ISBmu8
- Family IS630
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010801 | ND | Burkholderia multivorans | Burkholderia multivorans ATCC 17616 chromosome 3 Burkholderia multivorans ATCC 17616 chromosome 2 |
DNA section
IS Length : 1165 bp
Ends
IR Length : 23/32
IRL : GTGTAGTGCGTCACAAATAATGCAACTTAATCGCGGTTTACGAGTCTCCT
IRR : GTGGTCTGCGTCAAACAGATTGCATCTTATTCAGTTTGGCCCTGGCACGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATTCGCAAAC | TA | GCTAAACGCA | 2 |
CCTCGACCAC | TA | GTTTGCCGCC | 2 |
GCCGATTCGC | TA | GCGACGCCGC | 2 |
DNA sequence
GTGTAGTGCGTCACAAATAATGCAACTTAATCGCGGTTTACGAGTCTCCTTGATACGGAGGGAGAACTCATGCGAATCGCGGCGAAAGTTGAGCTAAGTG
AAGCACAGCGCAAACAGTTAAAGACGTGGGCTACTGGCCGGACGATTCCGGTTCGACTGGCTGAGCGCGCCAAGATGATTTTGCTCGCAGCGCAGGGAAA
GACAGATAAAGAGATCAGTGCGGACCTGGCTATCTGGCGAGGCACGGTCGCACGCTGGCGCGCTCGCTTTATAGCTGACGGTGTGACGGGGATCGAGCGG
GATGAGACGCGACCCGGGCGCAAGCCGAAGATCTCCGCGCGCAAGGTCAAGACCGTTGTGGCACTGACGACGCAGCAACGTCCGGATAACGCGACGCATT
GGAGCACACGCAGCATGGCAGCGGTGGCCGGCATAAGTGAGGCGAGCGTGCGGCGCATCTGGCAGGCGCATGGCCTCAAGCCGCATCGGTTAGAGAGCTT
CAAGGTATCGAACGACAAGCACTTTGCCGAGAAACTCGAGGACATCGTCGGGCTGTATCTCGATCCCCCGGAGCACGCCTTGGTCCTGTGCTGCGATGAG
AAGTCCCAGATCCAGGCACTTGATCGGACCCAGCCGGGCTTGCCGCTCAAGCGAGGTCGCGCTCAAACGATGACGCACGATTACAAGCGCCATGGTGTGA
CGACGCTGTTTGCCGCGATGAACACGCTCGATGGCAGTGTCATTGGCCAGTGCCAGACTAAACATCGTCACCAGGAGTGGTTGAGCTTCTTGCGCAAGAT
CGATCGCAACACGCCCAAGGACAAGGAGCTGCATTTGATCGCTGACAACTATGCAACCCATAAGCACCCCGAGGTACAGGCATGGCTTGCCAAGCACCCG
CGATTCCACATGCATTTCACGCCCACCAGTGCCTCTTGGCTCAACATGGTCGAACGCTTCTTTCGTGACTTATCAGTGAACCAGTTGCGACGTGCGGCGT
TCCGCTCGGTACCCGAATTGGTCAGCACAATCGAACAGTACGTGCAGAAGCACAATCGTCATCCGAAACCATTCATCTGGACAGCAAAAGCCTCCGACAT
CCTCGCGAAAGTCACGCGTGCCAGGGCCAAACTGAATAAGATGCAATCTGTTTGACGCAGACCAC
AAGCACAGCGCAAACAGTTAAAGACGTGGGCTACTGGCCGGACGATTCCGGTTCGACTGGCTGAGCGCGCCAAGATGATTTTGCTCGCAGCGCAGGGAAA
GACAGATAAAGAGATCAGTGCGGACCTGGCTATCTGGCGAGGCACGGTCGCACGCTGGCGCGCTCGCTTTATAGCTGACGGTGTGACGGGGATCGAGCGG
GATGAGACGCGACCCGGGCGCAAGCCGAAGATCTCCGCGCGCAAGGTCAAGACCGTTGTGGCACTGACGACGCAGCAACGTCCGGATAACGCGACGCATT
GGAGCACACGCAGCATGGCAGCGGTGGCCGGCATAAGTGAGGCGAGCGTGCGGCGCATCTGGCAGGCGCATGGCCTCAAGCCGCATCGGTTAGAGAGCTT
CAAGGTATCGAACGACAAGCACTTTGCCGAGAAACTCGAGGACATCGTCGGGCTGTATCTCGATCCCCCGGAGCACGCCTTGGTCCTGTGCTGCGATGAG
AAGTCCCAGATCCAGGCACTTGATCGGACCCAGCCGGGCTTGCCGCTCAAGCGAGGTCGCGCTCAAACGATGACGCACGATTACAAGCGCCATGGTGTGA
CGACGCTGTTTGCCGCGATGAACACGCTCGATGGCAGTGTCATTGGCCAGTGCCAGACTAAACATCGTCACCAGGAGTGGTTGAGCTTCTTGCGCAAGAT
CGATCGCAACACGCCCAAGGACAAGGAGCTGCATTTGATCGCTGACAACTATGCAACCCATAAGCACCCCGAGGTACAGGCATGGCTTGCCAAGCACCCG
CGATTCCACATGCATTTCACGCCCACCAGTGCCTCTTGGCTCAACATGGTCGAACGCTTCTTTCGTGACTTATCAGTGAACCAGTTGCGACGTGCGGCGT
TCCGCTCGGTACCCGAATTGGTCAGCACAATCGAACAGTACGTGCAGAAGCACAATCGTCATCCGAAACCATTCATCTGGACAGCAAAAGCCTCCGACAT
CCTCGCGAAAGTCACGCGTGCCAGGGCCAAACTGAATAAGATGCAATCTGTTTGACGCAGACCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1086 bp | 361 aa | 70 | 1155 | + | No |
Chemistry : DDE
ORF sequence :
MRIAAKVELSEAQRKQLKTWATGRTIPVRLAERAKMILLAAQGKTDKEISADLAIWRGTVARWRARFIADGVTGIERDETRPGRKPKISARKVKTVVALT
TQQRPDNATHWSTRSMAAVAGISEASVRRIWQAHGLKPHRLESFKVSNDKHFAEKLEDIVGLYLDPPEHALVLCCDEKSQIQALDRTQPGLPLKRGRAQT
MTHDYKRHGVTTLFAAMNTLDGSVIGQCQTKHRHQEWLSFLRKIDRNTPKDKELHLIADNYATHKHPEVQAWLAKHPRFHMHFTPTSASWLNMVERFFRD
LSVNQLRRAAFRSVPELVSTIEQYVQKHNRHPKPFIWTAKASDILAKVTRARAKLNKMQSV
TQQRPDNATHWSTRSMAAVAGISEASVRRIWQAHGLKPHRLESFKVSNDKHFAEKLEDIVGLYLDPPEHALVLCCDEKSQIQALDRTQPGLPLKRGRAQT
MTHDYKRHGVTTLFAAMNTLDGSVIGQCQTKHRHQEWLSFLRKIDRNTPKDKELHLIADNYATHKHPEVQAWLAKHPRFHMHFTPTSASWLNMVERFFRD
LSVNQLRRAAFRSVPELVSTIEQYVQKHNRHPKPFIWTAKASDILAKVTRARAKLNKMQSV
Blast result :
Comments
ISBmu8 is 76% aa similar to ISCARN69.
References
1] Ohtsubo,Y., Yuji,N. and Tsuda,M. (2007) Direct submission.