ISBsp5
- Family IS1182
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NZ_AAXV01000011 | ND | Bacillus sp. | Bacillus sp. B14905 |
DNA section
IS Length : 1744 bp
Ends
IR Length : 15
IRL : CAGACTGTAGACAAACTCAAAAAATTTGAGAGTTTGTCTACAGTCTTTTT
IRR : CAGACTGTAGACAAAAGCTATCGAGAAGTTCATTCTCGATGGCTTTTGTC
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CAGACACTCCTTGAGTGTGCTGGTCATTG | AAATGACCAGACACTCCTTGAGTGTGCTG | 0 |
DNA sequence
CAGACTGTAGACAAACTCAAAAAATTTGAGAGTTTGTCTACAGTCTTTTTTCTTTTACAATGAAATAAAGTAAAGCCGTTGATTTCCACTACGGGCGGAC
GCTTTCCGCGGGCGGGGTCGAGCTGCTTCCCTCGCTCCGCTCAGTCCAGGATCTCGACTTTCCCGCTTTTCCCGCAGGAGTCGCCGCCCTTCGTTCCAAT
CAACTTCTACATAAAGTACTCCATCTACATAGGGTGTTGAAAAGTAAATTTTTGAGGTGATAAACGATGATGACGAAGAATCAAACCAATGAACGAGAAC
AATTAGAAATGTTAACGATTGATCAATTAGTTCCCAACGATCATTTAGTGCGAAAACTAGAGGCTGCTATTGATTTTTCATTTATCTATCCTTTAGTAGA
ACATCTCTATTCACCTAATGGGCGTCCTAGTATTGATCCTGTTGTTCTCTTTAAAATGACGTTTATTCAGTACGTTTTTGGTATTCGGTCCATGCGTCAA
ACCATCAAAGAAATTGAAACGAATATGGCGTATCGTTGGTTTTTAGGATTTGGCTTCCATACAGAAGTCCCGCATTTCTCTACCTTCGGTAAAAATTATG
TCCGTCGCTTTCAAGACACCGATATATTTGAACAGATATTCTATCGTATTTTAAAAGAGATTATGCATCAAGGACTCCTCCATGCAGACCATTTATTTAT
CGATTCCACGCATGTGAAAGCGAGTGCGAATAAACGGAAGTATGATAAAAAGGTTGTGCGAAAAGAAACACGGGCTTATGAAGAAAAACTTCAATTAGAG
TTAAATATAGATCGTGAAGAACACGGAAAAAAGCCCTTTCCCCCGGAGAAGTTTGAAAAGGAAGAATGGAAAGAAATAAAGGAAAGTACGACAGATCCTG
AAAGTGGCTATTACGTGAAGGATGAACGTACAAAACAGTTTGCATATTCCTTTCATGCTGCGACAGATGAAAAGGGCTTTGTCTTAGGTGCCATTGTGAC
TCCGGGAAATGTACACGATAGCCATGTATTGCAGCCACTTGTTGAAAGGGTCATTCAAAACGTTCAAAAACCATTAGCTGTTGCGGCAGATGCAGCCTAT
AAAACACCAGCGATTACGAACTTTTTGTTAGAGAATAAAATGTTGCCTGTTCTTCCGTATACACGTCCTAAAACGAAAGATGGATTCTTCCGAAAGCACG
AGTATACATATGACGAGCACTATAATTGTTATCTTTGCCCACAAGGGCAGATATTGAAGTATGCGACAACGACGAAGGAAGGTTATCGCCAATATAAATC
GAATCCTTTGATTTGTGCGAAGTGTCCAAGCCTTTCCCAATGTACAGAAAGTAAGCATCATCAAAAACTCATTCAACGTCATATTTGGGAGTCGTATGTG
GAGGAAGCTGAACATTTACGCCATTCCTATGACATCAAACAGATTTATGCAAAGCGCAAAGAAACGATTGAGCGTGTCTTTGCGGATGCAAAAGAAAAGC
ATGGTATGCGATGGACAACCTTAAGAGGTCTAAAAAAATTGTCCATGCAGGCGATGCTTACTTTTGCTGCCATGAATTTAAAGAAACTAGCTACTTGGAC
GTGGCAAGTAGCTTAAAAGAGCAACTATACTCGAAGAGTAAGTTGGATTTGGTAGTATATTACCAAATGTTAAAGATAAAATAGGAAGAAAAATGACAAA
AGCCATCGAGAATGAACTTCTCGATAGCTTTTGTCTACAGTCTG
GCTTTCCGCGGGCGGGGTCGAGCTGCTTCCCTCGCTCCGCTCAGTCCAGGATCTCGACTTTCCCGCTTTTCCCGCAGGAGTCGCCGCCCTTCGTTCCAAT
CAACTTCTACATAAAGTACTCCATCTACATAGGGTGTTGAAAAGTAAATTTTTGAGGTGATAAACGATGATGACGAAGAATCAAACCAATGAACGAGAAC
AATTAGAAATGTTAACGATTGATCAATTAGTTCCCAACGATCATTTAGTGCGAAAACTAGAGGCTGCTATTGATTTTTCATTTATCTATCCTTTAGTAGA
ACATCTCTATTCACCTAATGGGCGTCCTAGTATTGATCCTGTTGTTCTCTTTAAAATGACGTTTATTCAGTACGTTTTTGGTATTCGGTCCATGCGTCAA
ACCATCAAAGAAATTGAAACGAATATGGCGTATCGTTGGTTTTTAGGATTTGGCTTCCATACAGAAGTCCCGCATTTCTCTACCTTCGGTAAAAATTATG
TCCGTCGCTTTCAAGACACCGATATATTTGAACAGATATTCTATCGTATTTTAAAAGAGATTATGCATCAAGGACTCCTCCATGCAGACCATTTATTTAT
CGATTCCACGCATGTGAAAGCGAGTGCGAATAAACGGAAGTATGATAAAAAGGTTGTGCGAAAAGAAACACGGGCTTATGAAGAAAAACTTCAATTAGAG
TTAAATATAGATCGTGAAGAACACGGAAAAAAGCCCTTTCCCCCGGAGAAGTTTGAAAAGGAAGAATGGAAAGAAATAAAGGAAAGTACGACAGATCCTG
AAAGTGGCTATTACGTGAAGGATGAACGTACAAAACAGTTTGCATATTCCTTTCATGCTGCGACAGATGAAAAGGGCTTTGTCTTAGGTGCCATTGTGAC
TCCGGGAAATGTACACGATAGCCATGTATTGCAGCCACTTGTTGAAAGGGTCATTCAAAACGTTCAAAAACCATTAGCTGTTGCGGCAGATGCAGCCTAT
AAAACACCAGCGATTACGAACTTTTTGTTAGAGAATAAAATGTTGCCTGTTCTTCCGTATACACGTCCTAAAACGAAAGATGGATTCTTCCGAAAGCACG
AGTATACATATGACGAGCACTATAATTGTTATCTTTGCCCACAAGGGCAGATATTGAAGTATGCGACAACGACGAAGGAAGGTTATCGCCAATATAAATC
GAATCCTTTGATTTGTGCGAAGTGTCCAAGCCTTTCCCAATGTACAGAAAGTAAGCATCATCAAAAACTCATTCAACGTCATATTTGGGAGTCGTATGTG
GAGGAAGCTGAACATTTACGCCATTCCTATGACATCAAACAGATTTATGCAAAGCGCAAAGAAACGATTGAGCGTGTCTTTGCGGATGCAAAAGAAAAGC
ATGGTATGCGATGGACAACCTTAAGAGGTCTAAAAAAATTGTCCATGCAGGCGATGCTTACTTTTGCTGCCATGAATTTAAAGAAACTAGCTACTTGGAC
GTGGCAAGTAGCTTAAAAGAGCAACTATACTCGAAGAGTAAGTTGGATTTGGTAGTATATTACCAAATGTTAAAGATAAAATAGGAAGAAAAATGACAAA
AGCCATCGAGAATGAACTTCTCGATAGCTTTTGTCTACAGTCTG
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1350 bp | 449 aa | 267 | 1616 | + | No |
Chemistry : DDE
ORF sequence :
MMTKNQTNEREQLEMLTIDQLVPNDHLVRKLEAAIDFSFIYPLVEHLYSPNGRPSIDPVVLFKMTFIQYVFGIRSMRQTIKEIETNMAYRWFLGFGFHTE
VPHFSTFGKNYVRRFQDTDIFEQIFYRILKEIMHQGLLHADHLFIDSTHVKASANKRKYDKKVVRKETRAYEEKLQLELNIDREEHGKKPFPPEKFEKEE
WKEIKESTTDPESGYYVKDERTKQFAYSFHAATDEKGFVLGAIVTPGNVHDSHVLQPLVERVIQNVQKPLAVAADAAYKTPAITNFLLENKMLPVLPYTR
PKTKDGFFRKHEYTYDEHYNCYLCPQGQILKYATTTKEGYRQYKSNPLICAKCPSLSQCTESKHHQKLIQRHIWESYVEEAEHLRHSYDIKQIYAKRKET
IERVFADAKEKHGMRWTTLRGLKKLSMQAMLTFAAMNLKKLATWTWQVA
VPHFSTFGKNYVRRFQDTDIFEQIFYRILKEIMHQGLLHADHLFIDSTHVKASANKRKYDKKVVRKETRAYEEKLQLELNIDREEHGKKPFPPEKFEKEE
WKEIKESTTDPESGYYVKDERTKQFAYSFHAATDEKGFVLGAIVTPGNVHDSHVLQPLVERVIQNVQKPLAVAADAAYKTPAITNFLLENKMLPVLPYTR
PKTKDGFFRKHEYTYDEHYNCYLCPQGQILKYATTTKEGYRQYKSNPLICAKCPSLSQCTESKHHQKLIQRHIWESYVEEAEHLRHSYDIKQIYAKRKET
IERVFADAKEKHGMRWTTLRGLKKLSMQAMLTFAAMNLKKLATWTWQVA
Blast result :
Comments
ISBsp5 is 80% aa similar to ISBpu1.
References
1] ISfinder annotation (2010)
2] Edwards,R., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. (2006) Direct submission.
2] Edwards,R., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M. and Venter,J.C. (2006) Direct submission.