ISBmu23
- Family IS5
- Group IS5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010805 | ND | Burkholderia multivorans | Burkholderia multivorans ATCC 17616 chromosome 2 |
DNA section
IS Length : 1210 bp
Ends
IR Length : 15/16
IRL : GGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGG
IRR : GGAAACGCTGATCAATGAGCCTGTCGTCCGCATAACGGACGAGGCAGGTT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCCGCGGTTC | CTAA | TGGGACGACG | 4 |
DNA sequence
GGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTGTAGAAAGAAGCTCACGGAACGGACCCACGACGATGCAGCGGCAGA
TCGGTTTTGCGGAAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCT
GTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGG
TTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCA
CGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAA
GGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGC
AACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTAT
CGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGT
GAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAGATC
CGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCA
GTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCC
CGAATACGAGCGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACAGGCTCATTGAT
CAGCGTTTCC
TCGGTTTTGCGGAAGCGGAAAGTGCGGGCAAGAAGCGGGTGACCAAGCGTCAACGCTTTCTGGCCGAGATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCT
GTCGGTGATCGGGCCGTATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGG
TTGTCGGACGAAGGGCTTGAAGATGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCA
CGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGACGCGAAAGCTGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAA
GGAAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACGCCGGGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGC
AACGACTGGTATTTCGGCATGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAGCCGGACGTAT
CGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAGCGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGGT
GAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGAAGGACCTCGTGATCGCGGTCGAGCGAACCAAGGCGCAGATC
CGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGCTGTTCA
GTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTGTCGACTCATGGGAGCAATCCGTCATGTGTGTGAAAAACGCGGGAAGTGAGGCC
CGAATACGAGCGAAACTCACCTCGCATGTCGTCAAATTCCTACGTCAATCTGAAAATTGCAACCTGCCTCGTCCGTTATGCGGACGACAGGCTCATTGAT
CAGCGTTTCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
993 bp | 330 aa | 88 | 1080 | + | No |
Chemistry : DDE
ORF sequence :
MQRQIGFAEAESAGKKRVTKRQRFLAEMEKVVPWSRLLSVIGPYYPKGERGRPPIGLERMLRIYLLQQWYGLSDEGLEDALYDSIAMRAFAGIDLARENV
PDATTLLKFRRLLVEHALTRKLFDEIGIELCERGLMMKEGTLVDATIFEAAPSTKNAGKSRDPEMHQTKKGNDWYFGMKAHVGVDADSGLVHSVVTTAAN
EPDVSQAHALLHGHEQEAFGDAGYTGVDKREEMKGKTVKWHVALKRGKIRAMQEGPLKDLVIAVERTKAQIRARVEHPFHVVKNLFRHRKVRYKGLARNT
AQLFSLFALANLVIAKNQLLSTHGSNPSCV
PDATTLLKFRRLLVEHALTRKLFDEIGIELCERGLMMKEGTLVDATIFEAAPSTKNAGKSRDPEMHQTKKGNDWYFGMKAHVGVDADSGLVHSVVTTAAN
EPDVSQAHALLHGHEQEAFGDAGYTGVDKREEMKGKTVKWHVALKRGKIRAMQEGPLKDLVIAVERTKAQIRARVEHPFHVVKNLFRHRKVRYKGLARNT
AQLFSLFALANLVIAKNQLLSTHGSNPSCV
Blast result :
Comments
ISBmu23 is 91% aa similar to ISBmu2.
References
1] Ohtsubo,Y., Yuji,N. and Tsuda,M. (2007) Direct submission GenBank.