ISfinder Mirror Site

ISMae36

Family ISL3
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NC_010296	ND	Microcystis aeruginosa	Microcystis aeruginosa NIES-843

DNA section

IS Length : 1422 bp

Ends

IR Length : 19/26

IRL : GGCTCTTCGGGAATTGTTATGCAAATAATTAACTTAAAATAAAATTCGAT
IRR : GGCTCTTCGTTACCCTTTATGCTAAATCAACATACAAGATGCCAAGATAA

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GGAAAAGAATAC	CCAAAAAG	TTCTATATACAA	8
TAAATCGTCTCT	TAAATTCT	TTAATAACATAA	8
TAAGCCAATAAA	AATAAAAA	GGTGCGTTAATT	8
TGTCTTAATCTC	ATAAAACT	CAGTCTTTCGCT	8
TAGACGATGATG	ACCTTTTT	CTAGGCGATAGT	8
CTTCAAAACCTT	CGGCATTC	AGGCTTCTCGTA	8

DNA sequence

GGCTCTTCGGGAATTGTTATGCAAATAATTAACTTAAAATAAAATTCGATGAGAGCGCCTACGCTCAAAAGTAGCTGAAATCCATACAGGGAAGGACTTA
AGGCACAAACAGGTTAATACCAAAAGATAGACAATTGAGTTAAGATTTGATATAATAGCCAAAAACGAGATTATTTTACTTATGATACTTGACAAATTTT
TGAACCTAAAAGGAACCTGTATTCAAGGCTATCTACACCTAGAAAATATCGGTATAGTTTGCCGAATCGAATCGAAAAATCAAAAAGCAACCTGTCCTCG
TTGTGGGTTAGAGAGCGATAAACTCCACCAAAATCATCGACATTTAGTCAAAGATTTACCAATCTCAGGTCAACCAGTATACCTACAAGTTAATCGTCGT
CAATTTAAGTGCGATAATTGTCAGAGACCCTTTAGCGAAGAGTTAGATTTTGTCGCCAAGAAACGAACCTATACGAAAAGACTAGCCGCAAATATACTCG
AACAATTAAAAGAAGGAGATATTTTAAATGTTAGTCGAATAAATGACGTAACGGAAGAAGAGATTCAAAGAATGATAGAGGACATCGCCGAAGAAATTAC
AGAGCCAGACCTATCGGAATTAAAAAGACTAGGAATTGATGAAATCGCTCTAGTCAAAGGACAAAAAAATTACTGTGCGGTTTTAGTAAATTTAGATACG
GGAAAACTAATAGCTATTCTAGAGAAGCGAACACAAGAAGAGTTGAGAGAAACGCTTACGGGCTGGGGAAAAGAGGTGTTAGAGCAAATTGAAGAAGTGA
GCATAGACCTTTGGTTGCCTTATAAAAATTTGGTGAAAGAATTGATGCCATCGGCCGAAGTAGTCGCCGATAGATTCCATGTAATGAAACAAATTAATCA
AGAGTTAGACGAACAGAGAAGAGCAGAAAAAAGAGCCGTAGAAGCGCAGAAAAATAAAAAACAGAAAGCAGAAAAAGAAGCCAAGCTAGAAGTTTTAAAG
CGAAGTAAATATAGCCTGTTAAAAAATGAAGAAGATTTAACGGAACCCCAAAAAATTAAACTAGAAGCTATCAAAGAAAAATTCCCAAATTTGAAAAAGA
TGCAGGAATTAAAGGAAGAATTTAGAAAGATTTATGAAACCTCAGAGAATCCGACAGAGGGAATGCTATCCATCTCGGAATGGTTGGCAAAATCCTCCAG
TGTTTTTACCAAGAGTTGTCAAACAATCCGAAACTGGTTTGGAGAAATAATTAGTTATTTCGAGCGAAGGACAACGAATGGGGTGGTCGAAGGAATCAAC
AATAAACTTAAACTAATAAAACGGAGAGGCTATGGCTTTAGAAACTTTCGGAATTTTTGGGTTAGAAGTATGTTATCTTGGCATCTTGTATGTTGATTTA
GCATAAAGGGTAACGAAGAGCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1215 bp	404 aa	182	1396	+	No

ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MILDKFLNLKGTCIQGYLHLENIGIVCRIESKNQKATCPRCGLESDKLHQNHRHLVKDLPISGQPVYLQVNRRQFKCDNCQRPFSEELDFVAKKRTYTKR
LAANILEQLKEGDILNVSRINDVTEEEIQRMIEDIAEEITEPDLSELKRLGIDEIALVKGQKNYCAVLVNLDTGKLIAILEKRTQEELRETLTGWGKEVL
EQIEEVSIDLWLPYKNLVKELMPSAEVVADRFHVMKQINQELDEQRRAEKRAVEAQKNKKQKAEKEAKLEVLKRSKYSLLKNEEDLTEPQKIKLEAIKEK
FPNLKKMQELKEEFRKIYETSENPTEGMLSISEWLAKSSSVFTKSCQTIRNWFGEIISYFERRTTNGVVEGINNKLKLIKRRGYGFRNFRNFWVRSMLSW
HLVC

Blast result :

Comments

ISMae36 is 73% aa similar to ISAsp1.

References

1] Modified and submitted by ISfinder (2010)

2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.