ISEnfa2
- Family IS1182
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NZ_GG692850 | ND | Enterococcus faecalis | Enterococcus faecalis T2 |
DNA section
IS Length : 1536 bp
Ends
IR Length : 12/15
IRL : CAGAACGTAGACAAAGTATCAGATTTTTGATACTTCGTCTTTTTTTCTTG
IRR : CAGATTGAAGACAAACTAATTACTCATAAAGAGTGATTGGTTTGTTTTTT
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CATATATAAA | AAAGTAGCTGCTAAAGATAGCAGCTACTTT | TTAGCGTTAA | 30 |
DNA sequence
CAGAACGTAGACAAAGTATCAGATTTTTGATACTTCGTCTTTTTTTCTTGGTAAAATAGAAAAAAGGAGTTGATTTCAATGTTGAAAAAACAAGATATGA
GTAAACGTGATCAAATTGGCTTTTATTCTCTAGAAGATTTAGTTCCCAAGGAACATCTATTGAGAGATATTGATAAATATGTAGATTTTGATTTTATCTA
TAAATTAGTTGAAGATAAATATGATGAGGCAAACGGTCGTCCTAGTATAGATCCTGTTCTGTTAATTAAACTTCCATTGATTCAGTATCTTTATGGCATA
AAAAGTATGAGGCAAACTATTAAAGATGTTGAGGTTAATATGGCTTACCGTTGGTTTTTAGGTTTAGATATCCAAGATACTGTTCCTCATTTCTCAACCT
TCGGCAAAAATTATTCTAGAAGATTTCGTGGTACAGATATCTTTGAACAAATATTTTACGGCATATTAGAACAGTGCATTGAAGCTAAATTAGTGGATAA
CTCTGAAATATTTATTGATGGTACTCATATAAAGGCTCATGCCAATAATAAAAAATATGAAAGTAAAGAAGTTACTGAAGAAACTCTTTTTTATGTAGAA
TCATTACAAAAAGAAGTTGAAATAGATAGAGAAACAAGATTAAAAAAGCCCTTAAAAAGAAGAAAGGAAAGTGAAATTCAAGTAAAAAATAAAAAGATTA
GTAAAACAGATGATGAGAGTGGTTGGTTCCATAAAGGAGAACATAAGCAGGTTTTTGCTTATGCCACACAAGTGGCATGTGACAAGAATGGTTGGATTTT
AGGATACACAACTCATCCTGGTAATCAGCACGATAGTCGAACATTCATTGATATCTATAATAAATTACAAAGCCTCTTTACCTTAGATAAATTAGTAATG
GACGCTGGATACAAAACACCAGGTATAGCTCATTTATTATTTCAAAATAATTTAACACCTATTTTTCCATATAAAAGACCTATGACCAAAAAAGAATTTT
ATCAAAAATATGATTATGTTTATGATGAATATTACGATCAATATATCTGTCCTAATATGAAAATTTTAAGCTATACAACAACTAATAGAGATGGATATCG
TGAATATAAAAGTGATACTGTTGACTGTAGTCGATGCCCTTTGATTGCTTACTGTACTGAGTCAAAAGAAAAGAGAAAATTAATTCAACGACATTTATGG
GAAAACGATATGGAACGTTGCGAAGATATACGTCATTCTCTTGGAATGAAAGTTATATACAATAATCGGAAACAAACAATTGAGCGATTATTTGGAACGG
CAAAAGAATTTCATGGATTGCGCTATACTAATTTAATTGGGAAAGAAAAAATGCACATGAAAATTGGGCTCACTTTCGCATGCCTCAACATTAAAAAATT
AACAAAAATGCTTAAATTAAGAGACCTAGAGGGCTCTATTTTTTTATCTATTTTTAGATTTTTATCAAAAATAGTAACGAGATACAAAAAAACAAACCAA
TCACTCTTTATGAGTAATTAGTTTGTCTTCAATCTG
GTAAACGTGATCAAATTGGCTTTTATTCTCTAGAAGATTTAGTTCCCAAGGAACATCTATTGAGAGATATTGATAAATATGTAGATTTTGATTTTATCTA
TAAATTAGTTGAAGATAAATATGATGAGGCAAACGGTCGTCCTAGTATAGATCCTGTTCTGTTAATTAAACTTCCATTGATTCAGTATCTTTATGGCATA
AAAAGTATGAGGCAAACTATTAAAGATGTTGAGGTTAATATGGCTTACCGTTGGTTTTTAGGTTTAGATATCCAAGATACTGTTCCTCATTTCTCAACCT
TCGGCAAAAATTATTCTAGAAGATTTCGTGGTACAGATATCTTTGAACAAATATTTTACGGCATATTAGAACAGTGCATTGAAGCTAAATTAGTGGATAA
CTCTGAAATATTTATTGATGGTACTCATATAAAGGCTCATGCCAATAATAAAAAATATGAAAGTAAAGAAGTTACTGAAGAAACTCTTTTTTATGTAGAA
TCATTACAAAAAGAAGTTGAAATAGATAGAGAAACAAGATTAAAAAAGCCCTTAAAAAGAAGAAAGGAAAGTGAAATTCAAGTAAAAAATAAAAAGATTA
GTAAAACAGATGATGAGAGTGGTTGGTTCCATAAAGGAGAACATAAGCAGGTTTTTGCTTATGCCACACAAGTGGCATGTGACAAGAATGGTTGGATTTT
AGGATACACAACTCATCCTGGTAATCAGCACGATAGTCGAACATTCATTGATATCTATAATAAATTACAAAGCCTCTTTACCTTAGATAAATTAGTAATG
GACGCTGGATACAAAACACCAGGTATAGCTCATTTATTATTTCAAAATAATTTAACACCTATTTTTCCATATAAAAGACCTATGACCAAAAAAGAATTTT
ATCAAAAATATGATTATGTTTATGATGAATATTACGATCAATATATCTGTCCTAATATGAAAATTTTAAGCTATACAACAACTAATAGAGATGGATATCG
TGAATATAAAAGTGATACTGTTGACTGTAGTCGATGCCCTTTGATTGCTTACTGTACTGAGTCAAAAGAAAAGAGAAAATTAATTCAACGACATTTATGG
GAAAACGATATGGAACGTTGCGAAGATATACGTCATTCTCTTGGAATGAAAGTTATATACAATAATCGGAAACAAACAATTGAGCGATTATTTGGAACGG
CAAAAGAATTTCATGGATTGCGCTATACTAATTTAATTGGGAAAGAAAAAATGCACATGAAAATTGGGCTCACTTTCGCATGCCTCAACATTAAAAAATT
AACAAAAATGCTTAAATTAAGAGACCTAGAGGGCTCTATTTTTTTATCTATTTTTAGATTTTTATCAAAAATAGTAACGAGATACAAAAAAACAAACCAA
TCACTCTTTATGAGTAATTAGTTTGTCTTCAATCTG
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1452 bp | 483 aa | 70 | 1521 | + | No |
Chemistry : DDE
ORF sequence :
MISMLKKQDMSKRDQIGFYSLEDLVPKEHLLRDIDKYVDFDFIYKLVEDKYDEANGRPSIDPVLLIKLPLIQYLYGIKSMRQTIKDVEVNMAYRWFLGLD
IQDTVPHFSTFGKNYSRRFRGTDIFEQIFYGILEQCIEAKLVDNSEIFIDGTHIKAHANNKKYESKEVTEETLFYVESLQKEVEIDRETRLKKPLKRRKE
SEIQVKNKKISKTDDESGWFHKGEHKQVFAYATQVACDKNGWILGYTTHPGNQHDSRTFIDIYNKLQSLFTLDKLVMDAGYKTPGIAHLLFQNNLTPIFP
YKRPMTKKEFYQKYDYVYDEYYDQYICPNMKILSYTTTNRDGYREYKSDTVDCSRCPLIAYCTESKEKRKLIQRHLWENDMERCEDIRHSLGMKVIYNNR
KQTIERLFGTAKEFHGLRYTNLIGKEKMHMKIGLTFACLNIKKLTKMLKLRDLEGSIFLSIFRFLSKIVTRYKKTNQSLFMSN
IQDTVPHFSTFGKNYSRRFRGTDIFEQIFYGILEQCIEAKLVDNSEIFIDGTHIKAHANNKKYESKEVTEETLFYVESLQKEVEIDRETRLKKPLKRRKE
SEIQVKNKKISKTDDESGWFHKGEHKQVFAYATQVACDKNGWILGYTTHPGNQHDSRTFIDIYNKLQSLFTLDKLVMDAGYKTPGIAHLLFQNNLTPIFP
YKRPMTKKEFYQKYDYVYDEYYDQYICPNMKILSYTTTNRDGYREYKSDTVDCSRCPLIAYCTESKEKRKLIQRHLWENDMERCEDIRHSLGMKVIYNNR
KQTIERLFGTAKEFHGLRYTNLIGKEKMHMKIGLTFACLNIKKLTKMLKLRDLEGSIFLSIFRFLSKIVTRYKKTNQSLFMSN
Blast result :
Comments
ISEnfa2 is 76% aa similar to ISClbo1.
References
1] ISfinder annotation (2010)
2] Feldgarden,M., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B.,
Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Gilmore,M., Manson,J., Palmer,K., Carniol,K., Lander,E., Nusbaum,C., Galagan,J. and Birren,B. (2009) Direct submission GenBank.
2] Feldgarden,M., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B.,
Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Gilmore,M., Manson,J., Palmer,K., Carniol,K., Lander,E., Nusbaum,C., Galagan,J. and Birren,B. (2009) Direct submission GenBank.