ISWosp5

  • Family IS4
  • Group IS231
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Wolbachia sp.
Wolbachia sp.
DNA section
IS Length : 1435 bp

Ends


IR Length : 18

IRL : CATACGCGTCAAGTTAAGGAAATAAAGGTATGAAAGAGATAGAATAATAA
IRR : CATACGCGTCAAGTTAAGAAGCAAGTGTTAGAAAGTTCAATGAGCTTAGT

Insertion site


Left flankDirect repeatRight flankDR Length
CTGGCCACAGTAAGGAAAACAGTGCAGAT9

DNA sequence

CATACGCGTCAAGTTAAGGAAATAAAGGTATGAAAGAGATAGAATAATAAGGTATAAGTTCTCCCAGATATACTTTTAGTGAGAGAACCAATGAATAAAA
TAACTTGCTTATCAAAAAAGCTCAAAGAATTTTTTAATGAAAAAGCAGATAAAATCTCAATTAGAACAGGGTTCATAAAAAGAAAGAGAAAGCTAAGAGG
TTCATCGTTTATAAAAGCCATGGTCTTGGGAAATATAGGGGTTGATAATTGTAGCATAGAAACAATGTGTCAATTATTAAATGAAGACTCGATAGAGATG
ACAAAACAGGGTTTAGACTTTAGATTTACCGAGGAAGCAGTGGAATTTATGAAAAGGATGTATAATGAATCTTTAATGTTATTTAAAGGTATTTTGCAAA
TTAATTGTAGAATTTTGAAGCAATTTAGAAGTGTTAAGTTATTGGACAGTAGCTATATTAGCCTACCTAATAGTATGGAAAACATGTATAAAGGATATGG
CACAAGCTACAGTGGTTATGAAAGCAATACTAAATCTAGAATAAAATTACAACTAGTTTTTGATTACCTAAATCAAACATTAACCCAACTTAACATAACA
GAGGGAATAAGGTCAGACCAGGGGTATAGAAGGTATTTAAGCAGTATATCAAACAACGATTTGCTAATATCTGACCTGGGTTATTTTGTGCCAAGTTCTT
TTAAGCAACTCAATGAAACAGGAGCTTATTTTATCAGCCGTTATAAATCTGATACCAATATATATGATATAGAAACAAATCAAAAAATAGAGTTATTAGA
ATGTTTAGAGGATAAATTATTTCTAGAAAATGAGGTGCTGTTAGGAAAAGAGACAAAAGTTAAAGTAAGAATTATATGTCAAAAGCTAACTGAAGAACAG
TCCATGGCCAGAAGAAGAAAGGCTAATAGATTAGCAAAATCACATGGGTATACATCTTCTAAAAGGAACCAAAAGTTATTGAATTGGTCAATATTCATAA
CTAATGTTTCAGAGAATAAAATTAGTGCTGAACAGGTATTAACAATTTACAGAGCAAGATGGCAAATTGAACTATTATTCAAATTATATAAGAGCCATAT
AAGACTTGATAAACTGAAAGGAAAGCCATATAGGGTATTATGTGAATTATATGCTAAATTATGTGCAGTTCTTATATTTCATGGAATAGTTGGTTGTACA
GAACTAAAAAAGGACACAGAACTTAGTCTAACAAAGGCATTCATCGAACTAAAAAGAAGAATTAGGGAGTTATTTTTAGCATTAAGCAGTAGAATTAATA
ATTTGAGAATCTTCCTAAAAAAGCTTACCACAGACTGGTCACAATTTTCTGTGAAAGACAGGTATAGAAAAATTAGAGTCTCCACACTAAGCTCATTGAA
CTTTCTAACACTTGCTTCTTAACTTGACGCGTATG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1344 bp447 aa791422+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

VREPMNKITCLSKKLKEFFNEKADKISIRTGFIKRKRKLRGSSFIKAMVLGNIGVDNCSIETMCQLLNEDSIEMTKQGLDFRFTEEAVEFMKRMYNESLM
LFKGILQINCRILKQFRSVKLLDSSYISLPNSMENMYKGYGTSYSGYESNTKSRIKLQLVFDYLNQTLTQLNITEGIRSDQGYRRYLSSISNNDLLISDL
GYFVPSSFKQLNETGAYFISRYKSDTNIYDIETNQKIELLECLEDKLFLENEVLLGKETKVKVRIICQKLTEEQSMARRRKANRLAKSHGYTSSKRNQKL
LNWSIFITNVSENKISAEQVLTIYRARWQIELLFKLYKSHIRLDKLKGKPYRVLCELYAKLCAVLIFHGIVGCTELKKDTELSLTKAFIELKRRIRELFL
ALSSRINNLRIFLKKLTTDWSQFSVKDRYRKIRVSTLSSLNFLTLAS

 

Blast result :
Comments
ISWosp5 is 95% aa similar to ISWen1.
References
1] Jiang M. (2010) Direct submission GenBank.