ISfinder Mirror Site

ISMau1

Family IS5
Group ISL2

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NZ_ADBZ01000055	ND	Micromonospora aurantiaca	Micromonospora aurantiaca ATCC 27029

DNA section

IS Length : 914 bp

Ends

IR Length : 14/17

IRL : GAGCCATTTTCATCGTGATGGTGCAGGTCACGGGTGGCGGGTGAGGCCCG
IRR : GAGCAGTTTCATCCTGCGTGACGCTTGGCTTCGACGTGGTGAAGGACGAG

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GCGGATTATT		ACTGTCGCGA	0

DNA sequence

GAGCCATTTTCATCGTGATGGTGCAGGTCACGGGTGGCGGGTGAGGCCCGGTGTCTACAAAGGACGAGGCTCCTGGTAAGGCAGCAGTCGACCAAGATCC
GATGCCGTAACGGGAGCCTCGCCATGCTGTCTTACCCTGCCGCGATTCCGCTGTCCACCCGGACCCTGAACCACCTCGCCGGCCTCATCCGCAGGCACCG
TCACCAGCACCGATCCCGCTGGCGACGGCTCGGGCCCGGCCGTCAGGCGCTGCTCGCCCTGGCCCACCTGCGCAACGGTGACACCTACACCCGGCTGGCC
GGCGGGTTCGAGATCGGCGTGGCGACCGCCTGGCGGTACGTCCGCGAGGCCGTCGACCTCCTCGCCGCAGCCGCCGACGACCTGTCCGCCGCCATGCGCA
GGATCCGCCGCCTGGCCTATGTCGTCCTCGACGGCACCCTCATCCCGATGGACCGCGTCGCGGGCCAGAAGCCCTACTACTCCGGCAAACACCGCCGTCA
TGGCATGAACGTGCAGGTCATCGCCGACCCGGCCGGTCGGCTCGTCTGGGCCTCGCCCGCGCTCCCCGGCTCCGTCCACGACCTGACCGCTGCCCGCGCG
CGCGACCTGATCCAAGCGTTGAGTAGGGACAACGTGATGACCTTCGTCGACAAGGCGTACCAAGGCGCGGGCGGCAGCATCCGGACACCGTTCAAACGCC
ACCGATACCGGCAGCGGCTGTCACGAGGGCAGAAGGCCGTGAACCGTGCCCACGCCCGGATCCGCGCCATCGGCGAACGCGCCAACGCCACCCTCAAGGG
CTGGAAGATCCTGACCAAACTGCACTGCTGCCCCCGCCGCGCCACCGCGATCGTGCGGGCCACCCTCGTCCTTCACCACGTCGAAGCCAAGCGTCACGCA
GGATGAAACTGCTC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
783 bp	260 aa	124	906	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLSYPAAIPLSTRTLNHLAGLIRRHRHQHRSRWRRLGPGRQALLALAHLRNGDTYTRLAGGFEIGVATAWRYVREAVDLLAAAADDLSAAMRRIRRLAYV
VLDGTLIPMDRVAGQKPYYSGKHRRHGMNVQVIADPAGRLVWASPALPGSVHDLTAARARDLIQALSRDNVMTFVDKAYQGAGGSIRTPFKRHRYRQRLS
RGQKAVNRAHARIRAIGERANATLKGWKILTKLHCCPRRATAIVRATLVLHHVEAKRHAG

Blast result :

Comments

ISMau1 is 85% aa similar to ISSar1.

References

1] ISfinder annotation (2010).
2] Lucas,S., Copeland,A., Lapidus,A., Glavina del Rio,T., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L. and Hirsch,A.M. (2009) Direct submission GenBank.