ISBmu20

  • Family IS5
  • Group IS5
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_010801 ND Burkholderia multivorans
Burkholderia multivorans ATCC 17616 chromosome 3
DNA section
IS Length : 1158 bp

Ends


IR Length : 16

IRL : GGAAGGTCTGCATAAACCGCCCGGACATGTGCTTGGCGCCGGCCTGATTG
IRR : GGAAGGTCTGCACAAATGAGCGCTGACCATGGTTGGGTGCACTGACATGA

Insertion site


Left flankDirect repeatRight flankDR Length
ATCAGTACTCCTAAGGGTTGATGT4

DNA sequence

GGAAGGTCTGCATAAACCGCCCGGACATGTGCTTGGCGCCGGCCTGATTGCCTGAGACCATTGATCCCATGAAGCAGAGCAGCCTTGGATTGGGAACGTC
GACGAAGCGCACGCGCCGTCGGGAGTTCCTCGACGAGATGGACCGGGTGGTGCCGTGGTCCGACCTGGTGGCGCAGATCGCGCCGTTCATGCCCGAGGGC
AAACGCGGCCGTCCGCCGTTCCCAGTGGAGTCGCTGCTGCGCATCCACTTCATGCAGCAGTGGTTCACGCTGAGCGACCCGGCCATGGAAGACGCGCTGC
ATGACATGCCGCTGTTCCGTGACTTCGCCGGCCTGGGCGGCTGGGATGACCGGCTGCCCGACGAGAGCACCATCTTGCGCTTCCCTCATGTGCTGGAGAA
GCACAAGCTGGCCGAGCGGATCCTGGCGACCGTCAACCTGCTGCTGGGTGCCAAGGGTCTGATGCTGCGCAGCGGCACGGTGGTCGATGCCACGCTGATC
TCGGCGCCGAGCTCGACCAAGAACGCCAGCGGTGAGCGCGACCCGGAGATGCACCAGAGCAAGAAGGGCCAGCAGTGGTTCTTCGGCATGAAGGCGCACA
TCGGCGTGGACGCCGACTCGGGTCTGGTTCACACCGTGCGTGGCACATCGGGCAACGTCAACGATGTGGTCGAAGCCAACAGCTTGCTGCACGGGCAAGA
GACGGATGCCTTTGCCGATGCCGGCTATCAAGGCGCGCACAAGCGGCCCGACGCCAAAGAGGATGTGCAGTGGCATGTGGCCATGCGCCCGGGCTTGCGC
AAGCTGCTGGACAAGGCAGACCCGGCGGACGCGCTGACCGAGCAGGTCGAGCGCATCAAGGCCAGCATCCGCGCCAAGGTGGAGCACCCGTTCCGTGTCA
TCAAGCGCCAGTTCGGCCATGTGAAGGTGCGCTACCGCGGCTTGGCCAAGAACACGGCGCAGTTGCACACGCTGTTCGCGCTGGCCAATCTGTGGATGGT
GCGCAAGCGTTTGACGGGGAGCCTGGCATGAGTGCGCCTGCTGCACGGGAAATAAGCGCGAAACGCGCCCAAAACACCTGCCAGCAGAGCGTTCAACCGC
CAATCTGGTCATGTCAGTGCACCCAACCATGGTCAGCGCTCATTTGTGCAGACCTTCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
963 bp320 aa691031+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKQSSLGLGTSTKRTRRREFLDEMDRVVPWSDLVAQIAPFMPEGKRGRPPFPVESLLRIHFMQQWFTLSDPAMEDALHDMPLFRDFAGLGGWDDRLPDES
TILRFPHVLEKHKLAERILATVNLLLGAKGLMLRSGTVVDATLISAPSSTKNASGERDPEMHQSKKGQQWFFGMKAHIGVDADSGLVHTVRGTSGNVNDV
VEANSLLHGQETDAFADAGYQGAHKRPDAKEDVQWHVAMRPGLRKLLDKADPADALTEQVERIKASIRAKVEHPFRVIKRQFGHVKVRYRGLAKNTAQLH
TLFALANLWMVRKRLTGSLA

 

Blast result :
Comments
ISBmu20 is 87% aa similar to ISAau3.
References
1]Ohtsubo,Y., Yuji,N. and Tsuda,M.(2007) Direct submission GenBank.