ISNpu13
- Family Tn3
- Group
Isoform Synonym(s) TnNpu13
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010633 | ND | Nostoc punctiforme | Nostoc punctiforme PCC 73102 plasmid pNPUN04 |
DNA section
IS Length : 4823 bp
Ends
IR Length : 49
IRL : GGGGTAAATATAGCGAAGCTGTCACCAGGGGCAAGATAGGCTGAAAGTAT
IRR : GGGGTAAATATAGCGAAGCTGTCACCAGGGGCAAGATAGGCTGAAAGTAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCCTGAACCCCCCCCGC | AATAC | GGAAAGTGAAAAGAGGGGTG | 5 |
DNA sequence
GGGGTAAATATAGCGAAGCTGTCACCAGGGGCAAGATAGGCTGAAAGTATTGTGGAGTCTGGGTTTGAGAAAAAGAGTTGATTATTGGATTTTAGCGGTT
TTGACAGGCGTTTTATAAGCACAGCCACAAATTGGACAAAATCGGTGTCTCAAAGACAACACCAACTCACCGCAATTCGCACAGTTAGCTCGAATCGGTG
TACCGCAGAGATAACAAAACTTGGCTTTGATATGACTCCACATAGGGTCAACCGCCGCGCCAGGATTCCAACATTGGGGACAAAACTTAACCCCTCTAAC
CTGAGATACTTCCTCACCCTTGATCACAGCATCAAAATATTCTTGAGGTACGCCAAGTGCGATCGCTAACCCTTGAAGTGTCCTACGATTAATTTTAAGC
GTAAGTCCTCGCTCGATTTTCCCGACAGAGCGTCCATGTATACCAGCAGCATCCGCCAACTCAGACTGAGTTAAATTGAGTTTCTTCCTGACCCGTGACA
CGTAACTAGCAAGGGATTCATCGCTATTGGGAGTTTTAAAAGTATCCATAAAAAGCTCAGGGCTAACTCATAAAAAGATATATAATTTATCAATAAAAAA
CCAAGCGAGAGAATACAGAAACAACCGTGAAATCGGCTGTAACTTTAGCCACTGTCACGACCGAATTTCTAGAGCGTCCTGGTCTAGCACCAAGTACTAG
AGAAACCTATGAACTGACCCTCGGACTTTTACTGCAAAAGTATGGAAGTTGGTCAATAGAAATTATCAGTAAGCAAACATTAGTTGAGTATCTAAATAAT
CTCAGTCATTTAAAATACACAACACACCACAAGCATCAAGCAATATTACAAAGTTTGCTTAACTTTGCAGTAGAACAAGGGTATATAAAATCCAACCCTA
TCCGGGGACTAAAACAACGTCTACCTGAAAGAGAGAAAGGCGAACATAAAAGCGACGAGACAATAAGATATCTAACACAATCACAACTAAATATACTATA
TTCTGCCGTAAAAGATGACTTACGTCTAAGTACGATAGTTCATTTACTGCATCGCACAGGATGCAGAATAGGAGAGCTTTTAGCCCTAAACATAGATTCT
GTAGATATCAAGAACCAGAAATTTCAAGTATTAGGTAAAGGCAACAAACAACGCTGGTGTTTTTACAGTGATGACGCAGCCTCAATGCTTGCTAAATACT
TGAAATACTCACGGCATCAAAATACGAATGCCTTGTTTACAGCACAACATCCAGTTACCCGAAAAGTAAGTAGAATCAGCTACCATACATTGCATGATTA
TTGGCGGGAGACAACCAATAAGTATCCACACCTTCAAGGAGTTCGCATTCACGATTTACGACATACATTTGCTACAGAACGAGTGGGGTTAATCAGTATT
GAGGAATTATGCTCATTAATGGGACATGAAAGCATTCAAACAACTTTACGTTACGCTAAAGTCACCTCACAGAAATCAGAATCAGCTGCACGTCATGCCT
TGAATATACTGATTAATTCCGACCAAAAAGCTGACCTTTAGGGCAATTATATAGAATCACTCAGTTCCAGTATGTTTTTCATCGAGAAACAGCATTTTAT
CTCAGTTAAAGATTGTTACCCCAAAGAAGATAGAATACTGTTTGGTTGAAGAGTGAGACTTAATGAAAAAAACCTGGCAGCCAGAAGAATTAGTAGAGTA
TTGGACGCTACTCCCTCTTGAATTAGCACTACTGAATCAGAAAAACGACGAAAATCGGTTAGGTTTTGCTATATTGCTCAAGTTTTTTGAGATTTATGCC
AGATTTCCTGAGAATAATCAAGAAATCTCCCAAAATGTTGTTGATTATGTTGCCAAACTTTTAGATATTTCCCCCCAAAAGTACTCTTACTACGATTGGC
AAGGACGCTCCATAAAATATCATCGCGCTCAAATTAGAGAATTCTTTGGATTTCAAGAAACCAAAGTTAGTGATGCTTTTGAGTTAACTAATTGGTTAGC
AGAACAAGCACTAATTTATGAGTTAAAATTTGAACAGCTAAAACTTGCAGCAGTAGCGAGACTACGGAATTTAAAACTTGAACCACCGACAGATTCCAGA
TTAGAACGTATCATTCGCTCTGCTATCAGAAATTTTGAATCTAAATTTTTTCGGGACATAACTTCCCAACTATCTAACCAATCTAAAAAGTGGATAAATG
ATTTTTTGAAAGAGAAAGCTTCCGATCAGGAATTAGATGATACCACACAAACAAATCATGATAAACAACTGAATAATCCAGGAGATATCCAATTATCTCA
ACAGTTAGATGACACGAATAACTCAGAAATAAACACTGAAGTGACTAGATTAACATGGGCTGAATTAAAAACAGACCCAGGGAGAATTGGTGTAGAAAGT
TTTCAAAAGGAAGTTGCTAAATTAGAGATTTTTGAGCAATTAGAATTACCAACAGACTTATTTAAAAACATCTCTACCAAAGTTCTCCAAGTCTATAAAA
GTCGGGTAATTGTTGAACATCCTCGTGACTTACGCCGTCACCCAGAACATATTCGCTACACACTATTTACAGCTTTTTGTTGGCTCAGAAGTCAAGAAGT
TATAGATAATTTAGTAGAGTTACTCATTCAGATTGTCCATCGCATAGGTGTGAATGCAGAAAAACGTGTAGATAAAGAGCTTATTCAGGATTTTAAACGG
GTTCATGGGAAGAATAATCTACTATACCAAATGGCAGAAGCTTCCTTGAAAACACCTGATGGCACAGTCAAGGATGTGATTTTTCCTGTAGTAAGTGAAG
TGACTCTCAAGAATTTAGTGAAAGAGTATAAATCTACAGGGAATGCTTACCGTGAGAAAGTTTATACGGTGATGCGCTCTTCTTATGGTGGATATTATCG
GCGAATTTTACCGTTAATTTTAAACAAGCTCGAATTTCGTTCAAATAATGAAGTTCATCGTCCAGTTATTCAAGCGATATCTTTACTAAAAAAGTATGCT
GATAGTAAACAGCGTTATTATGATGCTGGAGAAGATATACCCATTGAGGGGGTATTACGTAGTGGTTGGCAAGAAATTATATTAGAGACGGGAGCAGACG
ATGAAATCAAAGTTAATCGCATTAATTATGAGTTGAGCGTGCTGCAAGCATTGAGAGAAAAGCTGAGATGCAAGGAAATATGGGTTGTAGGAGCTAATCG
TTACAGAAACCCTGAAGAAGATTTACCTGCTGATTTTGAGGCGCAAAGATTAGAATATTTCCAAGCTTTGAAACAACCATCCGATGTAGAAGTCTTTATT
GCTAATTTACAGCAATCTTTGGAGCAATCATTAACTTTACTGGATAAAGGAATACCTAAAAATAGTTTAGTCACACTTAAAACGACAGGCAAAAGTCGAA
TTTGTGTTTCTCCTCTGAATCCTCAAAATGAACCGACTAATTTGACTAGGTTGAAAACTGAAATTACTAGGCGTTGGCGCATGACTAGCCTCTTAGATAT
TCTGAAAGAGACTGATTTGCGAGTTAAGTTTAGCCAACACTTTCAGAGTGTATCAACACGAGAGGTTTTAGGCGAATATACTTTACAAAAACGCTTGCTA
CTTTGTTTATATGGTTTAGGAACGAATACTGGATTAAAGCGTTTAAGTGATGAGATTAAAGGCGACAATTATCAAGATTTACTCCATGTTAAGCGTCATT
TTATTCAGAAAGAACAATTACGTAATGCTATTGCCTGTATTGCAAATGCAATTTTTACTGCCAGAATTTCTACTATTTGGGGAGAGGGTACAACCGCCTG
TGCTTCTGACTCGAAAAAGTTTGGTGCTTGGGATCAAAACTTAATGACTGAGTGGCACATCCGTTATGGTGGAAGAGGTGTGATGATTTATTGGCACGTT
GAGAAGAATTCTGTTTGTATTTATTCACAGTTAAAAACTTGTTCTTCTTCTGAAGTGGCAGCCATGATTGAAGGATTATTACGCCACTGTACTGAGATGA
AAGTGGAGACAAATTATGTGGATAGTCACGGTCAAAATGAAGTGGCTTTTGCTTTCTGTCATTTACTGGGTTTTCAGTTAATGCCGCGTCTTAAACGTAT
CAATGTTCAGAAATTATACCGTCCTTCAACTGGAAATAATGATGCTTATCCAAACTTGCAACCTATTTTAACTCGCGCTATTAATTGGGATTTAATTCGC
CAACAATACGACCAAATGGTGAAGTATGCTACTGCTTTGCGTTTGGGTATGGCAGAAACTGAAGCCATCTTAAAGCGTTTTACTAGGGGTAATTTATTAC
ACCCTACTTATCAAGCCTTGGCGGAATTGGGCAAGGCTGTAAAAACTATATTTTTATGTAAATACCTGCATTCGGTTGAACTGCGACAAGAGATAAATGC
TGGACTCAACGTGGTGGAGAACTGGAATAGTGCTAACAGTTTTATTTTTTACGGCAAGGGTGGGGAGATTGCTACTAATCGTTTGTCTGACCAAGAATTA
GCTGTGTTATCTCTGCATTTACTCCAGATATCTTTGGTATATATAAATACGTTGATGATTCAGGAGGTTTTGTCCCAACCACAATGGATGAAGTTGATGA
AGTTGGAGGATTTGCGGGCGCTTTCGCCTTTAATTTGGGGTCACGTTAATCCCTATGGTACTTTTCGTTTGGATCTTAATGTCAGGTTGCCAATTGAGAC
GGGGTAAATGTGTCTAAAAATACGCTTTGTTCGTATGTCTCTTAATCTTATAGTCTGAAAGTCATCCACCGCAGTACTTTCAGCCTATCTTGCCCCTGGT
GACAGCTTCGCTATATTTACCCC
TTGACAGGCGTTTTATAAGCACAGCCACAAATTGGACAAAATCGGTGTCTCAAAGACAACACCAACTCACCGCAATTCGCACAGTTAGCTCGAATCGGTG
TACCGCAGAGATAACAAAACTTGGCTTTGATATGACTCCACATAGGGTCAACCGCCGCGCCAGGATTCCAACATTGGGGACAAAACTTAACCCCTCTAAC
CTGAGATACTTCCTCACCCTTGATCACAGCATCAAAATATTCTTGAGGTACGCCAAGTGCGATCGCTAACCCTTGAAGTGTCCTACGATTAATTTTAAGC
GTAAGTCCTCGCTCGATTTTCCCGACAGAGCGTCCATGTATACCAGCAGCATCCGCCAACTCAGACTGAGTTAAATTGAGTTTCTTCCTGACCCGTGACA
CGTAACTAGCAAGGGATTCATCGCTATTGGGAGTTTTAAAAGTATCCATAAAAAGCTCAGGGCTAACTCATAAAAAGATATATAATTTATCAATAAAAAA
CCAAGCGAGAGAATACAGAAACAACCGTGAAATCGGCTGTAACTTTAGCCACTGTCACGACCGAATTTCTAGAGCGTCCTGGTCTAGCACCAAGTACTAG
AGAAACCTATGAACTGACCCTCGGACTTTTACTGCAAAAGTATGGAAGTTGGTCAATAGAAATTATCAGTAAGCAAACATTAGTTGAGTATCTAAATAAT
CTCAGTCATTTAAAATACACAACACACCACAAGCATCAAGCAATATTACAAAGTTTGCTTAACTTTGCAGTAGAACAAGGGTATATAAAATCCAACCCTA
TCCGGGGACTAAAACAACGTCTACCTGAAAGAGAGAAAGGCGAACATAAAAGCGACGAGACAATAAGATATCTAACACAATCACAACTAAATATACTATA
TTCTGCCGTAAAAGATGACTTACGTCTAAGTACGATAGTTCATTTACTGCATCGCACAGGATGCAGAATAGGAGAGCTTTTAGCCCTAAACATAGATTCT
GTAGATATCAAGAACCAGAAATTTCAAGTATTAGGTAAAGGCAACAAACAACGCTGGTGTTTTTACAGTGATGACGCAGCCTCAATGCTTGCTAAATACT
TGAAATACTCACGGCATCAAAATACGAATGCCTTGTTTACAGCACAACATCCAGTTACCCGAAAAGTAAGTAGAATCAGCTACCATACATTGCATGATTA
TTGGCGGGAGACAACCAATAAGTATCCACACCTTCAAGGAGTTCGCATTCACGATTTACGACATACATTTGCTACAGAACGAGTGGGGTTAATCAGTATT
GAGGAATTATGCTCATTAATGGGACATGAAAGCATTCAAACAACTTTACGTTACGCTAAAGTCACCTCACAGAAATCAGAATCAGCTGCACGTCATGCCT
TGAATATACTGATTAATTCCGACCAAAAAGCTGACCTTTAGGGCAATTATATAGAATCACTCAGTTCCAGTATGTTTTTCATCGAGAAACAGCATTTTAT
CTCAGTTAAAGATTGTTACCCCAAAGAAGATAGAATACTGTTTGGTTGAAGAGTGAGACTTAATGAAAAAAACCTGGCAGCCAGAAGAATTAGTAGAGTA
TTGGACGCTACTCCCTCTTGAATTAGCACTACTGAATCAGAAAAACGACGAAAATCGGTTAGGTTTTGCTATATTGCTCAAGTTTTTTGAGATTTATGCC
AGATTTCCTGAGAATAATCAAGAAATCTCCCAAAATGTTGTTGATTATGTTGCCAAACTTTTAGATATTTCCCCCCAAAAGTACTCTTACTACGATTGGC
AAGGACGCTCCATAAAATATCATCGCGCTCAAATTAGAGAATTCTTTGGATTTCAAGAAACCAAAGTTAGTGATGCTTTTGAGTTAACTAATTGGTTAGC
AGAACAAGCACTAATTTATGAGTTAAAATTTGAACAGCTAAAACTTGCAGCAGTAGCGAGACTACGGAATTTAAAACTTGAACCACCGACAGATTCCAGA
TTAGAACGTATCATTCGCTCTGCTATCAGAAATTTTGAATCTAAATTTTTTCGGGACATAACTTCCCAACTATCTAACCAATCTAAAAAGTGGATAAATG
ATTTTTTGAAAGAGAAAGCTTCCGATCAGGAATTAGATGATACCACACAAACAAATCATGATAAACAACTGAATAATCCAGGAGATATCCAATTATCTCA
ACAGTTAGATGACACGAATAACTCAGAAATAAACACTGAAGTGACTAGATTAACATGGGCTGAATTAAAAACAGACCCAGGGAGAATTGGTGTAGAAAGT
TTTCAAAAGGAAGTTGCTAAATTAGAGATTTTTGAGCAATTAGAATTACCAACAGACTTATTTAAAAACATCTCTACCAAAGTTCTCCAAGTCTATAAAA
GTCGGGTAATTGTTGAACATCCTCGTGACTTACGCCGTCACCCAGAACATATTCGCTACACACTATTTACAGCTTTTTGTTGGCTCAGAAGTCAAGAAGT
TATAGATAATTTAGTAGAGTTACTCATTCAGATTGTCCATCGCATAGGTGTGAATGCAGAAAAACGTGTAGATAAAGAGCTTATTCAGGATTTTAAACGG
GTTCATGGGAAGAATAATCTACTATACCAAATGGCAGAAGCTTCCTTGAAAACACCTGATGGCACAGTCAAGGATGTGATTTTTCCTGTAGTAAGTGAAG
TGACTCTCAAGAATTTAGTGAAAGAGTATAAATCTACAGGGAATGCTTACCGTGAGAAAGTTTATACGGTGATGCGCTCTTCTTATGGTGGATATTATCG
GCGAATTTTACCGTTAATTTTAAACAAGCTCGAATTTCGTTCAAATAATGAAGTTCATCGTCCAGTTATTCAAGCGATATCTTTACTAAAAAAGTATGCT
GATAGTAAACAGCGTTATTATGATGCTGGAGAAGATATACCCATTGAGGGGGTATTACGTAGTGGTTGGCAAGAAATTATATTAGAGACGGGAGCAGACG
ATGAAATCAAAGTTAATCGCATTAATTATGAGTTGAGCGTGCTGCAAGCATTGAGAGAAAAGCTGAGATGCAAGGAAATATGGGTTGTAGGAGCTAATCG
TTACAGAAACCCTGAAGAAGATTTACCTGCTGATTTTGAGGCGCAAAGATTAGAATATTTCCAAGCTTTGAAACAACCATCCGATGTAGAAGTCTTTATT
GCTAATTTACAGCAATCTTTGGAGCAATCATTAACTTTACTGGATAAAGGAATACCTAAAAATAGTTTAGTCACACTTAAAACGACAGGCAAAAGTCGAA
TTTGTGTTTCTCCTCTGAATCCTCAAAATGAACCGACTAATTTGACTAGGTTGAAAACTGAAATTACTAGGCGTTGGCGCATGACTAGCCTCTTAGATAT
TCTGAAAGAGACTGATTTGCGAGTTAAGTTTAGCCAACACTTTCAGAGTGTATCAACACGAGAGGTTTTAGGCGAATATACTTTACAAAAACGCTTGCTA
CTTTGTTTATATGGTTTAGGAACGAATACTGGATTAAAGCGTTTAAGTGATGAGATTAAAGGCGACAATTATCAAGATTTACTCCATGTTAAGCGTCATT
TTATTCAGAAAGAACAATTACGTAATGCTATTGCCTGTATTGCAAATGCAATTTTTACTGCCAGAATTTCTACTATTTGGGGAGAGGGTACAACCGCCTG
TGCTTCTGACTCGAAAAAGTTTGGTGCTTGGGATCAAAACTTAATGACTGAGTGGCACATCCGTTATGGTGGAAGAGGTGTGATGATTTATTGGCACGTT
GAGAAGAATTCTGTTTGTATTTATTCACAGTTAAAAACTTGTTCTTCTTCTGAAGTGGCAGCCATGATTGAAGGATTATTACGCCACTGTACTGAGATGA
AAGTGGAGACAAATTATGTGGATAGTCACGGTCAAAATGAAGTGGCTTTTGCTTTCTGTCATTTACTGGGTTTTCAGTTAATGCCGCGTCTTAAACGTAT
CAATGTTCAGAAATTATACCGTCCTTCAACTGGAAATAATGATGCTTATCCAAACTTGCAACCTATTTTAACTCGCGCTATTAATTGGGATTTAATTCGC
CAACAATACGACCAAATGGTGAAGTATGCTACTGCTTTGCGTTTGGGTATGGCAGAAACTGAAGCCATCTTAAAGCGTTTTACTAGGGGTAATTTATTAC
ACCCTACTTATCAAGCCTTGGCGGAATTGGGCAAGGCTGTAAAAACTATATTTTTATGTAAATACCTGCATTCGGTTGAACTGCGACAAGAGATAAATGC
TGGACTCAACGTGGTGGAGAACTGGAATAGTGCTAACAGTTTTATTTTTTACGGCAAGGGTGGGGAGATTGCTACTAATCGTTTGTCTGACCAAGAATTA
GCTGTGTTATCTCTGCATTTACTCCAGATATCTTTGGTATATATAAATACGTTGATGATTCAGGAGGTTTTGTCCCAACCACAATGGATGAAGTTGATGA
AGTTGGAGGATTTGCGGGCGCTTTCGCCTTTAATTTGGGGTCACGTTAATCCCTATGGTACTTTTCGTTTGGATCTTAATGTCAGGTTGCCAATTGAGAC
GGGGTAAATGTGTCTAAAAATACGCTTTGTTCGTATGTCTCTTAATCTTATAGTCTGAAAGTCATCCACCGCAGTACTTTCAGCCTATCTTGCCCCTGGT
GACAGCTTCGCTATATTTACCCC
Protein section
ORF number : 3
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
468 bp | 155 aa | 549 | 82 | - | No |
Annotation : XRE family transcriptional regulatorDescription : Transcriptional Regulator factor
ORF sequence :
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
915 bp | 304 aa | 627 | 1541 | + | No |
AG : Tn3 resolvase
ORF sequence :
MKSAVTLATVTTEFLERPGLAPSTRETYELTLGLLLQKYGSWSIEIISKQTLVEYLNNLSHLKYTTHHKHQAILQSLLNFAVEQGYIKSNPIRGLKQRLP
EREKGEHKSDETIRYLTQSQLNILYSAVKDDLRLSTIVHLLHRTGCRIGELLALNIDSVDIKNQKFQVLGKGNKQRWCFYSDDAASMLAKYLKYSRHQNT
NALFTAQHPVTRKVSRISYHTLHDYWRETTNKYPHLQGVRIHDLRHTFATERVGLISIEELCSLMGHESIQTTLRYAKVTSQKSESAARHALNILINSDQ
KADL
EREKGEHKSDETIRYLTQSQLNILYSAVKDDLRLSTIVHLLHRTGCRIGELLALNIDSVDIKNQKFQVLGKGNKQRWCFYSDDAASMLAKYLKYSRHQNT
NALFTAQHPVTRKVSRISYHTLHDYWRETTNKYPHLQGVRIHDLRHTFATERVGLISIEELCSLMGHESIQTTLRYAKVTSQKSESAARHALNILINSDQ
KADL
Blast result :ORF 3
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
3045 bp | 1014 aa | 1663 | 4707 | + | No |
Chemistry : DDE
ORF sequence :
MKKTWQPEELVEYWTLLPLELALLNQKNDENRLGFAILLKFFEIYARFPENNQEISQNVVDYVAKLLDISPQKYSYYDWQGRSIKYHRAQIREFFGFQET
KVSDAFELTNWLAEQALIYELKFEQLKLAAVARLRNLKLEPPTDSRLERIIRSAIRNFESKFFRDITSQLSNQSKKWINDFLKEKASDQELDDTTQTNHD
KQLNNPGDIQLSQQLDDTNNSEINTEVTRLTWAELKTDPGRIGVESFQKEVAKLEIFEQLELPTDLFKNISTKVLQVYKSRVIVEHPRDLRRHPEHIRYT
LFTAFCWLRSQEVIDNLVELLIQIVHRIGVNAEKRVDKELIQDFKRVHGKNNLLYQMAEASLKTPDGTVKDVIFPVVSEVTLKNLVKEYKSTGNAYREKV
YTVMRSSYGGYYRRILPLILNKLEFRSNNEVHRPVIQAISLLKKYADSKQRYYDAGEDIPIEGVLRSGWQEIILETGADDEIKVNRINYELSVLQALREK
LRCKEIWVVGANRYRNPEEDLPADFEAQRLEYFQALKQPSDVEVFIANLQQSLEQSLTLLDKGIPKNSLVTLKTTGKSRICVSPLNPQNEPTNLTRLKTE
ITRRWRMTSLLDILKETDLRVKFSQHFQSVSTREVLGEYTLQKRLLLCLYGLGTNTGLKRLSDEIKGDNYQDLLHVKRHFIQKEQLRNAIACIANAIFTA
RISTIWGEGTTACASDSKKFGAWDQNLMTEWHIRYGGRGVMIYWHVEKNSVCIYSQLKTCSSSEVAAMIEGLLRHCTEMKVETNYVDSHGQNEVAFAFCH
LLGFQLMPRLKRINVQKLYRPSTGNNDAYPNLQPILTRAINWDLIRQQYDQMVKYATALRLGMAETEAILKRFTRGNLLHPTYQALAELGKAVKTIFLCK
YLHSVELRQEINAGLNVVENWNSANSFIFYGKGGEIATNRLSDQELAVLSLHLLQISLVYINTLMIQEVLSQPQWMKLMKLEDLRALSPLIWGHVNPYGT
FRLDLNVRLPIETG
KVSDAFELTNWLAEQALIYELKFEQLKLAAVARLRNLKLEPPTDSRLERIIRSAIRNFESKFFRDITSQLSNQSKKWINDFLKEKASDQELDDTTQTNHD
KQLNNPGDIQLSQQLDDTNNSEINTEVTRLTWAELKTDPGRIGVESFQKEVAKLEIFEQLELPTDLFKNISTKVLQVYKSRVIVEHPRDLRRHPEHIRYT
LFTAFCWLRSQEVIDNLVELLIQIVHRIGVNAEKRVDKELIQDFKRVHGKNNLLYQMAEASLKTPDGTVKDVIFPVVSEVTLKNLVKEYKSTGNAYREKV
YTVMRSSYGGYYRRILPLILNKLEFRSNNEVHRPVIQAISLLKKYADSKQRYYDAGEDIPIEGVLRSGWQEIILETGADDEIKVNRINYELSVLQALREK
LRCKEIWVVGANRYRNPEEDLPADFEAQRLEYFQALKQPSDVEVFIANLQQSLEQSLTLLDKGIPKNSLVTLKTTGKSRICVSPLNPQNEPTNLTRLKTE
ITRRWRMTSLLDILKETDLRVKFSQHFQSVSTREVLGEYTLQKRLLLCLYGLGTNTGLKRLSDEIKGDNYQDLLHVKRHFIQKEQLRNAIACIANAIFTA
RISTIWGEGTTACASDSKKFGAWDQNLMTEWHIRYGGRGVMIYWHVEKNSVCIYSQLKTCSSSEVAAMIEGLLRHCTEMKVETNYVDSHGQNEVAFAFCH
LLGFQLMPRLKRINVQKLYRPSTGNNDAYPNLQPILTRAINWDLIRQQYDQMVKYATALRLGMAETEAILKRFTRGNLLHPTYQALAELGKAVKTIFLCK
YLHSVELRQEINAGLNVVENWNSANSFIFYGKGGEIATNRLSDQELAVLSLHLLQISLVYINTLMIQEVLSQPQWMKLMKLEDLRALSPLIWGHVNPYGT
FRLDLNVRLPIETG
Blast result :
Comments
ISNpu13 (ORF3 : transposase) is 66% aa similar to ISYps3.
This IS had 3 ORFS, ORF1 : XRE family transcriptional regulator, ORF2 : recombinase and ORF3 : transposase.
This IS had 3 ORFS, ORF1 : XRE family transcriptional regulator, ORF2 : recombinase and ORF3 : transposase.
References
1] ISfinder annotation (2010)
2] Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Meeks,J.C., Elhai,J., Campbell,E.L., Thiel,T., Longmire,J., Potts,M. and Atlas,R. (2008) Diret submission GenBank.
2] Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Meeks,J.C., Elhai,J., Campbell,E.L., Thiel,T., Longmire,J., Potts,M. and Atlas,R. (2008) Diret submission GenBank.