ISPfr14
- Family IS30
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Propionibacterium freudenreichii | Propionibacterium freudenreichii |
DNA section
IS Length : 1490 bp
Ends
IR Length : 20/22
IRL : TTCAACTGGTCGTCGCAACACCTTGACGTGGAAGGTGTTGGCGATGGCAG
IRR : TTCAACCAGTCGTTGCAACACCGGCTTGTTCGAGTGATCGTAGTTGCTCG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACGCCGGATCCCAAGGCGGA | CCTGCCCAATACACATCCGT | 0 |
DNA sequence
TTCAACTGGTCGTCGCAACACCTTGACGTGGAAGGTGTTGGCGATGGCAGCGAACGACAGGGACCAGAGCACGAGGGACGCGCCACAGGTGTTGCGGCGC
CAGTGGCGTGCAGATCGAGCGTTGCGCCCACCGATGCGTTCCCCTGGGCGCCCACGCCAGTCACCTTCGCGGCGAGTCGAACGGCAGTTTTGGCGCCAGA
TCGCCACGGGCGTCACAACGGCGGAAGCCTCCCTCGCGGTCGGCGTGTCGTGCCCCGTCGGTGCGCGCTGGTTTCGACACGCTGGCGGCATGCCACCGAT
CAGCCTGGCCGAGCCGTCCGGGCGCTATCTCAGTTTCGAAGAACGTGAAGAGATCGCGATCCTGAACGCCAAAGGCGTCGGCGTGCGCGCGATCGCTCGC
CAGCTGGGGCGTGATGCAGGCACGATCAGCCGTGAACTACGCCGTAACGCCGCCACCCGTAGCGGCCGAATCGAGTACCGGGCCACGGTCGCGCAGTGGA
AAGCGCAAGAAGCAGCGAAACGCCCGAAGATCGCGAAGTTGGTTAGGAACGAGCGTCTACGCGACTACGTCCAAGACCGCCTTGCCGGCGGGGTCACCCA
TCCTGACGGCACGCCCGTGGCGGGCCCGGCCGCGCCGGCGTGGAAGGGGTTGAACAAGCCGCGCAGGCAGGATCGGCGCTGGGCCAGTTCGTGGAGCCCG
GAGCAGATCAGTCATCGGCTGCGGTTGGACTTCCCCGATGATGAGTCCATGCGCATCAGCCATGAGGCGATCTATCAGTCGTTGTTCATCGAAGGGCGCG
GCGCGTTGAAACGCGAACTCGTCGCCTGTCTGCGCACCGGCCGCGCGTTGCGTGAACCGCGGGAGCGTTCACGGAACAAGCCCCAGGGCCATGTCAGCGC
TGAGGTGGTCATCAGCCAGCGGCCCGCCGAAGCGCAAGACCGTGCCGTGCCAGGCCATTGGGAGGGCGACCTCATCATCGGTACCGGCCGCTCCGCGATC
GGCACGCTCGTCGAGCGTCGTAGCCGCACCACGATCCTCGTACATCTTCCTCGACTTGAAGGCTGGGGTGAGCAGCCGCCGGTAAAGAAAGGCCCGTCGC
TGGGCGGCTACGGCGCGCAGGCGATGAACAAGGCGTTGAGCGCGTCGATCACGTCGCTTCCGCAGCAAGTGCGTCAGACGATCACGTGGGATCGGGGTAA
GGAACTGTCCGGGCACGCCCAGTTCACGCTGGAGACCGGCACGCGCGTGTTCTTCGCCGACCCGCACTCGCCGTGGCAGCGACCGACGAACGAGAACACC
AACGGTGTGCTGCGCCAGTACTTCCCCAAGGGCACTGACCTGTCCCGATGGAGCGCGAACGACCTTGAAGCTGTCGCTCACACCCTCAACAACCGGCCAC
GCAAAGTCCTCGGCTGGCGAACCCCCGCAGAGGTCTTCGACGAGCAACTACGATCACTCGAACAAGCCGGTGTTGCAACGACTGGTTGAA
CAGTGGCGTGCAGATCGAGCGTTGCGCCCACCGATGCGTTCCCCTGGGCGCCCACGCCAGTCACCTTCGCGGCGAGTCGAACGGCAGTTTTGGCGCCAGA
TCGCCACGGGCGTCACAACGGCGGAAGCCTCCCTCGCGGTCGGCGTGTCGTGCCCCGTCGGTGCGCGCTGGTTTCGACACGCTGGCGGCATGCCACCGAT
CAGCCTGGCCGAGCCGTCCGGGCGCTATCTCAGTTTCGAAGAACGTGAAGAGATCGCGATCCTGAACGCCAAAGGCGTCGGCGTGCGCGCGATCGCTCGC
CAGCTGGGGCGTGATGCAGGCACGATCAGCCGTGAACTACGCCGTAACGCCGCCACCCGTAGCGGCCGAATCGAGTACCGGGCCACGGTCGCGCAGTGGA
AAGCGCAAGAAGCAGCGAAACGCCCGAAGATCGCGAAGTTGGTTAGGAACGAGCGTCTACGCGACTACGTCCAAGACCGCCTTGCCGGCGGGGTCACCCA
TCCTGACGGCACGCCCGTGGCGGGCCCGGCCGCGCCGGCGTGGAAGGGGTTGAACAAGCCGCGCAGGCAGGATCGGCGCTGGGCCAGTTCGTGGAGCCCG
GAGCAGATCAGTCATCGGCTGCGGTTGGACTTCCCCGATGATGAGTCCATGCGCATCAGCCATGAGGCGATCTATCAGTCGTTGTTCATCGAAGGGCGCG
GCGCGTTGAAACGCGAACTCGTCGCCTGTCTGCGCACCGGCCGCGCGTTGCGTGAACCGCGGGAGCGTTCACGGAACAAGCCCCAGGGCCATGTCAGCGC
TGAGGTGGTCATCAGCCAGCGGCCCGCCGAAGCGCAAGACCGTGCCGTGCCAGGCCATTGGGAGGGCGACCTCATCATCGGTACCGGCCGCTCCGCGATC
GGCACGCTCGTCGAGCGTCGTAGCCGCACCACGATCCTCGTACATCTTCCTCGACTTGAAGGCTGGGGTGAGCAGCCGCCGGTAAAGAAAGGCCCGTCGC
TGGGCGGCTACGGCGCGCAGGCGATGAACAAGGCGTTGAGCGCGTCGATCACGTCGCTTCCGCAGCAAGTGCGTCAGACGATCACGTGGGATCGGGGTAA
GGAACTGTCCGGGCACGCCCAGTTCACGCTGGAGACCGGCACGCGCGTGTTCTTCGCCGACCCGCACTCGCCGTGGCAGCGACCGACGAACGAGAACACC
AACGGTGTGCTGCGCCAGTACTTCCCCAAGGGCACTGACCTGTCCCGATGGAGCGCGAACGACCTTGAAGCTGTCGCTCACACCCTCAACAACCGGCCAC
GCAAAGTCCTCGGCTGGCGAACCCCCGCAGAGGTCTTCGACGAGCAACTACGATCACTCGAACAAGCCGGTGTTGCAACGACTGGTTGAA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1200 bp | 399 aa | 290 | 1489 | + | No |
Chemistry : DDE
ORF sequence :
MPPISLAEPSGRYLSFEEREEIAILNAKGVGVRAIARQLGRDAGTISRELRRNAATRSGRIEYRATVAQWKAQEAAKRPKIAKLVRNERLRDYVQDRLAG
GVTHPDGTPVAGPAAPAWKGLNKPRRQDRRWASSWSPEQISHRLRLDFPDDESMRISHEAIYQSLFIEGRGALKRELVACLRTGRALREPRERSRNKPQG
HVSAEVVISQRPAEAQDRAVPGHWEGDLIIGTGRSAIGTLVERRSRTTILVHLPRLEGWGEQPPVKKGPSLGGYGAQAMNKALSASITSLPQQVRQTITW
DRGKELSGHAQFTLETGTRVFFADPHSPWQRPTNENTNGVLRQYFPKGTDLSRWSANDLEAVAHTLNNRPRKVLGWRTPAEVFDEQLRSLEQAGVATTG
GVTHPDGTPVAGPAAPAWKGLNKPRRQDRRWASSWSPEQISHRLRLDFPDDESMRISHEAIYQSLFIEGRGALKRELVACLRTGRALREPRERSRNKPQG
HVSAEVVISQRPAEAQDRAVPGHWEGDLIIGTGRSAIGTLVERRSRTTILVHLPRLEGWGEQPPVKKGPSLGGYGAQAMNKALSASITSLPQQVRQTITW
DRGKELSGHAQFTLETGTRVFFADPHSPWQRPTNENTNGVLRQYFPKGTDLSRWSANDLEAVAHTLNNRPRKVLGWRTPAEVFDEQLRSLEQAGVATTG
Blast result :
Comments
ISPfr14 is 89% aa similar to ISPfr9.
References
1] ISfinder annotation (2009)