ISStau7
- Family IS1182
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAMD01000329 | ND | Stigmatella aurantiaca | Stigmatella aurantiaca DW4/3-1 |
DNA section
IS Length : 1716 bp
Ends
IR Length : 13/15
IRL : AGCACCGATCAGGCTGAAACCTACGTCAATTCGAGCGCTTGGAGAGGGGG
IRR : AGCACCGAACAGGTTAGAGCCCCTCCGTTCGCCGCTGAGCGGCGTGCGAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTGCACGGGC | CTAG | TGTCGGGAGT | 4 |
DNA sequence
AGCACCGATCAGGCTGAAACCTACGTCAATTCGAGCGCTTGGAGAGGGGGATCGACACCCGAGCGCGTCCATGCTCATGAGTGCTGCCGGTGCGAGGAGG
AGCGGCATGGAGCGATGGAAGCCGGAGGTGAAGTGCAGCGAGCGGGAGGAGAGGCTGCTGAAGCTGGCGGGCAGGAGCCGAAAGCTGTTCGTGTTCCTGA
GAGAGCATCGCCACGAGCTGTTCGCGGAGGCCTTCCAAGCGGAGTTGGAGGCAATGTATCGCGACTCGGGACAAGGAGACGAGCCGCAGCCGCCCGCGCT
GATGTGCATGGGAGTGCTGCTCCAGGCCTACCTCCAAGTCTCGGATGCGGAGGCGGTACGGCTGTCGGCGACGGACCGTTGCTGGAGACTGGTGCTGGGG
ACGCTTGCGCAAGACGATGACAAACCCGCCTTCTCGCAGGGAGGGCTGCAGCAGTTTCGCCAACGGCTCATCCGCCACGACATGGACCGTCGGCTGCTGG
AGCGGACGGTAGAGCTGGCCAAAGAGACGAGAGCCTTCGACTGGAAGAAGCTGCCCAAGCAGCTGAGAGTGGCGGTGGACAGCCGCCCTTTAGAAGGAGC
CGGGCGGGTTGAGGACACCTTCAACCTGCTCGGCCACGCGGGGCGGAAAATAGCCGAGTGCATGGCCGTGGCGCTGGAAACAACCGTCGAGGAGGTCTGT
GCTCAGGCGGGCGCGCCGCTGCTGGCGGCCTCGAGCATCAAGGCCGCCTTGGACGTCGACTGGAACGATTCGGAACAGAAGGCCGAGGCACTCAATCGCC
TCTGCAAGCAGTTGGATCGGCTGTCAGCATGGGTGGAGAAGAGGCGTCCCAAGGAGAGCGAGGAGGCACCGCTGGGGCGCTACATCGAAGCGCTCGTTCA
GGTGAAAGCACAGGACTTGGAGCCTGTGCCAGGCGGGGTACGGATTCGGCAAGGTGTCGCCGAGGACCGGCGCGTCTCCATTGAAGATGCTCAGATGCGC
CACGGCCGCAAGAGCAAGAGCAAGCGGTTCAATGGTTTCAAGCAGCACCTGAGCACGCATCTGGATTCGGAGCGGGTGCTGGCCTGTGCGGTGACGCCCG
CCAATCGGCCTGAGGAGGAGGCGGCTCCCCAGCTTCAAGCGGACATGGCGCGGATAGGATTCGAGCCGGATGAACTGCTGATAGACCGGGCCTATCTGAA
CAGCACCCTGGTGGAGCACGTGGTGGGGAGGGCAGGTGCCATCGTCTGCAAACCGTGGAAAGGTGCTCACGGCAAGCCTGGGCTCTTTGGGAAAAGAGAC
TTCAAGATCAACGTCCGTGACGGAACCATCACCTGTCCCGGAGGACAGGTGGAGGCCTTTGAACCGGGGCAGGTAGTCCAGTTCGACCCTGAAGTCTGCG
GCCCGTGCCCCCTGCGCGCGCAGTGTACGCATGCAGCGACCGGCCGGGGACGGACCGTCACGATGGGGGAGGATGAAGCCCTCCAGAAGAAGCTGCGAAG
TCTTCAAGAAACCCGCACCGGACGCGCCAAACTGCGCGAGCGCGTCGGTGTCGAACATCGGCTGGCCCACCTGAGCAATCGGCAGGGGCCTCGTGCTCGC
TATCTGGGCACGCGCAAGAATACATTCGACCTGCGTCGCCTCTGTGCCGTGCAGAACCTGGAGACCCTCGCACGCCGCTCAGCGGCGAACGGAGGGGCTC
TAACCTGTTCGGTGCT
AGCGGCATGGAGCGATGGAAGCCGGAGGTGAAGTGCAGCGAGCGGGAGGAGAGGCTGCTGAAGCTGGCGGGCAGGAGCCGAAAGCTGTTCGTGTTCCTGA
GAGAGCATCGCCACGAGCTGTTCGCGGAGGCCTTCCAAGCGGAGTTGGAGGCAATGTATCGCGACTCGGGACAAGGAGACGAGCCGCAGCCGCCCGCGCT
GATGTGCATGGGAGTGCTGCTCCAGGCCTACCTCCAAGTCTCGGATGCGGAGGCGGTACGGCTGTCGGCGACGGACCGTTGCTGGAGACTGGTGCTGGGG
ACGCTTGCGCAAGACGATGACAAACCCGCCTTCTCGCAGGGAGGGCTGCAGCAGTTTCGCCAACGGCTCATCCGCCACGACATGGACCGTCGGCTGCTGG
AGCGGACGGTAGAGCTGGCCAAAGAGACGAGAGCCTTCGACTGGAAGAAGCTGCCCAAGCAGCTGAGAGTGGCGGTGGACAGCCGCCCTTTAGAAGGAGC
CGGGCGGGTTGAGGACACCTTCAACCTGCTCGGCCACGCGGGGCGGAAAATAGCCGAGTGCATGGCCGTGGCGCTGGAAACAACCGTCGAGGAGGTCTGT
GCTCAGGCGGGCGCGCCGCTGCTGGCGGCCTCGAGCATCAAGGCCGCCTTGGACGTCGACTGGAACGATTCGGAACAGAAGGCCGAGGCACTCAATCGCC
TCTGCAAGCAGTTGGATCGGCTGTCAGCATGGGTGGAGAAGAGGCGTCCCAAGGAGAGCGAGGAGGCACCGCTGGGGCGCTACATCGAAGCGCTCGTTCA
GGTGAAAGCACAGGACTTGGAGCCTGTGCCAGGCGGGGTACGGATTCGGCAAGGTGTCGCCGAGGACCGGCGCGTCTCCATTGAAGATGCTCAGATGCGC
CACGGCCGCAAGAGCAAGAGCAAGCGGTTCAATGGTTTCAAGCAGCACCTGAGCACGCATCTGGATTCGGAGCGGGTGCTGGCCTGTGCGGTGACGCCCG
CCAATCGGCCTGAGGAGGAGGCGGCTCCCCAGCTTCAAGCGGACATGGCGCGGATAGGATTCGAGCCGGATGAACTGCTGATAGACCGGGCCTATCTGAA
CAGCACCCTGGTGGAGCACGTGGTGGGGAGGGCAGGTGCCATCGTCTGCAAACCGTGGAAAGGTGCTCACGGCAAGCCTGGGCTCTTTGGGAAAAGAGAC
TTCAAGATCAACGTCCGTGACGGAACCATCACCTGTCCCGGAGGACAGGTGGAGGCCTTTGAACCGGGGCAGGTAGTCCAGTTCGACCCTGAAGTCTGCG
GCCCGTGCCCCCTGCGCGCGCAGTGTACGCATGCAGCGACCGGCCGGGGACGGACCGTCACGATGGGGGAGGATGAAGCCCTCCAGAAGAAGCTGCGAAG
TCTTCAAGAAACCCGCACCGGACGCGCCAAACTGCGCGAGCGCGTCGGTGTCGAACATCGGCTGGCCCACCTGAGCAATCGGCAGGGGCCTCGTGCTCGC
TATCTGGGCACGCGCAAGAATACATTCGACCTGCGTCGCCTCTGTGCCGTGCAGAACCTGGAGACCCTCGCACGCCGCTCAGCGGCGAACGGAGGGGCTC
TAACCTGTTCGGTGCT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1614 bp | 537 aa | 107 | 1720 | + | No |
Chemistry : DDE
ORF sequence :
MERWKPEVKCSEREERLLKLAGRSRKLFVFLREHRHELFAEAFQAELEAMYRDSGQGDEPQPPALMCMGVLLQAYLQVSDAEAVRLSATDRCWRLVLGTL
AQDDDKPAFSQGGLQQFRQRLIRHDMDRRLLERTVELAKETRAFDWKKLPKQLRVAVDSRPLEGAGRVEDTFNLLGHAGRKIAECMAVALETTVEEVCAQ
AGAPLLAASSIKAALDVDWNDSEQKAEALNRLCKQLDRLSAWVEKRRPKESEEAPLGRYIEALVQVKAQDLEPVPGGVRIRQGVAEDRRVSIEDAQMRHG
RKSKSKRFNGFKQHLSTHLDSERVLACAVTPANRPEEEAAPQLQADMARIGFEPDELLIDRAYLNSTLVEHVVGRAGAIVCKPWKGAHGKPGLFGKRDFK
INVRDGTITCPGGQVEAFEPGQVVQFDPEVCGPCPLRAQCTHAATGRGRTVTMGEDEALQKKLRSLQETRTGRAKLRERVGVEHRLAHLSNRQGPRARYL
GTRKNTFDLRRLCAVQNLETLARRSAANGGALTCSVL
AQDDDKPAFSQGGLQQFRQRLIRHDMDRRLLERTVELAKETRAFDWKKLPKQLRVAVDSRPLEGAGRVEDTFNLLGHAGRKIAECMAVALETTVEEVCAQ
AGAPLLAASSIKAALDVDWNDSEQKAEALNRLCKQLDRLSAWVEKRRPKESEEAPLGRYIEALVQVKAQDLEPVPGGVRIRQGVAEDRRVSIEDAQMRHG
RKSKSKRFNGFKQHLSTHLDSERVLACAVTPANRPEEEAAPQLQADMARIGFEPDELLIDRAYLNSTLVEHVVGRAGAIVCKPWKGAHGKPGLFGKRDFK
INVRDGTITCPGGQVEAFEPGQVVQFDPEVCGPCPLRAQCTHAATGRGRTVTMGEDEALQKKLRSLQETRTGRAKLRERVGVEHRLAHLSNRQGPRARYL
GTRKNTFDLRRLCAVQNLETLARRSAANGGALTCSVL
Blast result :
Comments
ISStau7 is 60% aa similar to ISGvi6. The STOP codon is in the DR.
References
1] ISfinder annotation (2010)
2] Nierman,W.C. (2006) Direct submission GenBank.
2] Nierman,W.C. (2006) Direct submission GenBank.