ISMae10

  • Family IS1634
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) ISMae31
Accession numberTranspositionOriginHost
NC_010296 ND Microcystis aeruginosa
Microcystis aeruginosa NIES-843
DNA section
IS Length : 2073 bp

Ends


IR Length : 27/28

IRL : CCCACATTCCGCACCCTCAACTGTCACATAAGCTGTCCCCCTCCAGAGAC
IRR : CCCACATTCCGCACCCTAAGTGTCACAACGTCTCAAAAGAGGAAGGGGCG

Insertion site


Left flankDirect repeatRight flankDR Length
CATTCGTCCTCTTTAAGGGGGAATAA6

DNA sequence

CCCACATTCCGCACCCTCAACTGTCACATAAGCTGTCCCCCTCCAGAGACTTGAGTAAAAATACTTAGCTGGTGAAGGTTTTCTCGGTGGCCGCTAGGGG
GGCTTTGAGACCCTAATTATGAAAAAATAGGAATTGTTGGAAAACTGAGGCGAGTGGGCTGTTCGACCATGAATCAATCAACAGAAATTGAAGTCAAAAA
TCTAGACCATCTGGGATTAGTAGCCGGAATTATCGATGAAATAGGAATCGTTGAAATTATCAACGAACAAGTCTCAATTGAGCGAGGAGAAATTGTCACA
GCGGGGCAAGTCGTGAAAGCAATTATCCTGAATGGATTGGGATTTGTCTCCCGAGCCTTGTATTTATTTCCTCAATTTTTTGAAGATAAAGCAACCGAAC
ATTTGCTGGGAGAGGGCATCGAACCAAAACACCTGAATGATGATAAAATTGGTCGAGTAATGGACAAACTTTATCAACTTAATGTTTCGGTCATTTTCCT
ACGGATTAGTTTAGCGGCCGTGAAAAAATTTGGTGTAGCAACCGAGAACTCCCATTTAGATTCGACTTCTCTATCAGTAGAAGGAGAATATAAAAAGGAA
TACCCAACAGTAGAAATCCTGAAATCAGGAGCAGTGGGAGAAGAAATTGAAACCAGACAACAGCCAATAAAAATTACCTACGGATACTCCCGCGACCGAA
GACCTGACTTAAAACAATTTATGATTGACTTAATCGTAAGTGGGGATGGAGATGTACCTTTATTCCTGAAAGTAGGGGACGGAAATGAAGCGGACAAAGC
GGTTTTTGGTCAAATCGCCCGAGAATTTAAAAAACAAGTTGACTTTGACAGTTTAATAGTCGGCGATAGCGCCCTCTATAGCAAAGAGAATTTAAAACTA
ATGAAAGAAATGCGTTGGTTGTCTCGAGTACCATTAAGCATTAAAGAGGCTCAAGAGTTAGTCGATAGCATCTCAGAAAAAGAGTTAACCGATTCAGAAA
TACCGGGTTATTCCTGGCGGGAAACCATCTCTAACTATGGGGGGATAGAACAAAGATGGTTGCTAGTTGAAAGTCAAGCTAGACAAGAATCAGACTTGAA
AAAATTAGAGAAAAAAATCGAGCAGGAAAAGAAAACAGCCCAAGAAAAAATCCGGCAACTATCCCGAAGAGAATTTGAGAATAGAGCGGTGGCGTTGGCG
ATAGTCAAAGGATTATCTGACTCCTTAAAATATCATCAGTTAACGGAGATTAAAGTCAATCTCATTCCGCCTGAGTCTCAGCAGTCAAAACTCAAATCAA
AAGACGATTTACCCTCTCAAAGCTATCAAGTTCAAGCCGAATTAGAGTTGAATTTGGCAGCGATTGAGAGGCTCAAGAAACGAGCAGGACGATTCGTTTT
AGCAACTAACAATTTGGAGAAAAAACGATTAAGCAGTGAGGATATACTCAAAAAATATAAGGGGCAACAAGCTCCAGAAAGAGGATTTTCTTTTCTCAAA
GACCCCTGCTTTTTTGCCCACAGTGTCTTTCTCAAATCTCCCCATAGAATCGAGGTCATGGCCATGCTCATGGGCTTGTGCCTGTTGGTTTATACTATTG
GTCAAAGACAACTTCGTCTGAATTTAAAACAGCAGGAGACGGGACTGAAAAATCAGTTGGGTAAGTTAACTGACCGACCAACATTACGCTGGATATTTCA
GAACTTTCAAGGGATTCATCTCCTACGTATTCAAGACAATCAAAAGATTAGCAACTTAACGGATGAGAGGCGCAACATTTTGAGATTTTTTCCCAAACCT
TGCCAAGAATATTATCTCTTATCTTGACCAGATGGATTGACTTCAAGGGGTGACAAAACAAAGCGAGCAACTGGAACATCTCCCCCTAGATGTTAAGTCT
GATTGACCGGTCATTCTCAACAAGCACTGTTTATTGAGAATGACCGGGGGAACTCTGAAATTTTCGGCTTAGTTGCCGGCAGCTTGCCGCCAACTCACTC
CTCTAGATAAGTATTTTGACTCGCGCCCCTTCCTCTTTTGAGACGTTGTGACACTTAGGGTGCGGAATGTGGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1659 bp552 aa1691827+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNQSTEIEVKNLDHLGLVAGIIDEIGIVEIINEQVSIERGEIVTAGQVVKAIILNGLGFVSRALYLFPQFFEDKATEHLLGEGIEPKHLNDDKIGRVMDK
LYQLNVSVIFLRISLAAVKKFGVATENSHLDSTSLSVEGEYKKEYPTVEILKSGAVGEEIETRQQPIKITYGYSRDRRPDLKQFMIDLIVSGDGDVPLFL
KVGDGNEADKAVFGQIAREFKKQVDFDSLIVGDSALYSKENLKLMKEMRWLSRVPLSIKEAQELVDSISEKELTDSEIPGYSWRETISNYGGIEQRWLLV
ESQARQESDLKKLEKKIEQEKKTAQEKIRQLSRREFENRAVALAIVKGLSDSLKYHQLTEIKVNLIPPESQQSKLKSKDDLPSQSYQVQAELELNLAAIE
RLKKRAGRFVLATNNLEKKRLSSEDILKKYKGQQAPERGFSFLKDPCFFAHSVFLKSPHRIEVMAMLMGLCLLVYTIGQRQLRLNLKQQETGLKNQLGKL
TDRPTLRWIFQNFQGIHLLRIQDNQKISNLTDERRNILRFFPKPCQEYYLLS

 

Blast result :
Comments
ISMae10 is 70% aa similar to ISCwa1.
References
1] ISfinder annotation (2009)
2] Kaneko,T., Nakajima,N., Okamoto,S., Suzuki,I., Tanabe,Y., Tamaoki,M., Nakamura,Y., Kasai,F., Watanabe,A., Kawashima,K., Kishida,Y., Ono,A., Shimizu,Y., Takahashi,C., Minami,C., Fujishiro,T., Kohara,M., Katoh,M., Nakazaki,N., Nakayama,S., Yamada,M., Tabata,S. and Watanabe,M.M. (2007) DNA Res. 14 (6), 247-256