ISStau7

  • Family IS1182
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AAMD01000329 ND Stigmatella aurantiaca
Stigmatella aurantiaca DW4/3-1
DNA section
IS Length : 1716 bp

Ends


IR Length : 13/15

IRL : AGCACCGATCAGGCTGAAACCTACGTCAATTCGAGCGCTTGGAGAGGGGG
IRR : AGCACCGAACAGGTTAGAGCCCCTCCGTTCGCCGCTGAGCGGCGTGCGAG

Insertion site


Left flankDirect repeatRight flankDR Length
CTGCACGGGCCTAGTGTCGGGAGT4

DNA sequence

AGCACCGATCAGGCTGAAACCTACGTCAATTCGAGCGCTTGGAGAGGGGGATCGACACCCGAGCGCGTCCATGCTCATGAGTGCTGCCGGTGCGAGGAGG
AGCGGCATGGAGCGATGGAAGCCGGAGGTGAAGTGCAGCGAGCGGGAGGAGAGGCTGCTGAAGCTGGCGGGCAGGAGCCGAAAGCTGTTCGTGTTCCTGA
GAGAGCATCGCCACGAGCTGTTCGCGGAGGCCTTCCAAGCGGAGTTGGAGGCAATGTATCGCGACTCGGGACAAGGAGACGAGCCGCAGCCGCCCGCGCT
GATGTGCATGGGAGTGCTGCTCCAGGCCTACCTCCAAGTCTCGGATGCGGAGGCGGTACGGCTGTCGGCGACGGACCGTTGCTGGAGACTGGTGCTGGGG
ACGCTTGCGCAAGACGATGACAAACCCGCCTTCTCGCAGGGAGGGCTGCAGCAGTTTCGCCAACGGCTCATCCGCCACGACATGGACCGTCGGCTGCTGG
AGCGGACGGTAGAGCTGGCCAAAGAGACGAGAGCCTTCGACTGGAAGAAGCTGCCCAAGCAGCTGAGAGTGGCGGTGGACAGCCGCCCTTTAGAAGGAGC
CGGGCGGGTTGAGGACACCTTCAACCTGCTCGGCCACGCGGGGCGGAAAATAGCCGAGTGCATGGCCGTGGCGCTGGAAACAACCGTCGAGGAGGTCTGT
GCTCAGGCGGGCGCGCCGCTGCTGGCGGCCTCGAGCATCAAGGCCGCCTTGGACGTCGACTGGAACGATTCGGAACAGAAGGCCGAGGCACTCAATCGCC
TCTGCAAGCAGTTGGATCGGCTGTCAGCATGGGTGGAGAAGAGGCGTCCCAAGGAGAGCGAGGAGGCACCGCTGGGGCGCTACATCGAAGCGCTCGTTCA
GGTGAAAGCACAGGACTTGGAGCCTGTGCCAGGCGGGGTACGGATTCGGCAAGGTGTCGCCGAGGACCGGCGCGTCTCCATTGAAGATGCTCAGATGCGC
CACGGCCGCAAGAGCAAGAGCAAGCGGTTCAATGGTTTCAAGCAGCACCTGAGCACGCATCTGGATTCGGAGCGGGTGCTGGCCTGTGCGGTGACGCCCG
CCAATCGGCCTGAGGAGGAGGCGGCTCCCCAGCTTCAAGCGGACATGGCGCGGATAGGATTCGAGCCGGATGAACTGCTGATAGACCGGGCCTATCTGAA
CAGCACCCTGGTGGAGCACGTGGTGGGGAGGGCAGGTGCCATCGTCTGCAAACCGTGGAAAGGTGCTCACGGCAAGCCTGGGCTCTTTGGGAAAAGAGAC
TTCAAGATCAACGTCCGTGACGGAACCATCACCTGTCCCGGAGGACAGGTGGAGGCCTTTGAACCGGGGCAGGTAGTCCAGTTCGACCCTGAAGTCTGCG
GCCCGTGCCCCCTGCGCGCGCAGTGTACGCATGCAGCGACCGGCCGGGGACGGACCGTCACGATGGGGGAGGATGAAGCCCTCCAGAAGAAGCTGCGAAG
TCTTCAAGAAACCCGCACCGGACGCGCCAAACTGCGCGAGCGCGTCGGTGTCGAACATCGGCTGGCCCACCTGAGCAATCGGCAGGGGCCTCGTGCTCGC
TATCTGGGCACGCGCAAGAATACATTCGACCTGCGTCGCCTCTGTGCCGTGCAGAACCTGGAGACCCTCGCACGCCGCTCAGCGGCGAACGGAGGGGCTC
TAACCTGTTCGGTGCT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1614 bp537 aa1071720+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MERWKPEVKCSEREERLLKLAGRSRKLFVFLREHRHELFAEAFQAELEAMYRDSGQGDEPQPPALMCMGVLLQAYLQVSDAEAVRLSATDRCWRLVLGTL
AQDDDKPAFSQGGLQQFRQRLIRHDMDRRLLERTVELAKETRAFDWKKLPKQLRVAVDSRPLEGAGRVEDTFNLLGHAGRKIAECMAVALETTVEEVCAQ
AGAPLLAASSIKAALDVDWNDSEQKAEALNRLCKQLDRLSAWVEKRRPKESEEAPLGRYIEALVQVKAQDLEPVPGGVRIRQGVAEDRRVSIEDAQMRHG
RKSKSKRFNGFKQHLSTHLDSERVLACAVTPANRPEEEAAPQLQADMARIGFEPDELLIDRAYLNSTLVEHVVGRAGAIVCKPWKGAHGKPGLFGKRDFK
INVRDGTITCPGGQVEAFEPGQVVQFDPEVCGPCPLRAQCTHAATGRGRTVTMGEDEALQKKLRSLQETRTGRAKLRERVGVEHRLAHLSNRQGPRARYL
GTRKNTFDLRRLCAVQNLETLARRSAANGGALTCSVL

 

Blast result :
Comments
ISStau7 is 60% aa similar to ISGvi6. The STOP codon is in the DR.
References
1] ISfinder annotation (2010)
2] Nierman,W.C. (2006) Direct submission GenBank.