ISSto15
- Family ISNCY
- Group ISC1217
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_003106 | ND | Sulfolobus tokodaii | Sulfolobus tokodaii str. 7 |
DNA section
IS Length : 1145 bp
Ends
IR Length : 8
IRL : TAGCATTTATAGGAAAATCCTTGCAGTTTAAGGGAACCTTAAAAACTTTT
IRR : TAGCATTTTACGTCTTTTTCCTTCTCTTAAACAGTTTCTTAATCCCACCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCTTAATAAA | ACCGTG | AATAAGCATC | 6 |
DNA sequence
TAGCATTTATAGGAAAATCCTTGCAGTTTAAGGGAACCTTAAAAACTTTTTAAAAATTAGCCAAACAAAATATCGGATGAATACAAACTCATTACTCCAA
GAGTATTACAAGGCACTCCGAGAAGCATTACAACAAATCTTCACAGCCTTGACTAGCGTGAGAAAAGACACACTAACAAGACTAGTGCTAGGAGGAGTTA
TGGGTGGAACAGCAACAGAAATAGCACAAGCAGTAGACATGGACTACGAGACAGTACTAAAAAACCTTGACAAATTGGCAAACATAAACTTGATCAAAAT
AGTAAAAGAAATAGTAAAAGACCACCCAGTACAACTAATAATAGACGACACACACAACCACAAAGCAAGAGCACTACCAGTATCAAGAAACGGAACACAA
GCCTTTTACTGCAGAGAACACAAAAGATACGAACCAGCAATACAACTCCTAATAATAGCAATAAAAGACCTATACACAAACGAAACCTACATTATAACAA
TAATACCATACATACCACAAAAAGTTGCCGAAATACTCAAGGAAAGGGGAGAAAAAGCAGAATACAAAACAAAAATCCAACTATACCTAGAAACACTACC
AACAATCCTAAACGAGTACAACGTTACCACCATCTCATTCGACTCATGGTACGTAAACTCAAAAACCCTACTACCTAACACTATCGGGGAACTCAAGGCA
AACTCACGTGTTGTCGAGGGTGACAGACACGTGCCAGTTGCCGAGTTCCCCGAAGGGGAATACCTAGTAGAATACCTAGGTACCCCCATAAAACTACTCG
TAATAGACAATTATAAAGACATGGGAAAAAGATACTTCTTCTCAACCAACACGAAAGACACACCAGAAGACATAATAACAACATGGGAAAACCGTTGGGA
TATTGAAGTAGTAATTAGGGAGCTAAAGGCTCTAGGCTTGGAGAAGAGCTCTTTCCTCACATGGATTAGGAACAAGGGTTTCATAACCTTGAAAGCCCTC
TCCCTCCTCTTAGTCCTCTCATTTAAGTATTCTCTTGGCTTAAGGTTAGGAGCCAAGAGGATATCAAGGATGATAAAAAGTATTTATCAGTCTTTGGGTG
GGATTAAGAAACTGTTTAAGAGAAGGAAAAAGACGTAAAATGCTA
GAGTATTACAAGGCACTCCGAGAAGCATTACAACAAATCTTCACAGCCTTGACTAGCGTGAGAAAAGACACACTAACAAGACTAGTGCTAGGAGGAGTTA
TGGGTGGAACAGCAACAGAAATAGCACAAGCAGTAGACATGGACTACGAGACAGTACTAAAAAACCTTGACAAATTGGCAAACATAAACTTGATCAAAAT
AGTAAAAGAAATAGTAAAAGACCACCCAGTACAACTAATAATAGACGACACACACAACCACAAAGCAAGAGCACTACCAGTATCAAGAAACGGAACACAA
GCCTTTTACTGCAGAGAACACAAAAGATACGAACCAGCAATACAACTCCTAATAATAGCAATAAAAGACCTATACACAAACGAAACCTACATTATAACAA
TAATACCATACATACCACAAAAAGTTGCCGAAATACTCAAGGAAAGGGGAGAAAAAGCAGAATACAAAACAAAAATCCAACTATACCTAGAAACACTACC
AACAATCCTAAACGAGTACAACGTTACCACCATCTCATTCGACTCATGGTACGTAAACTCAAAAACCCTACTACCTAACACTATCGGGGAACTCAAGGCA
AACTCACGTGTTGTCGAGGGTGACAGACACGTGCCAGTTGCCGAGTTCCCCGAAGGGGAATACCTAGTAGAATACCTAGGTACCCCCATAAAACTACTCG
TAATAGACAATTATAAAGACATGGGAAAAAGATACTTCTTCTCAACCAACACGAAAGACACACCAGAAGACATAATAACAACATGGGAAAACCGTTGGGA
TATTGAAGTAGTAATTAGGGAGCTAAAGGCTCTAGGCTTGGAGAAGAGCTCTTTCCTCACATGGATTAGGAACAAGGGTTTCATAACCTTGAAAGCCCTC
TCCCTCCTCTTAGTCCTCTCATTTAAGTATTCTCTTGGCTTAAGGTTAGGAGCCAAGAGGATATCAAGGATGATAAAAAGTATTTATCAGTCTTTGGGTG
GGATTAAGAAACTGTTTAAGAGAAGGAAAAAGACGTAAAATGCTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1062 bp | 353 aa | 77 | 1138 | + | No |
Chemistry : Unknow
ORF sequence :
MNTNSLLQEYYKALREALQQIFTALTSVRKDTLTRLVLGGVMGGTATEIAQAVDMDYETVLKNLDKLANINLIKIVKEIVKDHPVQLIIDDTHNHKARAL
PVSRNGTQAFYCREHKRYEPAIQLLIIAIKDLYTNETYIITIIPYIPQKVAEILKERGEKAEYKTKIQLYLETLPTILNEYNVTTISFDSWYVNSKTLLP
NTIGELKANSRVVEGDRHVPVAEFPEGEYLVEYLGTPIKLLVIDNYKDMGKRYFFSTNTKDTPEDIITTWENRWDIEVVIRELKALGLEKSSFLTWIRNK
GFITLKALSLLLVLSFKYSLGLRLGAKRISRMIKSIYQSLGGIKKLFKRRKKT
PVSRNGTQAFYCREHKRYEPAIQLLIIAIKDLYTNETYIITIIPYIPQKVAEILKERGEKAEYKTKIQLYLETLPTILNEYNVTTISFDSWYVNSKTLLP
NTIGELKANSRVVEGDRHVPVAEFPEGEYLVEYLGTPIKLLVIDNYKDMGKRYFFSTNTKDTPEDIITTWENRWDIEVVIRELKALGLEKSSFLTWIRNK
GFITLKALSLLLVLSFKYSLGLRLGAKRISRMIKSIYQSLGGIKKLFKRRKKT
Blast result :
Comments
ISSto15 is 97% aa similar to ISSto10.
References
1] ISfinder annotation (2010)