLGVDDWAWRKGHRYGTILCDLERRRVIDLLPDRSADTLAAWLMMHPGISVVARDRAGAYAEGAARGAPEAIQV
ADRWHLLRNASDALRGVLEHHHRDLREAAQTAALKPEPLTLEENNSGPATASETERPLRAAERRSRAAQERRDARFAEVARLREQGMALKAIARTTGIER
KTVRRWLRAGHAPTWRHAARATSILDPYRAHLEERWQAGCHNGAALWRDLKGQGFAGQYSVVRNWAMQRRREDPSLRKSTGPRRHSAATRVTEPPTPRRA
VRLLTVDLDVLSEEDRQFVVSLRDRSPAIATAADLISRFTTMVKDKTPTMFDGWLREAEASALGPFAAGIRRDEDAVRAALTEPWSSGQVEGHVNRLKVI
KRDMYGRAGFDLLRSRVLAHA
ADRWHLLRNASDALRGVLEHHHRDLREAAQTAALKPEPLTLEENNSGPATASETERPLRAAERRSRAAQERRDARFAEVARLREQGMALKAIARTTGIER
KTVRRWLRAGHAPTWRHAARATSILDPYRAHLEERWQAGCHNGAALWRDLKGQGFAGQYSVVRNWAMQRRREDPSLRKSTGPRRHSAATRVTEPPTPRRA
VRLLTVDLDVLSEEDRQFVVSLRDRSPAIATAADLISRFTTMVKDKTPTMFDGWLREAEASALGPFAAGIRRDEDAVRAALTEPWSSGQVEGHVNRLKVI
KRDMYGRAGFDLLRSRVLAHA
Blast result :
Comments
ISAzs8 is 62% aa similar to ISAli18.
References
1] ISfinder annotation (2010)
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.
2] Kaneko,T., Minamisawa,K., Isawa,T., Nakatsukasa,H., Mitsui,H., Kawaharada,Y., Nakamura,Y., Watanabe,A., Kawashima,K., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Sato,S. (2010) DNA Res. 17 (1), 37-50.