ISStau8
- Family IS1182
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAMD01000059 | ND | Stigmatella aurantiaca | Stigmatella aurantiaca DW4/3-1 |
DNA section
IS Length : 1749 bp
Ends
IR Length : 12/15
IRL : GACACGGATCGGTTTCCAGTCCCAGTAAATTCGAGCATTTAGCGAGGGGA
IRR : AACACCGACCGGTTTATGAGCCCGTCATCGGTTCCCCATGCTGCTGAGCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATCGGCTCGC | CTAG | CAGCCCTTCC | 4 |
DNA sequence
GACACGGATCGGTTTCCAGTCCCAGTAAATTCGAGCATTTAGCGAGGGGATCGACAAGAGCCCCCAGATTTGATCAGGTGGCCACCCTACTTGGCAAGTA
ACATCCGAGAGAGGTGACCATGGGGATCATGCGGTGGAGGCCGCCGGAGCCATTGAGCGAGCAAGAAGAGCAGTTCGTGAAGAGGATGGGGAGGAAGGGA
AAGCTGTTTGCGTTCCTGCGCCAACATCGCCACGAGCTGTTGGATGAAGCCTTTCAGGAAGAACTGGAAGGGATGTACCGAGACACGGGAGCGGGAAAGA
CGCCAGTGCCGCCGGGACTGATGGCGATGGCGACACTGTTGCAAGGCTACCTGGGAGCCTCGGACGCAACGATGGTGGAACTGACAGTGTTCGACCTGCG
AGTGCAGATGGTGCTGGATTGCCTGGGACAAACAGAGCCGGCCTTCAGCCAGGGAGCCTTCTACGACTTTCGGCATCGTCTGATTCGAGAGCAGATGGAC
CAGAGGCTGTTGGAAAAGACGGTGGAGGTGGCGCGCCAGCGGATGAGGTGGGAGGCGCGCCAGACCAAGAGCCTGCTGAAAGTGGCCATCGACTCGAAGC
CGTTGGAGGGAGCGGGGCGAGTGGAGGACACGCTCAACCTGTTGGGTCATGCGGCGCGCAAGGTGGTGATGTGTGTGGCCAAGCACTTGGAAATTCCAAT
GAGTTTAGTGTGCCAAGAGGCAGGCATCCCCGTGTTGCTGGAATCGAGCGTGAAGAAGGGGCTGGATGTGGACTGGAACGAGCGTGAGCAAAAAGCCCGA
GCGCTCCAGAAGTTGTACAAGCAGGTAGAGTCCTTGAAGAAGTGGCTGAAAAAGAACCTACCTGAGCACGTGACGCAGGCCCCGTTATCCGAGCACCTGA
AGACGCTGGAGCAGGTGAGCCGCCAGAATCTGGAGCCCGACCCCAACGGAGGAGGAGTGCGAATCCGCTGGGGAGTGGCCGAAGACAGGCGAGTGTCCAT
TGAAGATGGGCAAATGCGCCACGGCCGCAAGAGTCAGAGCAAGCGTTTCAACGGCTACAAGCAGCACATCGCCACGGAGTTGGAGGGGGACCTCATCCTT
GCGTGTGAAGTGACGCCCGCGAATCGTCCCGAGCAGGAGGCAGCGCAAGCGCTCCAGAAGGACATCGAGCGGCAGGGCTTACAGATTGCAGAATTGTATA
TAGATAGAGGGTATATCAACAGCCCAGTAGTGGAGGAGGTACAGAAGAAGGGCGGCGAGGTGGTCTGCAAGGCTTGGGGCAGCCAGAACGGAGAGTTGTT
CGCCAAGTCCGCTTTCCATCTGAACATGAGCCGACGGACGGTGACGTGTCCTGCTGGGCAGAGCCAGTCCTTTACGCTGGGCCATGTGGTGGAATTTGAG
GCACAGAAGTGCGCGAGCTGTCCGCTTCGAGAGAAGTGCACGAGCGCTGCCTCCGGCAGAGGCAGGACGGTGTCCATCGCTGAGAACGAGCCTCTTCAAC
ACCGATTGCGCAAGCTGACGAAGAGCCCTGCTGGGCGAGCGCGCTTGCGCCAGCGCGTCAGCGTCGAACACCGGTTGGCTCATCTGTCGCGAAGGCAGGG
GCATCGCGCTCGGTATCGAGGTATTCGCAAGAACGTCTTTGATTTGCGTCGCGCTGCCGCCCTTCAGAACATCGAGTCATGGCAACGCCACTCAGCACCT
GCTCAGCAGCATGGGGAACCGATGACGGGCTCATAAACCGGTCGGTGTT
ACATCCGAGAGAGGTGACCATGGGGATCATGCGGTGGAGGCCGCCGGAGCCATTGAGCGAGCAAGAAGAGCAGTTCGTGAAGAGGATGGGGAGGAAGGGA
AAGCTGTTTGCGTTCCTGCGCCAACATCGCCACGAGCTGTTGGATGAAGCCTTTCAGGAAGAACTGGAAGGGATGTACCGAGACACGGGAGCGGGAAAGA
CGCCAGTGCCGCCGGGACTGATGGCGATGGCGACACTGTTGCAAGGCTACCTGGGAGCCTCGGACGCAACGATGGTGGAACTGACAGTGTTCGACCTGCG
AGTGCAGATGGTGCTGGATTGCCTGGGACAAACAGAGCCGGCCTTCAGCCAGGGAGCCTTCTACGACTTTCGGCATCGTCTGATTCGAGAGCAGATGGAC
CAGAGGCTGTTGGAAAAGACGGTGGAGGTGGCGCGCCAGCGGATGAGGTGGGAGGCGCGCCAGACCAAGAGCCTGCTGAAAGTGGCCATCGACTCGAAGC
CGTTGGAGGGAGCGGGGCGAGTGGAGGACACGCTCAACCTGTTGGGTCATGCGGCGCGCAAGGTGGTGATGTGTGTGGCCAAGCACTTGGAAATTCCAAT
GAGTTTAGTGTGCCAAGAGGCAGGCATCCCCGTGTTGCTGGAATCGAGCGTGAAGAAGGGGCTGGATGTGGACTGGAACGAGCGTGAGCAAAAAGCCCGA
GCGCTCCAGAAGTTGTACAAGCAGGTAGAGTCCTTGAAGAAGTGGCTGAAAAAGAACCTACCTGAGCACGTGACGCAGGCCCCGTTATCCGAGCACCTGA
AGACGCTGGAGCAGGTGAGCCGCCAGAATCTGGAGCCCGACCCCAACGGAGGAGGAGTGCGAATCCGCTGGGGAGTGGCCGAAGACAGGCGAGTGTCCAT
TGAAGATGGGCAAATGCGCCACGGCCGCAAGAGTCAGAGCAAGCGTTTCAACGGCTACAAGCAGCACATCGCCACGGAGTTGGAGGGGGACCTCATCCTT
GCGTGTGAAGTGACGCCCGCGAATCGTCCCGAGCAGGAGGCAGCGCAAGCGCTCCAGAAGGACATCGAGCGGCAGGGCTTACAGATTGCAGAATTGTATA
TAGATAGAGGGTATATCAACAGCCCAGTAGTGGAGGAGGTACAGAAGAAGGGCGGCGAGGTGGTCTGCAAGGCTTGGGGCAGCCAGAACGGAGAGTTGTT
CGCCAAGTCCGCTTTCCATCTGAACATGAGCCGACGGACGGTGACGTGTCCTGCTGGGCAGAGCCAGTCCTTTACGCTGGGCCATGTGGTGGAATTTGAG
GCACAGAAGTGCGCGAGCTGTCCGCTTCGAGAGAAGTGCACGAGCGCTGCCTCCGGCAGAGGCAGGACGGTGTCCATCGCTGAGAACGAGCCTCTTCAAC
ACCGATTGCGCAAGCTGACGAAGAGCCCTGCTGGGCGAGCGCGCTTGCGCCAGCGCGTCAGCGTCGAACACCGGTTGGCTCATCTGTCGCGAAGGCAGGG
GCATCGCGCTCGGTATCGAGGTATTCGCAAGAACGTCTTTGATTTGCGTCGCGCTGCCGCCCTTCAGAACATCGAGTCATGGCAACGCCACTCAGCACCT
GCTCAGCAGCATGGGGAACCGATGACGGGCTCATAAACCGGTCGGTGTT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1608 bp | 538 aa | 129 | 1736 | + | No |
Chemistry : DDE
ORF sequence :
MGIMRWRPPEPLSEQEEQFVKRMGRKGKLFAFLRQHRHELLDEAFQEELEGMYRDTGAGKTPVPPGLMAMATLLQGYLGASDATMVELTVFDLRVQMVLD
CLGQTEPAFSQGAFYDFRHRLIREQMDQRLLEKTVEVARQRMRWEARQTKSLLKVAIDSKPLEGAGRVEDTLNLLGHAARKVVMCVAKHLEIPMSLVCQE
AGIPVLLESSVKKGLDVDWNEREQKARALQKLYKQVESLKKWLKKNLPEHVTQAPLSEHLKTLEQVSRQNLEPDPNGGGVRIRWGVAEDRRVSIEDGQMR
HGRKSQSKRFNGYKQHIATELEGDLILACEVTPANRPEQEAAQALQKDIERQGLQIAELYIDRGYINSPVVEEVQKKGGEVVCKAWGSQNGELFAKSAFH
LNMSRRTVTCPAGQSQSFTLGHVVEFEAQKCASCPLREKCTSAASGRGRTVSIAENEPLQHRLRKLTKSPAGRARLRQRVSVEHRLAHLSRRQGHRARYR
GIRKNVFDLRRAAALQNIESWQRHSAPAQQHGEPMTGS
CLGQTEPAFSQGAFYDFRHRLIREQMDQRLLEKTVEVARQRMRWEARQTKSLLKVAIDSKPLEGAGRVEDTLNLLGHAARKVVMCVAKHLEIPMSLVCQE
AGIPVLLESSVKKGLDVDWNEREQKARALQKLYKQVESLKKWLKKNLPEHVTQAPLSEHLKTLEQVSRQNLEPDPNGGGVRIRWGVAEDRRVSIEDGQMR
HGRKSQSKRFNGYKQHIATELEGDLILACEVTPANRPEQEAAQALQKDIERQGLQIAELYIDRGYINSPVVEEVQKKGGEVVCKAWGSQNGELFAKSAFH
LNMSRRTVTCPAGQSQSFTLGHVVEFEAQKCASCPLREKCTSAASGRGRTVSIAENEPLQHRLRKLTKSPAGRARLRQRVSVEHRLAHLSRRQGHRARYR
GIRKNVFDLRRAAALQNIESWQRHSAPAQQHGEPMTGS
Blast result :
Comments
ISStau8 is 70% aa similar to ISStau7.
References
1] ISfinder annotation (2010)
2] Nierman,W.C. (2006) Direct submission GenBank.
2] Nierman,W.C. (2006) Direct submission GenBank.