ISBth15
- Family IS200/IS605
- Group IS1341
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Bacillus thuringiensis | Bacillus thuringiensis subsp. kurstaki YBT-1520 |
DNA section
IS Length : 1490 bp
Ends
Left end : GAAGAAACAGTTAGTGTATATCTACAAAAATATATAATTAGTGATAAAATATTTGTAGATGAAAAATTGTCGCCGGAGTAAAGTAGTTTCATGGGATGAA II struct. : No
Right end : CCTCGGAGTGTTACATCAAACGAAAGTAGCTTCTGTGAAATCGGACACGTAGAACAGGGAAATAAACAAAAATTATAGATTTTTATAAGTTTATGGCAAC II struct. : No
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
GCAGAAGTGAAAGAAGG | GGCGAATATACATATGTT |
DNA sequence
GAAGAAACAGTTAGTGTATATCTACAAAAATATATAATTAGTGATAAAATATTTGTAGATGAAAAATTGTCGCCGGAGTAAAGTAGTTTCATGGGATGAA
AAATATGAAAGTATATTCAATTGGTGATTTTGCAAAAAAAGGCAGGTAGGATAGAACAAACTAGTTGCCATCTTCAAGGGAAAATAAGCTAAGAAGATGG
TTAAGGGGTTGCTGGAAAATGATGCTTGCGAAGAAAGTGAGAATCAAGCCGAATAAAGAACAAGAATTGCAACTTTGGAAATCTGTTGGTACGGCAAGAT
GGGCTTATAATTGGACACTGGCGAAGCAAGAAGAGAATTACAAGAATGGCGGAAAGTTCATATCAGACGTTTTTTTACGGAAAGAATTAACTGTATTAAA
GCAGTCTGAAGAATATGCTTGGTTGTACGATGTTTCAAATAATATAGCCAAACAAGCGATTAAAGATGCTTGTGAAGCATATAAGCGATTTTTCAAGGGA
CTGGCTGATAAACCACGATTCAAAAGCAGAAGGAAAGCAAAACTCTCTTTTTACAATGATAATGTCAAGTTAAAAGTAAAAGAAAAACAAGTTTTGATTG
AGAAAGTTGGTTGGGTAAAAACATCCGAAAAGTTACCTGTAGGGGTTAAGTACTCTAATCCACGCGTTAGCTTTGACGGTAAGTATTGGTATTTGTCTGT
CGGTATTGAACAGGAGTTTACAAAAGAGAAATTAACGGCTGTTTCGTTAGGAATAGATATTGGAATCAAAGAATTAGCATATTGTTCTGATGGGCAGAGG
AAGAACAATATCAACAAAACAAAAATGGTAAGACAGGTAGAGAAACGCCTTCGTAGGTTGCAACGTCAAGTTTCTCGTAAATATGAAATGAATAAGGAGG
GAAACCGTTTTGTCAAAACAAGCAATATTATAAAAATCGAGAAAGAGATACGACAACTACATAGAAGGTTATCAAATATCAGAAAGAATCATCTTCATCA
ATCCACGAGCGAAATTGTGAAAACCAAGCCATTTCGCATTGTGATGGAGACGTTGCATATGAAAGGTCTGCTGAAGAATAGATACCTAGCTAAAGCGATT
GCGAAGCAGTGTTTATATGAGTTCAAAAGACAAATTCAATACAAGTGTGAAAAATATGGTATTGAATTTGTAGAAGCTGATACATGGTATCCTTCTTCAA
AAATGTGTTCCAGTTGTGGAAGCATTAACAAAGAACTAAAACTTTCTGACCGTGTATACAAATGCACTTGTGGTCACGAAATGGATAGGGATTTAAATGC
GGCTATCAATTTGTCACGGTATGAATTAGCCAGTTAACATCTAAAAAAGTTACGGCTAATATGTAGGATTCGTTGTATCCGAATTTACGCCCTCGGAGTG
TTACATCAAACGAAAGTAGCTTCTGTGAAATCGGACACGTAGAACAGGGAAATAAACAAAAATTATAGATTTTTATAAGTTTATGGCAAC
AAATATGAAAGTATATTCAATTGGTGATTTTGCAAAAAAAGGCAGGTAGGATAGAACAAACTAGTTGCCATCTTCAAGGGAAAATAAGCTAAGAAGATGG
TTAAGGGGTTGCTGGAAAATGATGCTTGCGAAGAAAGTGAGAATCAAGCCGAATAAAGAACAAGAATTGCAACTTTGGAAATCTGTTGGTACGGCAAGAT
GGGCTTATAATTGGACACTGGCGAAGCAAGAAGAGAATTACAAGAATGGCGGAAAGTTCATATCAGACGTTTTTTTACGGAAAGAATTAACTGTATTAAA
GCAGTCTGAAGAATATGCTTGGTTGTACGATGTTTCAAATAATATAGCCAAACAAGCGATTAAAGATGCTTGTGAAGCATATAAGCGATTTTTCAAGGGA
CTGGCTGATAAACCACGATTCAAAAGCAGAAGGAAAGCAAAACTCTCTTTTTACAATGATAATGTCAAGTTAAAAGTAAAAGAAAAACAAGTTTTGATTG
AGAAAGTTGGTTGGGTAAAAACATCCGAAAAGTTACCTGTAGGGGTTAAGTACTCTAATCCACGCGTTAGCTTTGACGGTAAGTATTGGTATTTGTCTGT
CGGTATTGAACAGGAGTTTACAAAAGAGAAATTAACGGCTGTTTCGTTAGGAATAGATATTGGAATCAAAGAATTAGCATATTGTTCTGATGGGCAGAGG
AAGAACAATATCAACAAAACAAAAATGGTAAGACAGGTAGAGAAACGCCTTCGTAGGTTGCAACGTCAAGTTTCTCGTAAATATGAAATGAATAAGGAGG
GAAACCGTTTTGTCAAAACAAGCAATATTATAAAAATCGAGAAAGAGATACGACAACTACATAGAAGGTTATCAAATATCAGAAAGAATCATCTTCATCA
ATCCACGAGCGAAATTGTGAAAACCAAGCCATTTCGCATTGTGATGGAGACGTTGCATATGAAAGGTCTGCTGAAGAATAGATACCTAGCTAAAGCGATT
GCGAAGCAGTGTTTATATGAGTTCAAAAGACAAATTCAATACAAGTGTGAAAAATATGGTATTGAATTTGTAGAAGCTGATACATGGTATCCTTCTTCAA
AAATGTGTTCCAGTTGTGGAAGCATTAACAAAGAACTAAAACTTTCTGACCGTGTATACAAATGCACTTGTGGTCACGAAATGGATAGGGATTTAAATGC
GGCTATCAATTTGTCACGGTATGAATTAGCCAGTTAACATCTAAAAAAGTTACGGCTAATATGTAGGATTCGTTGTATCCGAATTTACGCCCTCGGAGTG
TTACATCAAACGAAAGTAGCTTCTGTGAAATCGGACACGTAGAACAGGGAAATAAACAAAAATTATAGATTTTTATAAGTTTATGGCAAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1119 bp | 372 aa | 219 | 1337 | + | No |
AG : TnpB
ORF sequence :
MMLAKKVRIKPNKEQELQLWKSVGTARWAYNWTLAKQEENYKNGGKFISDVFLRKELTVLKQSEEYAWLYDVSNNIAKQAIKDACEAYKRFFKGLADKPR
FKSRRKAKLSFYNDNVKLKVKEKQVLIEKVGWVKTSEKLPVGVKYSNPRVSFDGKYWYLSVGIEQEFTKEKLTAVSLGIDIGIKELAYCSDGQRKNNINK
TKMVRQVEKRLRRLQRQVSRKYEMNKEGNRFVKTSNIIKIEKEIRQLHRRLSNIRKNHLHQSTSEIVKTKPFRIVMETLHMKGLLKNRYLAKAIAKQCLY
EFKRQIQYKCEKYGIEFVEADTWYPSSKMCSSCGSINKELKLSDRVYKCTCGHEMDRDLNAAINLSRYELAS
FKSRRKAKLSFYNDNVKLKVKEKQVLIEKVGWVKTSEKLPVGVKYSNPRVSFDGKYWYLSVGIEQEFTKEKLTAVSLGIDIGIKELAYCSDGQRKNNINK
TKMVRQVEKRLRRLQRQVSRKYEMNKEGNRFVKTSNIIKIEKEIRQLHRRLSNIRKNHLHQSTSEIVKTKPFRIVMETLHMKGLLKNRYLAKAIAKQCLY
EFKRQIQYKCEKYGIEFVEADTWYPSSKMCSSCGSINKELKLSDRVYKCTCGHEMDRDLNAAINLSRYELAS
Blast result :
Comments
ISBth15 is 70% aa similar to ISCbt4.
References
1] ISfinder annotation (2009)
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.