ISBmu8

  • Family IS630
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_010801 ND Burkholderia multivorans
Burkholderia multivorans ATCC 17616 chromosome 3
Burkholderia multivorans ATCC 17616 chromosome 2
DNA section
IS Length : 1165 bp

Ends


IR Length : 23/32

IRL : GTGTAGTGCGTCACAAATAATGCAACTTAATCGCGGTTTACGAGTCTCCT
IRR : GTGGTCTGCGTCAAACAGATTGCATCTTATTCAGTTTGGCCCTGGCACGC

Insertion site


Left flankDirect repeatRight flankDR Length
ATTCGCAAACTAGCTAAACGCA2
CCTCGACCACTAGTTTGCCGCC2
GCCGATTCGCTAGCGACGCCGC2

DNA sequence

GTGTAGTGCGTCACAAATAATGCAACTTAATCGCGGTTTACGAGTCTCCTTGATACGGAGGGAGAACTCATGCGAATCGCGGCGAAAGTTGAGCTAAGTG
AAGCACAGCGCAAACAGTTAAAGACGTGGGCTACTGGCCGGACGATTCCGGTTCGACTGGCTGAGCGCGCCAAGATGATTTTGCTCGCAGCGCAGGGAAA
GACAGATAAAGAGATCAGTGCGGACCTGGCTATCTGGCGAGGCACGGTCGCACGCTGGCGCGCTCGCTTTATAGCTGACGGTGTGACGGGGATCGAGCGG
GATGAGACGCGACCCGGGCGCAAGCCGAAGATCTCCGCGCGCAAGGTCAAGACCGTTGTGGCACTGACGACGCAGCAACGTCCGGATAACGCGACGCATT
GGAGCACACGCAGCATGGCAGCGGTGGCCGGCATAAGTGAGGCGAGCGTGCGGCGCATCTGGCAGGCGCATGGCCTCAAGCCGCATCGGTTAGAGAGCTT
CAAGGTATCGAACGACAAGCACTTTGCCGAGAAACTCGAGGACATCGTCGGGCTGTATCTCGATCCCCCGGAGCACGCCTTGGTCCTGTGCTGCGATGAG
AAGTCCCAGATCCAGGCACTTGATCGGACCCAGCCGGGCTTGCCGCTCAAGCGAGGTCGCGCTCAAACGATGACGCACGATTACAAGCGCCATGGTGTGA
CGACGCTGTTTGCCGCGATGAACACGCTCGATGGCAGTGTCATTGGCCAGTGCCAGACTAAACATCGTCACCAGGAGTGGTTGAGCTTCTTGCGCAAGAT
CGATCGCAACACGCCCAAGGACAAGGAGCTGCATTTGATCGCTGACAACTATGCAACCCATAAGCACCCCGAGGTACAGGCATGGCTTGCCAAGCACCCG
CGATTCCACATGCATTTCACGCCCACCAGTGCCTCTTGGCTCAACATGGTCGAACGCTTCTTTCGTGACTTATCAGTGAACCAGTTGCGACGTGCGGCGT
TCCGCTCGGTACCCGAATTGGTCAGCACAATCGAACAGTACGTGCAGAAGCACAATCGTCATCCGAAACCATTCATCTGGACAGCAAAAGCCTCCGACAT
CCTCGCGAAAGTCACGCGTGCCAGGGCCAAACTGAATAAGATGCAATCTGTTTGACGCAGACCAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1086 bp361 aa701155+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRIAAKVELSEAQRKQLKTWATGRTIPVRLAERAKMILLAAQGKTDKEISADLAIWRGTVARWRARFIADGVTGIERDETRPGRKPKISARKVKTVVALT
TQQRPDNATHWSTRSMAAVAGISEASVRRIWQAHGLKPHRLESFKVSNDKHFAEKLEDIVGLYLDPPEHALVLCCDEKSQIQALDRTQPGLPLKRGRAQT
MTHDYKRHGVTTLFAAMNTLDGSVIGQCQTKHRHQEWLSFLRKIDRNTPKDKELHLIADNYATHKHPEVQAWLAKHPRFHMHFTPTSASWLNMVERFFRD
LSVNQLRRAAFRSVPELVSTIEQYVQKHNRHPKPFIWTAKASDILAKVTRARAKLNKMQSV

 

Blast result :
Comments
ISBmu8 is 76% aa similar to ISCARN69.
References
1] Ohtsubo,Y., Yuji,N. and Tsuda,M. (2007) Direct submission.