ISBth14

  • Family IS200/IS605
  • Group IS1341
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Bacillus thuringiensis
Bacillus thuringiensis subsp. kurstaki YBT-1520
DNA section
IS Length : 1664 bp

Ends


Left end : CATGCCTTTCGAGAGGACTCCCATCTCTAAACGTAAATGAAGGTGGTGAGGTGAATTGAAAGGAATATTTTATTTTTGAGAAAAAAACGGAAACGTATGT II struct. : Yes
Right end : ACAGCTCGCTAATGTGTTAACTCCCCTGACGTTAATCGTCCGTTAGGTCGAAACGTTAGAAACCCCCACTTCAAGCTTTGTTAAGTGGGGGAGTGTTCAT II struct. : Yes

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
TTTTTTCTATATGCTATAATGTAGAAACATCAT

DNA sequence

CATGCCTTTCGAGAGGACTCCCATCTCTAAACGTAAATGAAGGTGGTGAGGTGAATTGAAAGGAATATTTTATTTTTGAGAAAAAAACGGAAACGTATGT
TCTTTTTTGCTATAATATCCTTAACAAGGAGGTGAATAAAATGGCAAAAGAAAATCCATCAAACTATAAAACTCTTCAAATCTGGATAAAAAAAGGGCAT
CGTATGTATTCTTATTTTCAAGAATGTTGTCATAACGCTAAGAATATGTACAACACCACAAACTTTTATATACGCCAGGTGTACACTGGATTAACACAAG
AAAAAGAGTTGCAGCCTTTGCAAAAAGAAGTTCTGGATAATATTCATAAAAATATTGGGAAGATGAATGACACACAACGTCTTGTCTATCGGAAGAAATT
GGAAAAAGAGAAAGTAAAGCCTAAAGAAGAACAGAAAGAGATTACATGTAATTTGTTTTCAGAACCTAATTTTGAAAAACCTTATGTAGATTACAACTTT
CTAGATGCACTATTTAAGGCTATGATTCAAAATGATTATCGAGCTTTGCCTACGCAATGTAGCCAGTCCATCATGAAAGGTTTGTTCCAAAATTGGAAAT
CTTTTTTTGCTAGTTTAAAAGACTATAAAAAGAATCCAAACAAATATGATGGAATGCCTAGGATTCCAAAGTATATTCGTTCTTCTGAAAAAGAGATTCT
GTATACAAACCAAGATTGCATCATTAAAAACGGTAGATTTTTAAAGTTTCCAAAGACGAAATTGCAATTAAATATTGGGAAACTAGGTTTCACTGAAGGT
AAACTGAAACAAGTTCGTGTGATTCCAAAATACAATGAATATGTAGTGGAATTGGTAATTGATGTTCCTTCTGAACAACAAATGATTGAAGAGAATGCTC
GTTATATGAGTATTGATTTAGGGATTGATAACCTTGCAACCATCGTAACAAACACAGGTATGAAACCTGTCCTTGTTAAGGGCAAACATGTCAAAAGCAT
AAATCAATATTACAACAAAATGAAGAGTCATTTTACAAGCATTCTTAGAAATGGAAAACAAACGAATGAAGGACCTTTTACTTCTAAAAGGATAGAAAAA
CTTCATCAAAAACGTTACTTGAAAATAAAAGACGTCTTCCATAAAGTTAGTCACCACATCGTAAAACTAGCTCAAGAAGAAGAAGTTTGTAAAATCGTTA
TTGGTCAAAACAAAAGTTGGAAACAAGAAACGAATATGGGAAAAAGAAATAACCAATCGTTTTGTCATATCCCGCATAATTTACTGATTCAAATGATTAC
ATACAAAGCAAATGCTGTAGGCATTCAAGTTGTTGTAACTGAAGAATCATATACATCGAAAGCAAGTTTTCTGGATAACGACTTCATTCCAACGTATGGA
GAAAATGACCAAAATACAACTTTTTCAGGAAAACGAATAAAGCGCGGTATATATCGTTCAGCAAATAAAACTTTAATTAATGCAGATGTAAATGCTGCGG
CTAACATTTTACGAAAAGTAATCCCAAATGCATGGACAAATGGGATAGAGGGGTTAGGCGTGAAACAGCTCGCTAATGTGTTAACTCCCCTGACGTTAAT
CGTCCGTTAGGTCGAAACGTTAGAAACCCCCACTTCAAGCTTTGTTAAGTGGGGGAGTGTTCAT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1470 bp489 aa1411610+No
ORF function : Accessory Gene
AG : TnpB

ORF sequence :

MAKENPSNYKTLQIWIKKGHRMYSYFQECCHNAKNMYNTTNFYIRQVYTGLTQEKELQPLQKEVLDNIHKNIGKMNDTQRLVYRKKLEKEKVKPKEEQKE
ITCNLFSEPNFEKPYVDYNFLDALFKAMIQNDYRALPTQCSQSIMKGLFQNWKSFFASLKDYKKNPNKYDGMPRIPKYIRSSEKEILYTNQDCIIKNGRF
LKFPKTKLQLNIGKLGFTEGKLKQVRVIPKYNEYVVELVIDVPSEQQMIEENARYMSIDLGIDNLATIVTNTGMKPVLVKGKHVKSINQYYNKMKSHFTS
ILRNGKQTNEGPFTSKRIEKLHQKRYLKIKDVFHKVSHHIVKLAQEEEVCKIVIGQNKSWKQETNMGKRNNQSFCHIPHNLLIQMITYKANAVGIQVVVT
EESYTSKASFLDNDFIPTYGENDQNTTFSGKRIKRGIYRSANKTLINADVNAAANILRKVIPNAWTNGIEGLGVKQLANVLTPLTLIVR

 

Blast result :
Comments
ISBth14 is 54% aa similar to ISTvo1. There is no transposase, only the ORFB .
References
1] ISfinder annotation (2009)
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.