ISBbr1
- Family IS1182
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_012491 | ND | Brevibacillus brevis | Brevibacillus brevis NBRC 100599 |
DNA section
IS Length : 1684 bp
Ends
IR Length : 15
IRL : GAGAGCCGTGCAAAACGACTCCTATAATATGTAAAAAGACTGATCCAGTA
IRR : GAGAGCCGTGCAAAATACTCTCTATCTTGAAAAGAGACGTTCTCTTTTGG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| AAGAGGTCTC | CAAACC | GGAGACTCTT | 6 |
DNA sequence
GAGAGCCGTGCAAAACGACTCCTATAATATGTAAAAAGACTGATCCAGTACCGTTAGGTACTGGGTCTCGTTGTATAATAAACATAAAACGAAAGAAGCT
GGGACTAGTGCTACAGCCTGCCAAACAATTGACGGCGTCCTTCCATGCCGAATTATACAAACTCATTCCAGGAGATCATCCATTGTGTAAAATAAATGAA
GTCGTCGACTTCACGTTCATTCATGATCTGGTTCGTTCTTCGTACTGTGAATATTACGGTAGACCTGCCAACGAGCCAGAGCTTCTGTTTCGTTTGTTAT
TCTTGCAAGTTCTGTACAATCTTTCGGATGAGCGCATGATTCAAGAAGCTCAGGTGAATCTTGCTTACAAGTGGTTTATTGGCCTTAATCCAGAAGACAC
GCTACCAGCCCCTTCTCAATTATCCCGATTTCGTAACCATCGATTGGGAGCAGCGGGTGTGGATGAGGTGCTTCGATCAGTTGTGCGCCAGTGCATCGAG
AAAGGACTCGTCAAGTCGAAGACGATTATCATGGATTCTACTCATACATTGGCAGCTTCGCAAAAACAAAAGCCACTTGGCGTTTTACGAGATGCGGCAA
AACGTCTATTTCGTGTCGTTGTAAAAAAGCATTCCAAACTTGAAAAGAAACTTCCTCGGATGCCAGTGATAAAGAAAGAACAGGAAAATGCGGAAAAAGT
CATGCTACATTACTTAGCGGAGCTGGGAGAAGCTGTCGAGACGCTAATACCTGATCATGAGGGTTCTATCTCAGAAAAACTTCAGATCGCCAAGAGGATT
GTAGAAGACGAGCGCCTTCTTTCCCAAAAAGGGATTCTGTCGGCTATTGATCCAGACGCACGCTTTGGATGGAAAAGCTATACGAAATCTTTTTTTGGTT
ACAAAGAACATATCGCCATGACGGAGGAAGAGATCATTACGGCTGTAGAAGTTACTGGGGGAAGTTCGGATGATGGAAAGCAATTCAAAGAGCTTCTAAG
TCAAACGATATCCACAGGAATAGAAGTCCATGAAATCATTGCTGACACTGCATATTCAGGTAAAGACAACTTAGCTGAAATGAAATCTAAAAAGATTCAA
CCCGTAGTTCCTTTAAACCCTGTCGTCCATAATGGCGGATCAAGGCAAGAGGGTTTTACATACAACAAAGATGCAGATTTTGTTATTTGTCCGGCAGGAC
AAAACAGTGTCCGTAAAGCTGTGCAAGGCAGCAAAAAAAGTGGCGATAGTCGTTCTCTCGTGTTCTACTTTGATATACACAAATGCACAGCATGTCCGCT
GAAAGAAGGCTGTTTAAAACCGGGTGCAAAGAACAAGACCTATTCCTTCAGGATTATGGCGGAACATTACAAGGAGCATATCGAATTTGAGAACAGCGAA
GTGTTCCAAGAGCGTATCCGTCGTAGACCGATTATTGAACATAAAAATGCTGAGTTAAAAAGGTATCATGGATTAACCAGGGCCAAGTACCGTGGTCTCT
TTCGTATGCAAATCCAAGCCATATTAACTGCCTTTACAGTAAATGTAAAGCGAATGATAAAACTCCAAGCCAAAATGGAGGCCACCTCAGCATGAGGTAG
CCTCCATTTTTTAGGTTCTACGGACCGAAAATTTCCAAAAGAGAACGTCTCTTTTCAAGATAGAGAGTATTTTGCACGGCTCTC
GGGACTAGTGCTACAGCCTGCCAAACAATTGACGGCGTCCTTCCATGCCGAATTATACAAACTCATTCCAGGAGATCATCCATTGTGTAAAATAAATGAA
GTCGTCGACTTCACGTTCATTCATGATCTGGTTCGTTCTTCGTACTGTGAATATTACGGTAGACCTGCCAACGAGCCAGAGCTTCTGTTTCGTTTGTTAT
TCTTGCAAGTTCTGTACAATCTTTCGGATGAGCGCATGATTCAAGAAGCTCAGGTGAATCTTGCTTACAAGTGGTTTATTGGCCTTAATCCAGAAGACAC
GCTACCAGCCCCTTCTCAATTATCCCGATTTCGTAACCATCGATTGGGAGCAGCGGGTGTGGATGAGGTGCTTCGATCAGTTGTGCGCCAGTGCATCGAG
AAAGGACTCGTCAAGTCGAAGACGATTATCATGGATTCTACTCATACATTGGCAGCTTCGCAAAAACAAAAGCCACTTGGCGTTTTACGAGATGCGGCAA
AACGTCTATTTCGTGTCGTTGTAAAAAAGCATTCCAAACTTGAAAAGAAACTTCCTCGGATGCCAGTGATAAAGAAAGAACAGGAAAATGCGGAAAAAGT
CATGCTACATTACTTAGCGGAGCTGGGAGAAGCTGTCGAGACGCTAATACCTGATCATGAGGGTTCTATCTCAGAAAAACTTCAGATCGCCAAGAGGATT
GTAGAAGACGAGCGCCTTCTTTCCCAAAAAGGGATTCTGTCGGCTATTGATCCAGACGCACGCTTTGGATGGAAAAGCTATACGAAATCTTTTTTTGGTT
ACAAAGAACATATCGCCATGACGGAGGAAGAGATCATTACGGCTGTAGAAGTTACTGGGGGAAGTTCGGATGATGGAAAGCAATTCAAAGAGCTTCTAAG
TCAAACGATATCCACAGGAATAGAAGTCCATGAAATCATTGCTGACACTGCATATTCAGGTAAAGACAACTTAGCTGAAATGAAATCTAAAAAGATTCAA
CCCGTAGTTCCTTTAAACCCTGTCGTCCATAATGGCGGATCAAGGCAAGAGGGTTTTACATACAACAAAGATGCAGATTTTGTTATTTGTCCGGCAGGAC
AAAACAGTGTCCGTAAAGCTGTGCAAGGCAGCAAAAAAAGTGGCGATAGTCGTTCTCTCGTGTTCTACTTTGATATACACAAATGCACAGCATGTCCGCT
GAAAGAAGGCTGTTTAAAACCGGGTGCAAAGAACAAGACCTATTCCTTCAGGATTATGGCGGAACATTACAAGGAGCATATCGAATTTGAGAACAGCGAA
GTGTTCCAAGAGCGTATCCGTCGTAGACCGATTATTGAACATAAAAATGCTGAGTTAAAAAGGTATCATGGATTAACCAGGGCCAAGTACCGTGGTCTCT
TTCGTATGCAAATCCAAGCCATATTAACTGCCTTTACAGTAAATGTAAAGCGAATGATAAAACTCCAAGCCAAAATGGAGGCCACCTCAGCATGAGGTAG
CCTCCATTTTTTAGGTTCTACGGACCGAAAATTTCCAAAAGAGAACGTCTCTTTTCAAGATAGAGAGTATTTTGCACGGCTCTC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1413 bp | 470 aa | 183 | 1595 | + | No |
Chemistry : DDE
ORF sequence :
MCKINEVVDFTFIHDLVRSSYCEYYGRPANEPELLFRLLFLQVLYNLSDERMIQEAQVNLAYKWFIGLNPEDTLPAPSQLSRFRNHRLGAAGVDEVLRSV
VRQCIEKGLVKSKTIIMDSTHTLAASQKQKPLGVLRDAAKRLFRVVVKKHSKLEKKLPRMPVIKKEQENAEKVMLHYLAELGEAVETLIPDHEGSISEKL
QIAKRIVEDERLLSQKGILSAIDPDARFGWKSYTKSFFGYKEHIAMTEEEIITAVEVTGGSSDDGKQFKELLSQTISTGIEVHEIIADTAYSGKDNLAEM
KSKKIQPVVPLNPVVHNGGSRQEGFTYNKDADFVICPAGQNSVRKAVQGSKKSGDSRSLVFYFDIHKCTACPLKEGCLKPGAKNKTYSFRIMAEHYKEHI
EFENSEVFQERIRRRPIIEHKNAELKRYHGLTRAKYRGLFRMQIQAILTAFTVNVKRMIKLQAKMEATSA
VRQCIEKGLVKSKTIIMDSTHTLAASQKQKPLGVLRDAAKRLFRVVVKKHSKLEKKLPRMPVIKKEQENAEKVMLHYLAELGEAVETLIPDHEGSISEKL
QIAKRIVEDERLLSQKGILSAIDPDARFGWKSYTKSFFGYKEHIAMTEEEIITAVEVTGGSSDDGKQFKELLSQTISTGIEVHEIIADTAYSGKDNLAEM
KSKKIQPVVPLNPVVHNGGSRQEGFTYNKDADFVICPAGQNSVRKAVQGSKKSGDSRSLVFYFDIHKCTACPLKEGCLKPGAKNKTYSFRIMAEHYKEHI
EFENSEVFQERIRRRPIIEHKNAELKRYHGLTRAKYRGLFRMQIQAILTAFTVNVKRMIKLQAKMEATSA
Blast result :
Comments
ISbbr1 is 70% aa similar to ISStau7.
References
1] ISfinder annotation (2010)
2] Hosoyama,A., Yamada,R., Hongo,Y., Terui,Y., Ankai,A., Masuyama,W., Sekiguchi,M., Takeda,T., Asano,K., Ohji,S., Ichikawa,N., Narita,S., Aoki,N., Miura,H., Matsushita,S., Sekigawa,T., Yamagata,H., Yoshikawa,H., Udaka,S., Tanikawa,S. and Fujita,N. (2005) Direct submission GenBank.
2] Hosoyama,A., Yamada,R., Hongo,Y., Terui,Y., Ankai,A., Masuyama,W., Sekiguchi,M., Takeda,T., Asano,K., Ohji,S., Ichikawa,N., Narita,S., Aoki,N., Miura,H., Matsushita,S., Sekigawa,T., Yamagata,H., Yoshikawa,H., Udaka,S., Tanikawa,S. and Fujita,N. (2005) Direct submission GenBank.