ISMpo10
- Family Tn3
- Group
Isoform Synonym(s) TnMpo10
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_010721 | ND | Methylobacterium populi | Methylobacterium populi BJ001 plasmid pMPOP02 |
DNA section
IS Length : 4911 bp
Ends
IR Length : 32/38
IRL : GGGGTCAGGACATAGAACGGGCACAGATATACGCTAAGCGTCTCTGCGCG
IRR : GGGGTCGGTACACAGAACGGACCCAGATATACGCTAAGGTTTTGCCGTGC
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TCCTCGACAT | GACATGGACG | 0 |
DNA sequence
GGGGTCAGGACATAGAACGGGCACAGATATACGCTAAGCGTCTCTGCGCGCACTTATGGGTCGACTCTATGCGTCGACGACTCCAGCATTCCAAAGGCAT
CCATCGGACAGTTGTAGCATCGCCTCTCGTCGCAGAGCCGGCATATCGTCAGCGCCGAGACAGCGTCGTCAGACATCTGCGCAAGTATTGTCTCGGCAAT
ACGTTCCAGCACGAGGCGGTCAGCATTCGAGACATGGCTAAGGATTTCGGATAAAGTCTCGTTTCTTCGTTGCAGGATCGCAGATAGGCGAGTCTCGCCT
GCCTCAGTGAGCATCAGCGCTACTGCACGACGGTCCCGTAGCGCTTTGGATCGAACGGCGAACCCGGCTGCAACCAATCGATCGACAAGCCGCACCGTCC
CCGCGTGGGACAAGCCTAGCACCCGTCCTAATTCGTCGATCGAAAGACCGGTCGCGTGACCGATGACGACGATCGCCGCGGTGGTTTCGCCACCGCCGGG
TATCGTCGGGTCGAATGCCGCCTTCTTAATTCGATCGGTGATGCCCACTGCGAGGGCGCCGAACAGATTGACGAGCCGGTCCGAGAGTACGTTCAAAGGG
TTGCCTCATTCATTGACGGCGCATAGTGTATGCGCAGCGCATATATCACGCCTGTCTAAGCATGAAGGCAGGTCATGCGCCATGATGAAAGCGAGGCACC
ATGTTTTCGACATTACACATAGCTGAAAAGACGACCGGCTCTCGCGGGTCTCTCGCGTTGCTGCGCTGGGCGCTGGTGGTCATCTTTCTCTGGTTCGGTT
GCATGAAATTCACGAGCTATGAAGCGATGGGCATCGCGCCATTGATGAAGAACAGTCCGATCATGAGCTGGATTCCGGCCGTTTTTGGGGTGCAGGGTGG
AAGCTATTTTATAGGCACCGTCGAGCTCGCGACGGCCGCTGCGCTGATTATCGGTGCTTTCAACAAGACGGCCTCCGCTCTCGGCGCGGCGATGTCATGC
CTGACTTATGCCGTGACACTGACGTTTTTCCTGAGCACGCCTGGCGTCGCCGAGCCGACCGCTGGCGGGTTCCCGGCGATTTCGGCCGGAACCGGACAGT
TCCTGTTGAAGGACCTGGTGCTTCTTGCGGCATCAGCGTGCCTTCTACTTGCGTCCATACGGACAGCAGACGCGTGACGGCAAACAGGTGATAGGCGACG
CTCCGGACCTGCGCTTTTGCCGAACCATACCCGCCTCAGCCCATAACGATCGACAAACCCTGTCGCTTTGATAGGGTGTTCGAAAACATGCTTTCGAGGG
TTTGTCGTACATGCTGGTCGGATATATGCGGGTGTCAACGACCGATGACCGCCAAACGGTCGATCTCCAGCGGGACGCGCTCGTCGCAACCGGGGTCGAT
CATCGGCATCTCCATACCGACAAGGCATCCGGCGCGCGCGACGACCGACCAGGCCTGAAAGCCTGCCTCGACTATCTGAACGCGGGCGACACACTGATCG
TGTGGAAGCTCGACCGGCTCGGACGCTCGCTGCCGCACCTGCTGACGATCGTCACCGATCTGAAGGCGCGCGGCATCGCGTTCCGGTCGCTGACCGAGCA
GATGGATACGACCACGCCGCACGGCGAATTGCTGTTCTCGCTGTTCGGTGCATTGGCACAATATGAGCGTGCGCTCACGCGCGAACGGGTGATGGCGGGA
CTGGCTGCTGCCAAACGCCGGGGACGCCAAGGTGGCCGCCCGCCGATGATCGACGCCGAAACGCTCGAGCGGATCACCGCCGCGCTGGATGGCGGGGCCA
GCAAGGCGTCCGTCTGCCGGACCTTCAAGGTGCCGCGTTCGACCCTTCTCGGCACGCTTGCCCGGATCGGCTGGACCGCACCGGCCAAGGTCTAAGCCGA
TGCCGCGTCGCGCCGTCCTGTCGGACGAGCAACGCGCGGCGTTGCTCGCGCTTCCCGACGACGAAACCCTGCTCGTCCAGCACTGGACATTGAGCCGGGA
CGACTTGGCCATCATCGTCCGCCGGAGGCGACCGCATAACCGGCTGGGTTTCGCGATCCAGCTTTGCGCGCTGCGCTATCCTGGCCGTTTCCTGCGACCC
GGTGAACTGATCCCTGATACGCCGCTCGCGTTCGTCGCAGAGCAATTGCAGGTCGGACCCGAGGTGCTGGCCGACTACGCGACGCGCGGCCCGACCCGGT
ACGAACAGCTCGATGCACTGCGCGATGCATTCGGCTTCATGCCGCTCAGTCGGCCGCTGCGAACGACGTTGCAGGAATGGCTCCTGCCGATCGCGCTGAC
GACGACCAGCGGGGCTAGGCTGGCGCGCGTGATGCTGGATGAGTGCCGGCGACGGCGCATCATTGTGCCGGGCATCAGTTCGGTCGAGCGGATGGTCGCA
CAGGCGTTGCTCGATGCCGAACGCCATGTCGCCGAGCATCTGACCCGAGGACTCGATGCTCGACAGCGCCGGCTGCTCGATGCGCTTCTCCTGCCCCACA
CAGGCACGAACTTGAGCGATCTGGCCTGGGTGCGGCAGTCACCCGGCAAGCCCGGCCGAAAGACATTCGCCGCCATCATCGAGCGACTGACACTGCTTCG
GGCCATCGGGATCGATCCGGATATCGCCGTAGGCGTCCATCCCGAGCGCCTCCGACGCCTGTGCCAGGAAGGCGTGCGGCTGACCGCGCAACATGTTCGG
ACGCTGCAAGCGACGCGGCGTCGCGCCACATTGGTGGCGACCATCCTCGAAACCATCGTTACCCTCACCGACGATGCGGTGCTGATGTTCGATCGCCTGC
TTGGGCAGATGTTCCGGCGCGAACAGAACAGCGCGGACACGACACTCAAGCGCAACCGGCGCACCATCAACGGCAAAATCCGGCTGCTTGCCCAACTCGG
CGCTGCCTTGCTCGCCGCCAAGATATCAGGTGGCGATATCGGCGCTGCGGTCGAGGCAGCGATCGGATGGAATGATCTCGGCCGCGAGGTCGATGAAGCC
CGCAAGCTGATCCGCCCCGATTCGGTCGATCCCGTCGCGGTCGCCGCGACCAATTACCCCGTCCTCCGACAGGTCGGTCCCTCGTTCATCGCCTCGTTCA
CATTCGGGGCGGTGCCAGCCTGCCATGCGCTCGCGCGAGCGGTCGCGATCATGCGCGACCTTCATTTTGGTCATCTGCGCAAATTGCCTGCAGGCACGCC
AGTCGGCTTCATCCGGCAAGCTTGGCGTCGGGCGATCGGCACCGGCATTCCCGATCGCAGGATCTATGAATTGTGCGTGCTGGTCGAGCTTCGCGACCGG
CTTCGCGCCGGCGACATGTGGGTCGAGGGAAGCCGACGCTATCGTGCTGTCGAGCAGCAACTCATTCCTGCCCCCGTATTCGCCAACATGCGCGCGGCCG
GCCCCTTGCCGATACCGGCACCGGATACGGCCGATATCTGGCTGGCCGAACGACGCGCCCGCCTCGCCCGTCGATTGGCCGAGGTCGAGCGAAAGGCGGA
GACGGACGCGCTGGAAGACGTGCAGCTCAGCTTGGGCAGGCTGCGGATTTCGCCCTTGAAGGCGATTACTCCCGAGGAATCCGATACCGCCCTTGCGCCG
CTCTATGCGCATCTGCCCGCGATCCGCATCACCGACCTTCTTGCCGAAGTCGATCGATGGACCGGGTTCAGCCAGTGCTTCACGCATCTGCAAAGTGGCC
GTGCCGCGGATGAACCACGTGCGATCCTCACGGCGGTGCTCGCCGATGCCACCAATCTGGGCCATACGCGCATGGCGGAAGCCTGCAATCTCGTGACCCA
GCGCCAACTCGGTTGGCTCGCCTCATGGCATCTGCGCGAGGAAACCTACGGTCGCGCGCTCGCCCGGCTTGTCGACGCCCAACACACCGCGCCGCTGGCC
GCGCTGTTCGGGTCCGGCACCTCGTCCAGCTCAGACGGTCAGAACTTTCCGCTCGACCGCCGCGCCCAGGCAACCGGCGCAGTCAATCCGCACAAGGGGA
CAGAGCCGGCTGTCTCCTTTTACAGCCACGTCTCGGATCGCTACGCGCCGTTCCATTCCACAGTTATCTCCGCTTCGGCGAGCGAGGCGGCACAGGTGCT
CGACGGGCTGCTCCACCACGGCGCCGATCTGCACATCGAAGAGCATCACGTCGATGGCGGGGGCGTCTCCGACCATGTGTTCGCGCTATGTCATCTGCTT
GGGTTCCGGTTCGCGCCGCGTATCCCGAATATCGCCGCACGCCGTTTGCACCTGTTTAACGGCATCGAACCCGGCCCCGATATTGCGCCGCTGGTCGCGG
GCCGCATCGACGAAGGTCTGATCGAGGCACACTGGGACGACGTGCTGCGACTGGGAACCTCGATCCGCACAGGCGTCGTCAGCGCCTCGATCATGCTGGA
ACGGCTCGGCTCCTATCCACGCGCCAACGGCCTGGCACTGGCGTTGCGCGAGATCGGTCGCGTCGAGCGTACCCTGTTCACGCTCGACTGGATCGAGCAG
CCCGAACAGCGTCGCCGCGCCACCCGCGAACTCAACAAGGGAGAAGCGGAAAATGCCCTGAAACGCGCCATCTTCTTCCATCGCATCGGCCGTATCCGCG
ATCATGCGCTGCAAGCCCAAAGCCATCGGGCGAGCGCGCTGAACCTCGTCGCCGGTGCCATCGTCCTGTGGAACACGACCTACCTGCAAGCCGCCCGGAT
GCATCTCGCCAACCTCGGCCGGCCGGTCCCGCCGGACCTGCTGCAACACCTATCACCGCTCGGTTGGCAGCATATCAATCTCACCGGCGATTACCTCTGG
ACCGATCCCGATGCGCCATCCACCGCGCTCAGACCGCTTCGCCAGATGCGCGCCGTCGAAGGCACGGCAAAACCTTAGCGTATATCTGGGTCCGTTCTGT
GTACCGACCCC
CCATCGGACAGTTGTAGCATCGCCTCTCGTCGCAGAGCCGGCATATCGTCAGCGCCGAGACAGCGTCGTCAGACATCTGCGCAAGTATTGTCTCGGCAAT
ACGTTCCAGCACGAGGCGGTCAGCATTCGAGACATGGCTAAGGATTTCGGATAAAGTCTCGTTTCTTCGTTGCAGGATCGCAGATAGGCGAGTCTCGCCT
GCCTCAGTGAGCATCAGCGCTACTGCACGACGGTCCCGTAGCGCTTTGGATCGAACGGCGAACCCGGCTGCAACCAATCGATCGACAAGCCGCACCGTCC
CCGCGTGGGACAAGCCTAGCACCCGTCCTAATTCGTCGATCGAAAGACCGGTCGCGTGACCGATGACGACGATCGCCGCGGTGGTTTCGCCACCGCCGGG
TATCGTCGGGTCGAATGCCGCCTTCTTAATTCGATCGGTGATGCCCACTGCGAGGGCGCCGAACAGATTGACGAGCCGGTCCGAGAGTACGTTCAAAGGG
TTGCCTCATTCATTGACGGCGCATAGTGTATGCGCAGCGCATATATCACGCCTGTCTAAGCATGAAGGCAGGTCATGCGCCATGATGAAAGCGAGGCACC
ATGTTTTCGACATTACACATAGCTGAAAAGACGACCGGCTCTCGCGGGTCTCTCGCGTTGCTGCGCTGGGCGCTGGTGGTCATCTTTCTCTGGTTCGGTT
GCATGAAATTCACGAGCTATGAAGCGATGGGCATCGCGCCATTGATGAAGAACAGTCCGATCATGAGCTGGATTCCGGCCGTTTTTGGGGTGCAGGGTGG
AAGCTATTTTATAGGCACCGTCGAGCTCGCGACGGCCGCTGCGCTGATTATCGGTGCTTTCAACAAGACGGCCTCCGCTCTCGGCGCGGCGATGTCATGC
CTGACTTATGCCGTGACACTGACGTTTTTCCTGAGCACGCCTGGCGTCGCCGAGCCGACCGCTGGCGGGTTCCCGGCGATTTCGGCCGGAACCGGACAGT
TCCTGTTGAAGGACCTGGTGCTTCTTGCGGCATCAGCGTGCCTTCTACTTGCGTCCATACGGACAGCAGACGCGTGACGGCAAACAGGTGATAGGCGACG
CTCCGGACCTGCGCTTTTGCCGAACCATACCCGCCTCAGCCCATAACGATCGACAAACCCTGTCGCTTTGATAGGGTGTTCGAAAACATGCTTTCGAGGG
TTTGTCGTACATGCTGGTCGGATATATGCGGGTGTCAACGACCGATGACCGCCAAACGGTCGATCTCCAGCGGGACGCGCTCGTCGCAACCGGGGTCGAT
CATCGGCATCTCCATACCGACAAGGCATCCGGCGCGCGCGACGACCGACCAGGCCTGAAAGCCTGCCTCGACTATCTGAACGCGGGCGACACACTGATCG
TGTGGAAGCTCGACCGGCTCGGACGCTCGCTGCCGCACCTGCTGACGATCGTCACCGATCTGAAGGCGCGCGGCATCGCGTTCCGGTCGCTGACCGAGCA
GATGGATACGACCACGCCGCACGGCGAATTGCTGTTCTCGCTGTTCGGTGCATTGGCACAATATGAGCGTGCGCTCACGCGCGAACGGGTGATGGCGGGA
CTGGCTGCTGCCAAACGCCGGGGACGCCAAGGTGGCCGCCCGCCGATGATCGACGCCGAAACGCTCGAGCGGATCACCGCCGCGCTGGATGGCGGGGCCA
GCAAGGCGTCCGTCTGCCGGACCTTCAAGGTGCCGCGTTCGACCCTTCTCGGCACGCTTGCCCGGATCGGCTGGACCGCACCGGCCAAGGTCTAAGCCGA
TGCCGCGTCGCGCCGTCCTGTCGGACGAGCAACGCGCGGCGTTGCTCGCGCTTCCCGACGACGAAACCCTGCTCGTCCAGCACTGGACATTGAGCCGGGA
CGACTTGGCCATCATCGTCCGCCGGAGGCGACCGCATAACCGGCTGGGTTTCGCGATCCAGCTTTGCGCGCTGCGCTATCCTGGCCGTTTCCTGCGACCC
GGTGAACTGATCCCTGATACGCCGCTCGCGTTCGTCGCAGAGCAATTGCAGGTCGGACCCGAGGTGCTGGCCGACTACGCGACGCGCGGCCCGACCCGGT
ACGAACAGCTCGATGCACTGCGCGATGCATTCGGCTTCATGCCGCTCAGTCGGCCGCTGCGAACGACGTTGCAGGAATGGCTCCTGCCGATCGCGCTGAC
GACGACCAGCGGGGCTAGGCTGGCGCGCGTGATGCTGGATGAGTGCCGGCGACGGCGCATCATTGTGCCGGGCATCAGTTCGGTCGAGCGGATGGTCGCA
CAGGCGTTGCTCGATGCCGAACGCCATGTCGCCGAGCATCTGACCCGAGGACTCGATGCTCGACAGCGCCGGCTGCTCGATGCGCTTCTCCTGCCCCACA
CAGGCACGAACTTGAGCGATCTGGCCTGGGTGCGGCAGTCACCCGGCAAGCCCGGCCGAAAGACATTCGCCGCCATCATCGAGCGACTGACACTGCTTCG
GGCCATCGGGATCGATCCGGATATCGCCGTAGGCGTCCATCCCGAGCGCCTCCGACGCCTGTGCCAGGAAGGCGTGCGGCTGACCGCGCAACATGTTCGG
ACGCTGCAAGCGACGCGGCGTCGCGCCACATTGGTGGCGACCATCCTCGAAACCATCGTTACCCTCACCGACGATGCGGTGCTGATGTTCGATCGCCTGC
TTGGGCAGATGTTCCGGCGCGAACAGAACAGCGCGGACACGACACTCAAGCGCAACCGGCGCACCATCAACGGCAAAATCCGGCTGCTTGCCCAACTCGG
CGCTGCCTTGCTCGCCGCCAAGATATCAGGTGGCGATATCGGCGCTGCGGTCGAGGCAGCGATCGGATGGAATGATCTCGGCCGCGAGGTCGATGAAGCC
CGCAAGCTGATCCGCCCCGATTCGGTCGATCCCGTCGCGGTCGCCGCGACCAATTACCCCGTCCTCCGACAGGTCGGTCCCTCGTTCATCGCCTCGTTCA
CATTCGGGGCGGTGCCAGCCTGCCATGCGCTCGCGCGAGCGGTCGCGATCATGCGCGACCTTCATTTTGGTCATCTGCGCAAATTGCCTGCAGGCACGCC
AGTCGGCTTCATCCGGCAAGCTTGGCGTCGGGCGATCGGCACCGGCATTCCCGATCGCAGGATCTATGAATTGTGCGTGCTGGTCGAGCTTCGCGACCGG
CTTCGCGCCGGCGACATGTGGGTCGAGGGAAGCCGACGCTATCGTGCTGTCGAGCAGCAACTCATTCCTGCCCCCGTATTCGCCAACATGCGCGCGGCCG
GCCCCTTGCCGATACCGGCACCGGATACGGCCGATATCTGGCTGGCCGAACGACGCGCCCGCCTCGCCCGTCGATTGGCCGAGGTCGAGCGAAAGGCGGA
GACGGACGCGCTGGAAGACGTGCAGCTCAGCTTGGGCAGGCTGCGGATTTCGCCCTTGAAGGCGATTACTCCCGAGGAATCCGATACCGCCCTTGCGCCG
CTCTATGCGCATCTGCCCGCGATCCGCATCACCGACCTTCTTGCCGAAGTCGATCGATGGACCGGGTTCAGCCAGTGCTTCACGCATCTGCAAAGTGGCC
GTGCCGCGGATGAACCACGTGCGATCCTCACGGCGGTGCTCGCCGATGCCACCAATCTGGGCCATACGCGCATGGCGGAAGCCTGCAATCTCGTGACCCA
GCGCCAACTCGGTTGGCTCGCCTCATGGCATCTGCGCGAGGAAACCTACGGTCGCGCGCTCGCCCGGCTTGTCGACGCCCAACACACCGCGCCGCTGGCC
GCGCTGTTCGGGTCCGGCACCTCGTCCAGCTCAGACGGTCAGAACTTTCCGCTCGACCGCCGCGCCCAGGCAACCGGCGCAGTCAATCCGCACAAGGGGA
CAGAGCCGGCTGTCTCCTTTTACAGCCACGTCTCGGATCGCTACGCGCCGTTCCATTCCACAGTTATCTCCGCTTCGGCGAGCGAGGCGGCACAGGTGCT
CGACGGGCTGCTCCACCACGGCGCCGATCTGCACATCGAAGAGCATCACGTCGATGGCGGGGGCGTCTCCGACCATGTGTTCGCGCTATGTCATCTGCTT
GGGTTCCGGTTCGCGCCGCGTATCCCGAATATCGCCGCACGCCGTTTGCACCTGTTTAACGGCATCGAACCCGGCCCCGATATTGCGCCGCTGGTCGCGG
GCCGCATCGACGAAGGTCTGATCGAGGCACACTGGGACGACGTGCTGCGACTGGGAACCTCGATCCGCACAGGCGTCGTCAGCGCCTCGATCATGCTGGA
ACGGCTCGGCTCCTATCCACGCGCCAACGGCCTGGCACTGGCGTTGCGCGAGATCGGTCGCGTCGAGCGTACCCTGTTCACGCTCGACTGGATCGAGCAG
CCCGAACAGCGTCGCCGCGCCACCCGCGAACTCAACAAGGGAGAAGCGGAAAATGCCCTGAAACGCGCCATCTTCTTCCATCGCATCGGCCGTATCCGCG
ATCATGCGCTGCAAGCCCAAAGCCATCGGGCGAGCGCGCTGAACCTCGTCGCCGGTGCCATCGTCCTGTGGAACACGACCTACCTGCAAGCCGCCCGGAT
GCATCTCGCCAACCTCGGCCGGCCGGTCCCGCCGGACCTGCTGCAACACCTATCACCGCTCGGTTGGCAGCATATCAATCTCACCGGCGATTACCTCTGG
ACCGATCCCGATGCGCCATCCACCGCGCTCAGACCGCTTCGCCAGATGCGCGCCGTCGAAGGCACGGCAAAACCTTAGCGTATATCTGGGTCCGTTCTGT
GTACCGACCCC
Protein section
ORF number : 4
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 543 bp | 180 aa | 54 | 596 | + | No |
Annotation : DNA-binding transcriptional regulator, MarR familyDescription : Transcriptional Regulator factor
ORF sequence :
MNVLSDRLVNLFGALAVGITDRIKKAAFDPTIPGGGETTAAIVVIGHATGLSIDELGRVLGLSHAGTVRLVDRLVAAGFAVRSKALRDRRAVALMLTEAG
ETRLSAILQRRNETLSEILSHVSNADRLVLERIAETILAQMSDDAVSALTICRLCDERRCYNCPMDAFGMLESSTHRVDP
ETRLSAILQRRNETLSEILSHVSNADRLVLERIAETILAQMSDDAVSALTICRLCDERRCYNCPMDAFGMLESSTHRVDP
Blast result :ORF 2
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 477 bp | 158 aa | 701 | 1177 | + | No |
Annotation : membrane proteinDescription :
ORF sequence :
MFSTLHIAEKTTGSRGSLALLRWALVVIFLWFGCMKFTSYEAMGIAPLMKNSPIMSWIPAVFGVQGGSYFIGTVELATAAALIIGAFNKTASALGAAMSC
LTYAVTLTFFLSTPGVAEPTAGGFPAISAGTGQFLLKDLVLLAASACLLLASIRTADA
LTYAVTLTFFLSTPGVAEPTAGGFPAISAGTGQFLLKDLVLLAASACLLLASIRTADA
Blast result :ORF 3
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 585 bp | 194 aa | 1311 | 1895 | + | No |
AG : Tn3 resolvase
ORF sequence :
MLVGYMRVSTTDDRQTVDLQRDALVATGVDHRHLHTDKASGARDDRPGLKACLDYLNAGDTLIVWKLDRLGRSLPHLLTIVTDLKARGIAFRSLTEQMDT
TTPHGELLFSLFGALAQYERALTRERVMAGLAAAKRRGRQGGRPPMIDAETLERITAALDGGASKASVCRTFKVPRSTLLGTLARIGWTAPAKV
TTPHGELLFSLFGALAQYERALTRERVMAGLAAAKRRGRQGGRPPMIDAETLERITAALDGGASKASVCRTFKVPRSTLLGTLARIGWTAPAKV
Blast result :ORF 4
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 2979 bp | 992 aa | 1900 | 4878 | + | No |
Chemistry : DDE
ORF sequence :
MPRRAVLSDEQRAALLALPDDETLLVQHWTLSRDDLAIIVRRRRPHNRLGFAIQLCALRYPGRFLRPGELIPDTPLAFVAEQLQVGPEVLADYATRGPTR
YEQLDALRDAFGFMPLSRPLRTTLQEWLLPIALTTTSGARLARVMLDECRRRRIIVPGISSVERMVAQALLDAERHVAEHLTRGLDARQRRLLDALLLPH
TGTNLSDLAWVRQSPGKPGRKTFAAIIERLTLLRAIGIDPDIAVGVHPERLRRLCQEGVRLTAQHVRTLQATRRRATLVATILETIVTLTDDAVLMFDRL
LGQMFRREQNSADTTLKRNRRTINGKIRLLAQLGAALLAAKISGGDIGAAVEAAIGWNDLGREVDEARKLIRPDSVDPVAVAATNYPVLRQVGPSFIASF
TFGAVPACHALARAVAIMRDLHFGHLRKLPAGTPVGFIRQAWRRAIGTGIPDRRIYELCVLVELRDRLRAGDMWVEGSRRYRAVEQQLIPAPVFANMRAA
GPLPIPAPDTADIWLAERRARLARRLAEVERKAETDALEDVQLSLGRLRISPLKAITPEESDTALAPLYAHLPAIRITDLLAEVDRWTGFSQCFTHLQSG
RAADEPRAILTAVLADATNLGHTRMAEACNLVTQRQLGWLASWHLREETYGRALARLVDAQHTAPLAALFGSGTSSSSDGQNFPLDRRAQATGAVNPHKG
TEPAVSFYSHVSDRYAPFHSTVISASASEAAQVLDGLLHHGADLHIEEHHVDGGGVSDHVFALCHLLGFRFAPRIPNIAARRLHLFNGIEPGPDIAPLVA
GRIDEGLIEAHWDDVLRLGTSIRTGVVSASIMLERLGSYPRANGLALALREIGRVERTLFTLDWIEQPEQRRRATRELNKGEAENALKRAIFFHRIGRIR
DHALQAQSHRASALNLVAGAIVLWNTTYLQAARMHLANLGRPVPPDLLQHLSPLGWQHINLTGDYLWTDPDAPSTALRPLRQMRAVEGTAKP
YEQLDALRDAFGFMPLSRPLRTTLQEWLLPIALTTTSGARLARVMLDECRRRRIIVPGISSVERMVAQALLDAERHVAEHLTRGLDARQRRLLDALLLPH
TGTNLSDLAWVRQSPGKPGRKTFAAIIERLTLLRAIGIDPDIAVGVHPERLRRLCQEGVRLTAQHVRTLQATRRRATLVATILETIVTLTDDAVLMFDRL
LGQMFRREQNSADTTLKRNRRTINGKIRLLAQLGAALLAAKISGGDIGAAVEAAIGWNDLGREVDEARKLIRPDSVDPVAVAATNYPVLRQVGPSFIASF
TFGAVPACHALARAVAIMRDLHFGHLRKLPAGTPVGFIRQAWRRAIGTGIPDRRIYELCVLVELRDRLRAGDMWVEGSRRYRAVEQQLIPAPVFANMRAA
GPLPIPAPDTADIWLAERRARLARRLAEVERKAETDALEDVQLSLGRLRISPLKAITPEESDTALAPLYAHLPAIRITDLLAEVDRWTGFSQCFTHLQSG
RAADEPRAILTAVLADATNLGHTRMAEACNLVTQRQLGWLASWHLREETYGRALARLVDAQHTAPLAALFGSGTSSSSDGQNFPLDRRAQATGAVNPHKG
TEPAVSFYSHVSDRYAPFHSTVISASASEAAQVLDGLLHHGADLHIEEHHVDGGGVSDHVFALCHLLGFRFAPRIPNIAARRLHLFNGIEPGPDIAPLVA
GRIDEGLIEAHWDDVLRLGTSIRTGVVSASIMLERLGSYPRANGLALALREIGRVERTLFTLDWIEQPEQRRRATRELNKGEAENALKRAIFFHRIGRIR
DHALQAQSHRASALNLVAGAIVLWNTTYLQAARMHLANLGRPVPPDLLQHLSPLGWQHINLTGDYLWTDPDAPSTALRPLRQMRAVEGTAKP
Blast result :
Comments
The transposase of ISMpo10 is the ORF4, and is 61% aa similar to ISSod9.
References
1] Ming-Chun Lee and David Robinson (2009) Direct submission.
2] Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Kuske,C.R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Marx,C. and Richardson,P. (2008) Direct submission GenBank.
2] Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Chertkov,O., Brettin,T., Detter,J.C., Han,C., Kuske,C.R., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Marx,C. and Richardson,P. (2008) Direct submission GenBank.