ISUnCu10
- Family IS5
- Group IS5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
EF089389 | ND | Uncultured marine | Uncultured Chroococcales cyanobacterium HF070 14 C03 Uncultured marine bacterium HOT0 02H05 |
DNA section
IS Length : 1691 bp
Ends
IR Length : 15/16
IRL : GGGTTTGCTGAATAAAAGCAAAACCCTATTCTTTAAAAGGTTACACCCAT
IRR : GGGTTTGCTGAAAAAGTTTCTCCAAAATTTATGCCACTTTTGACCAAGAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGATGGAAGC | TAAATA | AGAAATGAGG | 6 |
CAATCTACTA | TAATTA | ACATAAGAAG | 6 |
GAAGTCATTG | TAAGT | GGCTCTTAAT | 5 |
DNA sequence
GGGTTTGCTGAATAAAAGCAAAACCCTATTCTTTAAAAGGTTACACCCATATTCGCGATCGCAAAAAAGATCAGCTTTGTCGGCTACAAACCGCTATAAT
TGGTAGAAACACCTCCCAGTTGTTGGTCAAGAACAAATGTATCGAAAAGAGGAGCAACCTTTACCGCCCCCAGAAAAATTTGAATTACCTTTCGAGGGCA
AATTGTCCCCCAATAATCGTTGGGTAATCATGGCAGAGTTGATACCTTGGGATGATTTTGAGGAAGAATATGCTAAACTTTTTTCAGCAGACAAAGGTGC
GCCAGCCAAACTATTTAGAATGGCATTAGGGACATTAATTATTAAGGAAAAATTAGGAACAAGTGATAGAGAAACTATAGAACAGATTAGAGAAAATCCC
TATCTACAATACTTTATAGGTTTAAATTGTTATCAACAAGAGCCACCACTGGAATCTTCAATGCTAGTTCATTTTAGGAAAAGAATTGATGGAGAATTGA
TAAACAAAATCAATAAAAAAATAGTAAAAAGAGAAATAGACAAGAGTGATAAAGAAGTAAAAAAAAAGGATTGTCTCCAAGAAAAAGGAGAAAAAATAAA
AAATAAAGGTAAACTAATTTTAGATGCGACTTGTGCGCCAGCAGACATCAAATACCCAACGGATTTAGGCATATTAAATCAAGCCAGAATTGAGACAGAA
AGAATAATAGATAATCTTTATAAACCATTAAGAGTAAAATTGAGAAAAAAGCCGAGAACTTCTAGAACAATTGCTAGAAAGGAATACTTAAAAGTAGCTA
AAAAACGAAAAGTATCTTATCAAGAAAGAAGAAAAGCTATCGGGAAACAGTTAAAATACCTTAAGAAAAATTTAGGAAATATAGAAGACTTAATTCAAGC
TGGGGCTTCCCTGGAAAATCTGAGTAAAAGACAGAAAAATTGTCTAGAGACTATCAAAAAATTTTATGAACAACAACAGTCAATGTGGGAGAATAAGACC
CAGAGTGTTCCTCAAAGAATTGTAAGTTTAACTCAACCGCATATTCGTCCAATAGTGAGGGGAAAAGCAGGAAAACCAATAGAGTTTGGAGCTAAACTCT
CAGTAAGCTGTGTAGATAACTATGTGTTTCTAGACAAAATAAGTTGGGAAAACTTCAATGAATCTTGTCATTTAAAAGAACAAGTAGAAAAGTATAAAGA
AACGTTTGGCTATTATCCCGAATCCGTCCATGTAGATAAAATTTATCGAACTAGGGAAAACAGAAATTGGTGTAAGGAAAGAGGGATAAGAATCAGTGGT
CCGAAGTTAGGAAGACCTCCGAAAAATGTCAGTGAAGAAGAAAAGAAACAATCCCACTCCGATGAATGCTTCCGTAATGCTATTGAGGGAAAGTTTGGAC
AAGCTAAACGAAGATTTAGCCTAAATCTCGTGATGACAAAACTCCCTGAAACCTCCATTACATCTATTGCTATTACATTTTTAGTTGTCAATCTTTCTAA
ACTTCTGAGGCAGTTTTTGTCGCTTTTTTTGTCCTTATTTACTAATAATAGAACAGGGGAACTCATCAAACCGCCTTTCATTAATTTTGATTATACTTTA
AACAATTTTTATGTACTAAAACTTATTGATTTGTCAGAAAATTCTTGGTCAAAAGTGGCATAAATTTTGGAGAAACTTTTTCAGCAAACCC
TGGTAGAAACACCTCCCAGTTGTTGGTCAAGAACAAATGTATCGAAAAGAGGAGCAACCTTTACCGCCCCCAGAAAAATTTGAATTACCTTTCGAGGGCA
AATTGTCCCCCAATAATCGTTGGGTAATCATGGCAGAGTTGATACCTTGGGATGATTTTGAGGAAGAATATGCTAAACTTTTTTCAGCAGACAAAGGTGC
GCCAGCCAAACTATTTAGAATGGCATTAGGGACATTAATTATTAAGGAAAAATTAGGAACAAGTGATAGAGAAACTATAGAACAGATTAGAGAAAATCCC
TATCTACAATACTTTATAGGTTTAAATTGTTATCAACAAGAGCCACCACTGGAATCTTCAATGCTAGTTCATTTTAGGAAAAGAATTGATGGAGAATTGA
TAAACAAAATCAATAAAAAAATAGTAAAAAGAGAAATAGACAAGAGTGATAAAGAAGTAAAAAAAAAGGATTGTCTCCAAGAAAAAGGAGAAAAAATAAA
AAATAAAGGTAAACTAATTTTAGATGCGACTTGTGCGCCAGCAGACATCAAATACCCAACGGATTTAGGCATATTAAATCAAGCCAGAATTGAGACAGAA
AGAATAATAGATAATCTTTATAAACCATTAAGAGTAAAATTGAGAAAAAAGCCGAGAACTTCTAGAACAATTGCTAGAAAGGAATACTTAAAAGTAGCTA
AAAAACGAAAAGTATCTTATCAAGAAAGAAGAAAAGCTATCGGGAAACAGTTAAAATACCTTAAGAAAAATTTAGGAAATATAGAAGACTTAATTCAAGC
TGGGGCTTCCCTGGAAAATCTGAGTAAAAGACAGAAAAATTGTCTAGAGACTATCAAAAAATTTTATGAACAACAACAGTCAATGTGGGAGAATAAGACC
CAGAGTGTTCCTCAAAGAATTGTAAGTTTAACTCAACCGCATATTCGTCCAATAGTGAGGGGAAAAGCAGGAAAACCAATAGAGTTTGGAGCTAAACTCT
CAGTAAGCTGTGTAGATAACTATGTGTTTCTAGACAAAATAAGTTGGGAAAACTTCAATGAATCTTGTCATTTAAAAGAACAAGTAGAAAAGTATAAAGA
AACGTTTGGCTATTATCCCGAATCCGTCCATGTAGATAAAATTTATCGAACTAGGGAAAACAGAAATTGGTGTAAGGAAAGAGGGATAAGAATCAGTGGT
CCGAAGTTAGGAAGACCTCCGAAAAATGTCAGTGAAGAAGAAAAGAAACAATCCCACTCCGATGAATGCTTCCGTAATGCTATTGAGGGAAAGTTTGGAC
AAGCTAAACGAAGATTTAGCCTAAATCTCGTGATGACAAAACTCCCTGAAACCTCCATTACATCTATTGCTATTACATTTTTAGTTGTCAATCTTTCTAA
ACTTCTGAGGCAGTTTTTGTCGCTTTTTTTGTCCTTATTTACTAATAATAGAACAGGGGAACTCATCAAACCGCCTTTCATTAATTTTGATTATACTTTA
AACAATTTTTATGTACTAAAACTTATTGATTTGTCAGAAAATTCTTGGTCAAAAGTGGCATAAATTTTGGAGAAACTTTTTCAGCAAACCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1527 bp | 508 aa | 137 | 1663 | + | No |
Chemistry : DDE
ORF sequence :
MYRKEEQPLPPPEKFELPFEGKLSPNNRWVIMAELIPWDDFEEEYAKLFSADKGAPAKLFRMALGTLIIKEKLGTSDRETIEQIRENPYLQYFIGLNCYQ
QEPPLESSMLVHFRKRIDGELINKINKKIVKREIDKSDKEVKKKDCLQEKGEKIKNKGKLILDATCAPADIKYPTDLGILNQARIETERIIDNLYKPLRV
KLRKKPRTSRTIARKEYLKVAKKRKVSYQERRKAIGKQLKYLKKNLGNIEDLIQAGASLENLSKRQKNCLETIKKFYEQQQSMWENKTQSVPQRIVSLTQ
PHIRPIVRGKAGKPIEFGAKLSVSCVDNYVFLDKISWENFNESCHLKEQVEKYKETFGYYPESVHVDKIYRTRENRNWCKERGIRISGPKLGRPPKNVSE
EEKKQSHSDECFRNAIEGKFGQAKRRFSLNLVMTKLPETSITSIAITFLVVNLSKLLRQFLSLFLSLFTNNRTGELIKPPFINFDYTLNNFYVLKLIDLS
ENSWSKVA
QEPPLESSMLVHFRKRIDGELINKINKKIVKREIDKSDKEVKKKDCLQEKGEKIKNKGKLILDATCAPADIKYPTDLGILNQARIETERIIDNLYKPLRV
KLRKKPRTSRTIARKEYLKVAKKRKVSYQERRKAIGKQLKYLKKNLGNIEDLIQAGASLENLSKRQKNCLETIKKFYEQQQSMWENKTQSVPQRIVSLTQ
PHIRPIVRGKAGKPIEFGAKLSVSCVDNYVFLDKISWENFNESCHLKEQVEKYKETFGYYPESVHVDKIYRTRENRNWCKERGIRISGPKLGRPPKNVSE
EEKKQSHSDECFRNAIEGKFGQAKRRFSLNLVMTKLPETSITSIAITFLVVNLSKLLRQFLSLFLSLFTNNRTGELIKPPFINFDYTLNNFYVLKLIDLS
ENSWSKVA
Blast result :
Comments
ISUnCu10 is 86% aa similar to ISCysp15.
References
1] ISfinder annotation (2010)
2] Zehr,J.P., Bench,S.R., Mondragon,E.A., McCarren,J. and DeLong,E.F. (2007) Proc. Natl. Acad. Sci. U.S.A. 104 (45), 17807-17812.
2] Zehr,J.P., Bench,S.R., Mondragon,E.A., McCarren,J. and DeLong,E.F. (2007) Proc. Natl. Acad. Sci. U.S.A. 104 (45), 17807-17812.