ISBth14
- Family IS200/IS605
- Group IS1341
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Bacillus thuringiensis | Bacillus thuringiensis subsp. kurstaki YBT-1520 |
DNA section
IS Length : 1664 bp
Ends
Left end : CATGCCTTTCGAGAGGACTCCCATCTCTAAACGTAAATGAAGGTGGTGAGGTGAATTGAAAGGAATATTTTATTTTTGAGAAAAAAACGGAAACGTATGT II struct. : Yes
Right end : ACAGCTCGCTAATGTGTTAACTCCCCTGACGTTAATCGTCCGTTAGGTCGAAACGTTAGAAACCCCCACTTCAAGCTTTGTTAAGTGGGGGAGTGTTCAT II struct. : Yes
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
TTTTTT | CTAT | ATGCTATAATGTAGAAACA | TCAT |
DNA sequence
CATGCCTTTCGAGAGGACTCCCATCTCTAAACGTAAATGAAGGTGGTGAGGTGAATTGAAAGGAATATTTTATTTTTGAGAAAAAAACGGAAACGTATGT
TCTTTTTTGCTATAATATCCTTAACAAGGAGGTGAATAAAATGGCAAAAGAAAATCCATCAAACTATAAAACTCTTCAAATCTGGATAAAAAAAGGGCAT
CGTATGTATTCTTATTTTCAAGAATGTTGTCATAACGCTAAGAATATGTACAACACCACAAACTTTTATATACGCCAGGTGTACACTGGATTAACACAAG
AAAAAGAGTTGCAGCCTTTGCAAAAAGAAGTTCTGGATAATATTCATAAAAATATTGGGAAGATGAATGACACACAACGTCTTGTCTATCGGAAGAAATT
GGAAAAAGAGAAAGTAAAGCCTAAAGAAGAACAGAAAGAGATTACATGTAATTTGTTTTCAGAACCTAATTTTGAAAAACCTTATGTAGATTACAACTTT
CTAGATGCACTATTTAAGGCTATGATTCAAAATGATTATCGAGCTTTGCCTACGCAATGTAGCCAGTCCATCATGAAAGGTTTGTTCCAAAATTGGAAAT
CTTTTTTTGCTAGTTTAAAAGACTATAAAAAGAATCCAAACAAATATGATGGAATGCCTAGGATTCCAAAGTATATTCGTTCTTCTGAAAAAGAGATTCT
GTATACAAACCAAGATTGCATCATTAAAAACGGTAGATTTTTAAAGTTTCCAAAGACGAAATTGCAATTAAATATTGGGAAACTAGGTTTCACTGAAGGT
AAACTGAAACAAGTTCGTGTGATTCCAAAATACAATGAATATGTAGTGGAATTGGTAATTGATGTTCCTTCTGAACAACAAATGATTGAAGAGAATGCTC
GTTATATGAGTATTGATTTAGGGATTGATAACCTTGCAACCATCGTAACAAACACAGGTATGAAACCTGTCCTTGTTAAGGGCAAACATGTCAAAAGCAT
AAATCAATATTACAACAAAATGAAGAGTCATTTTACAAGCATTCTTAGAAATGGAAAACAAACGAATGAAGGACCTTTTACTTCTAAAAGGATAGAAAAA
CTTCATCAAAAACGTTACTTGAAAATAAAAGACGTCTTCCATAAAGTTAGTCACCACATCGTAAAACTAGCTCAAGAAGAAGAAGTTTGTAAAATCGTTA
TTGGTCAAAACAAAAGTTGGAAACAAGAAACGAATATGGGAAAAAGAAATAACCAATCGTTTTGTCATATCCCGCATAATTTACTGATTCAAATGATTAC
ATACAAAGCAAATGCTGTAGGCATTCAAGTTGTTGTAACTGAAGAATCATATACATCGAAAGCAAGTTTTCTGGATAACGACTTCATTCCAACGTATGGA
GAAAATGACCAAAATACAACTTTTTCAGGAAAACGAATAAAGCGCGGTATATATCGTTCAGCAAATAAAACTTTAATTAATGCAGATGTAAATGCTGCGG
CTAACATTTTACGAAAAGTAATCCCAAATGCATGGACAAATGGGATAGAGGGGTTAGGCGTGAAACAGCTCGCTAATGTGTTAACTCCCCTGACGTTAAT
CGTCCGTTAGGTCGAAACGTTAGAAACCCCCACTTCAAGCTTTGTTAAGTGGGGGAGTGTTCAT
TCTTTTTTGCTATAATATCCTTAACAAGGAGGTGAATAAAATGGCAAAAGAAAATCCATCAAACTATAAAACTCTTCAAATCTGGATAAAAAAAGGGCAT
CGTATGTATTCTTATTTTCAAGAATGTTGTCATAACGCTAAGAATATGTACAACACCACAAACTTTTATATACGCCAGGTGTACACTGGATTAACACAAG
AAAAAGAGTTGCAGCCTTTGCAAAAAGAAGTTCTGGATAATATTCATAAAAATATTGGGAAGATGAATGACACACAACGTCTTGTCTATCGGAAGAAATT
GGAAAAAGAGAAAGTAAAGCCTAAAGAAGAACAGAAAGAGATTACATGTAATTTGTTTTCAGAACCTAATTTTGAAAAACCTTATGTAGATTACAACTTT
CTAGATGCACTATTTAAGGCTATGATTCAAAATGATTATCGAGCTTTGCCTACGCAATGTAGCCAGTCCATCATGAAAGGTTTGTTCCAAAATTGGAAAT
CTTTTTTTGCTAGTTTAAAAGACTATAAAAAGAATCCAAACAAATATGATGGAATGCCTAGGATTCCAAAGTATATTCGTTCTTCTGAAAAAGAGATTCT
GTATACAAACCAAGATTGCATCATTAAAAACGGTAGATTTTTAAAGTTTCCAAAGACGAAATTGCAATTAAATATTGGGAAACTAGGTTTCACTGAAGGT
AAACTGAAACAAGTTCGTGTGATTCCAAAATACAATGAATATGTAGTGGAATTGGTAATTGATGTTCCTTCTGAACAACAAATGATTGAAGAGAATGCTC
GTTATATGAGTATTGATTTAGGGATTGATAACCTTGCAACCATCGTAACAAACACAGGTATGAAACCTGTCCTTGTTAAGGGCAAACATGTCAAAAGCAT
AAATCAATATTACAACAAAATGAAGAGTCATTTTACAAGCATTCTTAGAAATGGAAAACAAACGAATGAAGGACCTTTTACTTCTAAAAGGATAGAAAAA
CTTCATCAAAAACGTTACTTGAAAATAAAAGACGTCTTCCATAAAGTTAGTCACCACATCGTAAAACTAGCTCAAGAAGAAGAAGTTTGTAAAATCGTTA
TTGGTCAAAACAAAAGTTGGAAACAAGAAACGAATATGGGAAAAAGAAATAACCAATCGTTTTGTCATATCCCGCATAATTTACTGATTCAAATGATTAC
ATACAAAGCAAATGCTGTAGGCATTCAAGTTGTTGTAACTGAAGAATCATATACATCGAAAGCAAGTTTTCTGGATAACGACTTCATTCCAACGTATGGA
GAAAATGACCAAAATACAACTTTTTCAGGAAAACGAATAAAGCGCGGTATATATCGTTCAGCAAATAAAACTTTAATTAATGCAGATGTAAATGCTGCGG
CTAACATTTTACGAAAAGTAATCCCAAATGCATGGACAAATGGGATAGAGGGGTTAGGCGTGAAACAGCTCGCTAATGTGTTAACTCCCCTGACGTTAAT
CGTCCGTTAGGTCGAAACGTTAGAAACCCCCACTTCAAGCTTTGTTAAGTGGGGGAGTGTTCAT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1470 bp | 489 aa | 141 | 1610 | + | No |
AG : TnpB
ORF sequence :
MAKENPSNYKTLQIWIKKGHRMYSYFQECCHNAKNMYNTTNFYIRQVYTGLTQEKELQPLQKEVLDNIHKNIGKMNDTQRLVYRKKLEKEKVKPKEEQKE
ITCNLFSEPNFEKPYVDYNFLDALFKAMIQNDYRALPTQCSQSIMKGLFQNWKSFFASLKDYKKNPNKYDGMPRIPKYIRSSEKEILYTNQDCIIKNGRF
LKFPKTKLQLNIGKLGFTEGKLKQVRVIPKYNEYVVELVIDVPSEQQMIEENARYMSIDLGIDNLATIVTNTGMKPVLVKGKHVKSINQYYNKMKSHFTS
ILRNGKQTNEGPFTSKRIEKLHQKRYLKIKDVFHKVSHHIVKLAQEEEVCKIVIGQNKSWKQETNMGKRNNQSFCHIPHNLLIQMITYKANAVGIQVVVT
EESYTSKASFLDNDFIPTYGENDQNTTFSGKRIKRGIYRSANKTLINADVNAAANILRKVIPNAWTNGIEGLGVKQLANVLTPLTLIVR
ITCNLFSEPNFEKPYVDYNFLDALFKAMIQNDYRALPTQCSQSIMKGLFQNWKSFFASLKDYKKNPNKYDGMPRIPKYIRSSEKEILYTNQDCIIKNGRF
LKFPKTKLQLNIGKLGFTEGKLKQVRVIPKYNEYVVELVIDVPSEQQMIEENARYMSIDLGIDNLATIVTNTGMKPVLVKGKHVKSINQYYNKMKSHFTS
ILRNGKQTNEGPFTSKRIEKLHQKRYLKIKDVFHKVSHHIVKLAQEEEVCKIVIGQNKSWKQETNMGKRNNQSFCHIPHNLLIQMITYKANAVGIQVVVT
EESYTSKASFLDNDFIPTYGENDQNTTFSGKRIKRGIYRSANKTLINADVNAAANILRKVIPNAWTNGIEGLGVKQLANVLTPLTLIVR
Blast result :
Comments
ISBth14 is 54% aa similar to ISTvo1. There is no transposase, only the ORFB .
References
1] ISfinder annotation (2009)
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.
2] Ziniu Y., Qiu S. (2009) Direct submission to ISfinder.