ISfinder Mirror Site

ISMae21

Family IS630
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NC_010296	ND	Microcystis aeruginosa	Microcystis aeruginosa NIES-843

DNA section

IS Length : 950 bp

Ends

IR Length : 21/25

IRL : TAGTCATTTCAAATAAGTGTGAGACGAGGGAAAAATAAGGTAAAATCAAG
IRR : TAGTTATTTCAAATAAGAACGAGACACTAGGCGACACAATAAGTACGAAT

Insertion site

Left flank	Direct repeat	Right flank	DR Length
AGTAATCAAT	TA	AGACTTTGGT	2
CCAACCAAGT	TA	AATAGTGAAC	2
CTGTTCCTAT	TA	ATTTGGCTAG	2

DNA sequence

TAGTCATTTCAAATAAGTGTGAGACGAGGGAAAAATAAGGTAAAATCAAGAGAAACGAGCAACCCATACAGAAAAATGTCTTATAGCCTAGACTTGAGAA
AAAAAGTAATCGATTATGTAGAGAATGGGGGAAGCATAACCAAAGCCGCCGCTCTATTTAATATAGGAAGAGCGACGATATATAGATGGCTAGGTAGGGA
AAAACTGGAAGCAACAAAGGTAAAACACCGTCAGAGAAAGCTGGACTGGAAAGCACTGTCAAAAGATGTCCAAGAAAATCCCGAGGCAAGATTAAGAGAC
AGAGCCGAGAAATTTGGAGTGAGACCAAGTGCCATTTGCTATGCCTTAAAAAACATGAAAGTTACCAGAAAAAAGAAGGAACTTCGTTATAGAGAAAGAA
ACCGAGAAGAAAGAATGAAATACTACAGAGTGCTGAGAGAATTGATTAAAATATATGGAAGTGAAAGCCTTGTATTTATTGATGAGTCAGGGTTTGAAGA
ATTTCAAGCCTGTTTTTATGCTTGGTCAAAAAAAGGGAAGAAAGTCTTTGGAGATAGACAAGGAAAACGAGGAAAAAGAGAGAACCTTGTCGCTGGTAGA
AGAAAGGGAAAAAAAGACTTTATTGCACCGATGGTATTTACGAGAAGCCTGAATGCCGAAGGTTTTGAAGGGTGGTTATCTTTATATTTGTTGCCCTCTC
TAACCATAACATCAGTATTAATTATGGATAATGCACCAATTCATCGGAAGACAGTCATTAAACAACTGGTAGAGGAAGCAGGTCATCAGGTCGTGTTTTT
GCCAAAATACTCTCCTGATTTAAATGATATCGAACATGATTTTAGTGCATTAAAGAGGGCAAGAATGTATGCTCCTGTGGGGACACCCCTTGATGAAATT
ATTCGTACTTATTGTGTCGCCTAGTGTCTCGTTCTTATTTGAAATAACTA

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
849 bp	282 aa	76	924	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSYSLDLRKKVIDYVENGGSITKAAALFNIGRATIYRWLGREKLEATKVKHRQRKLDWKALSKDVQENPEARLRDRAEKFGVRPSAICYALKNMKVTRKK
KELRYRERNREERMKYYRVLRELIKIYGSESLVFIDESGFEEFQACFYAWSKKGKKVFGDRQGKRGKRENLVAGRRKGKKDFIAPMVFTRSLNAEGFEGW
LSLYLLPSLTITSVLIMDNAPIHRKTVIKQLVEEAGHQVVFLPKYSPDLNDIEHDFSALKRARMYAPVGTPLDEIIRTYCVA

Blast result :

Comments

ISMae21 is 88% aa similar to ISTcSa.

References

1] Modified and submitted by ISfinder (2010)

2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256.