ISBth15

  • Family IS200/IS605
  • Group IS1341
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Bacillus thuringiensis
Bacillus thuringiensis subsp. kurstaki YBT-1520
DNA section
IS Length : 1490 bp

Ends


Left end : GAAGAAACAGTTAGTGTATATCTACAAAAATATATAATTAGTGATAAAATATTTGTAGATGAAAAATTGTCGCCGGAGTAAAGTAGTTTCATGGGATGAA II struct. : No
Right end : CCTCGGAGTGTTACATCAAACGAAAGTAGCTTCTGTGAAATCGGACACGTAGAACAGGGAAATAAACAAAAATTATAGATTTTTATAAGTTTATGGCAAC II struct. : No

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
GCAGAAGTGAAAGAAGGGGCGAATATACATATGTT

DNA sequence

GAAGAAACAGTTAGTGTATATCTACAAAAATATATAATTAGTGATAAAATATTTGTAGATGAAAAATTGTCGCCGGAGTAAAGTAGTTTCATGGGATGAA
AAATATGAAAGTATATTCAATTGGTGATTTTGCAAAAAAAGGCAGGTAGGATAGAACAAACTAGTTGCCATCTTCAAGGGAAAATAAGCTAAGAAGATGG
TTAAGGGGTTGCTGGAAAATGATGCTTGCGAAGAAAGTGAGAATCAAGCCGAATAAAGAACAAGAATTGCAACTTTGGAAATCTGTTGGTACGGCAAGAT
GGGCTTATAATTGGACACTGGCGAAGCAAGAAGAGAATTACAAGAATGGCGGAAAGTTCATATCAGACGTTTTTTTACGGAAAGAATTAACTGTATTAAA
GCAGTCTGAAGAATATGCTTGGTTGTACGATGTTTCAAATAATATAGCCAAACAAGCGATTAAAGATGCTTGTGAAGCATATAAGCGATTTTTCAAGGGA
CTGGCTGATAAACCACGATTCAAAAGCAGAAGGAAAGCAAAACTCTCTTTTTACAATGATAATGTCAAGTTAAAAGTAAAAGAAAAACAAGTTTTGATTG
AGAAAGTTGGTTGGGTAAAAACATCCGAAAAGTTACCTGTAGGGGTTAAGTACTCTAATCCACGCGTTAGCTTTGACGGTAAGTATTGGTATTTGTCTGT
CGGTATTGAACAGGAGTTTACAAAAGAGAAATTAACGGCTGTTTCGTTAGGAATAGATATTGGAATCAAAGAATTAGCATATTGTTCTGATGGGCAGAGG
AAGAACAATATCAACAAAACAAAAATGGTAAGACAGGTAGAGAAACGCCTTCGTAGGTTGCAACGTCAAGTTTCTCGTAAATATGAAATGAATAAGGAGG
GAAACCGTTTTGTCAAAACAAGCAATATTATAAAAATCGAGAAAGAGATACGACAACTACATAGAAGGTTATCAAATATCAGAAAGAATCATCTTCATCA
ATCCACGAGCGAAATTGTGAAAACCAAGCCATTTCGCATTGTGATGGAGACGTTGCATATGAAAGGTCTGCTGAAGAATAGATACCTAGCTAAAGCGATT
GCGAAGCAGTGTTTATATGAGTTCAAAAGACAAATTCAATACAAGTGTGAAAAATATGGTATTGAATTTGTAGAAGCTGATACATGGTATCCTTCTTCAA
AAATGTGTTCCAGTTGTGGAAGCATTAACAAAGAACTAAAACTTTCTGACCGTGTATACAAATGCACTTGTGGTCACGAAATGGATAGGGATTTAAATGC
GGCTATCAATTTGTCACGGTATGAATTAGCCAGTTAACATCTAAAAAAGTTACGGCTAATATGTAGGATTCGTTGTATCCGAATTTACGCCCTCGGAGTG
TTACATCAAACGAAAGTAGCTTCTGTGAAATCGGACACGTAGAACAGGGAAATAAACAAAAATTATAGATTTTTATAAGTTTATGGCAAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1119 bp372 aa2191337+No
ORF function : Accessory Gene
AG : TnpB

ORF sequence :

MMLAKKVRIKPNKEQELQLWKSVGTARWAYNWTLAKQEENYKNGGKFISDVFLRKELTVLKQSEEYAWLYDVSNNIAKQAIKDACEAYKRFFKGLADKPR
FKSRRKAKLSFYNDNVKLKVKEKQVLIEKVGWVKTSEKLPVGVKYSNPRVSFDGKYWYLSVGIEQEFTKEKLTAVSLGIDIGIKELAYCSDGQRKNNINK
TKMVRQVEKRLRRLQRQVSRKYEMNKEGNRFVKTSNIIKIEKEIRQLHRRLSNIRKNHLHQSTSEIVKTKPFRIVMETLHMKGLLKNRYLAKAIAKQCLY
EFKRQIQYKCEKYGIEFVEADTWYPSSKMCSSCGSINKELKLSDRVYKCTCGHEMDRDLNAAINLSRYELAS

 

Blast result :
Comments
ISBth15 is 70% aa similar to ISCbt4.
References
1] ISfinder annotation (2009)
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.