ISBce17
- Family IS607
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_ACLT01000097 | ND | Bacillus cereus | Bacillus thuringiensis sv. kurstaki T03a001 Bacillus cereus ATCC 10876 |
DNA section
IS Length : 1966 bp
Ends
IR Length : 0
IRL : GAGGAGAAAGAAACAGTAAACAAAAACATAGACAAAAGTAGGCATATATA
IRR : CTGCTACTAAAAATATAGACAAATGTATATTCTTAGAGTATTCCTGCTTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GAGAGTTAAGAGAATTAGTG | ATGTAGGTGGAAATAAAAAA | 0 | |
GAGAGTTAAGAGAATTAGTG | ATGTAGGTGGAAATAAAAAA | 0 |
DNA sequence
GAGGAGAAAGAAACAGTAAACAAAAACATAGACAAAAGTAGGCATATATAATAAAAAGTAATTATGAAACAATATAAACCAAAAGAATTTTCAGAAATGC
TTAATGTCTCTGTTAAGACATTGCAAAGGTGGGACAATCAAGGTGTTTTAACTGCTTACCGAAACCAAAAAGGAAGATGATACTATACAGAAGAACAGTA
TAAGGAATATATGGGTATTCAAGAAGAAAATAAAGTAGGCAAAGTAGTTATTTACACAAGAGTATCAAATCCAGGTCAGAAAGATGATTTAGAAAATCAG
GTTGAGTTTTTTAAAACATTCGCAAATGCACGAGGGATGATTGTAGATGAAGTTATCAAAGATATTGGTAGCGGATTAAACTACAAAAGAAAACAGTGGA
ATAACCTGATTGACAGTTGTATGGAAAGAAATATTTCGACTATCATCATTGCACACAAAGATAGATTTGTACGTTTTGGATATGAGTGGTTTGAAAAGTT
TCTTCGTAAAATGGGAGTGGAAATTATGATTGTTAACAATGAAAAACTATCTCCTCAAGAAGAACTTGTGCAGGATTTAATATCTATCATTCATGTATTT
AGCGGTAGAATATATGGGTTGAGAAAATACAAAAAGAAAATGTCGGAGGATGAAGATTTATGAAAAGAGCATATTTAATAGAAATCAAACCGACAACTGA
ACAAGTTAGTAAAATCCGTCAAACTATTGGGGTGTGTCGATATGTATATAACCTGTATATCTCTAAAAATAAAGAGGCATATGAGTCGGATGGGAAATTT
CTTAGTGGCTATGACTTTTCTAAATGGTTAAACAACATTCATACAAAAGAGTGTGACCAGTGGATTAAAGAAGTGTCGAGCAAAGCGGTAAAACAAGCGA
TTATGAATGGAGATAAAGCTTTTAAGCGATTTTTTAAAGGTTTATCTAAGTTTCCACGATATAAAAAAAAGAAGAAGCAAGATGTGAAGTGCTACTTTCC
GAAAAACAACAAAACAGATTGGACAGTAGAAAGACATAGAGTAAAAGTCCCTACAATTGGTTGGATAAGGTTAAAAGAGTATGGATATATTTCAAAAAAT
ACAACTGTAAAAAGTGGTACAGTATATCAAAGAGCAGGAAGATACTATGTGTCTATACTCTGTGAAGTGAAAGAGGTAAAACCAAATTCAATTCTCAATG
CAGTAGGTATAGGAATTGATTTGGGAATTAAAGACTTCGCTGTACGTAGCGATGGAAAAACTCACAAAAATATAAATAAAACAGTACAAGTAAAAAAGAT
AGAAAAACGGTTAAAACGTGAACAACGCTCTTTATCACGCAAATTTGAAAATATAAGAAAGAGAGGTGAACAACCTGTTACTAATAAAAGAGCGAATATA
AACAAAAATATTCTTAGGGTGCAACAGCTACATGCTAGGCTAGCAAATATTCGATTAGCGTATGTAAAGTCTATTGTAAATGATGTGGTGAAAACCAAGC
CAATGTTTATTACAGTAGAAGATTTGAATGTGAAAGGTATGATGAAGAACAAACATCTATCTAAAGCTGTAGCGCAACAATGTTTTTATGCTTTTAAAAC
ATGGTTATCAACGAAATGTAGGGAATATGGAATTGAACTACGGCAAGTGGACAGATTCTATCCATCTTCTAAAATATGTTCATGTTGCGGTCAAAAAAAG
TCGGATTTAAAGCTGTCTGACCGAGTATATACATGTGATTGTGGAAATGTAATGGATAGAGATTTAAATGCATCTATCAACCTTTTACAAGCAAAAAAAT
ATACAATACTAACGTAAATAGATTGTATATATGTACGGTGGGCTACATCGGAATTTACGCCTGTGGAGTGTCACAGCAAACTGTAGTAGCAAGTGATTAG
CGAGGCAGGGCACGTAGAAGCAGGAATACTCTAAGAATATACATTTGTCTATATTTTTAGTAGCAG
TTAATGTCTCTGTTAAGACATTGCAAAGGTGGGACAATCAAGGTGTTTTAACTGCTTACCGAAACCAAAAAGGAAGATGATACTATACAGAAGAACAGTA
TAAGGAATATATGGGTATTCAAGAAGAAAATAAAGTAGGCAAAGTAGTTATTTACACAAGAGTATCAAATCCAGGTCAGAAAGATGATTTAGAAAATCAG
GTTGAGTTTTTTAAAACATTCGCAAATGCACGAGGGATGATTGTAGATGAAGTTATCAAAGATATTGGTAGCGGATTAAACTACAAAAGAAAACAGTGGA
ATAACCTGATTGACAGTTGTATGGAAAGAAATATTTCGACTATCATCATTGCACACAAAGATAGATTTGTACGTTTTGGATATGAGTGGTTTGAAAAGTT
TCTTCGTAAAATGGGAGTGGAAATTATGATTGTTAACAATGAAAAACTATCTCCTCAAGAAGAACTTGTGCAGGATTTAATATCTATCATTCATGTATTT
AGCGGTAGAATATATGGGTTGAGAAAATACAAAAAGAAAATGTCGGAGGATGAAGATTTATGAAAAGAGCATATTTAATAGAAATCAAACCGACAACTGA
ACAAGTTAGTAAAATCCGTCAAACTATTGGGGTGTGTCGATATGTATATAACCTGTATATCTCTAAAAATAAAGAGGCATATGAGTCGGATGGGAAATTT
CTTAGTGGCTATGACTTTTCTAAATGGTTAAACAACATTCATACAAAAGAGTGTGACCAGTGGATTAAAGAAGTGTCGAGCAAAGCGGTAAAACAAGCGA
TTATGAATGGAGATAAAGCTTTTAAGCGATTTTTTAAAGGTTTATCTAAGTTTCCACGATATAAAAAAAAGAAGAAGCAAGATGTGAAGTGCTACTTTCC
GAAAAACAACAAAACAGATTGGACAGTAGAAAGACATAGAGTAAAAGTCCCTACAATTGGTTGGATAAGGTTAAAAGAGTATGGATATATTTCAAAAAAT
ACAACTGTAAAAAGTGGTACAGTATATCAAAGAGCAGGAAGATACTATGTGTCTATACTCTGTGAAGTGAAAGAGGTAAAACCAAATTCAATTCTCAATG
CAGTAGGTATAGGAATTGATTTGGGAATTAAAGACTTCGCTGTACGTAGCGATGGAAAAACTCACAAAAATATAAATAAAACAGTACAAGTAAAAAAGAT
AGAAAAACGGTTAAAACGTGAACAACGCTCTTTATCACGCAAATTTGAAAATATAAGAAAGAGAGGTGAACAACCTGTTACTAATAAAAGAGCGAATATA
AACAAAAATATTCTTAGGGTGCAACAGCTACATGCTAGGCTAGCAAATATTCGATTAGCGTATGTAAAGTCTATTGTAAATGATGTGGTGAAAACCAAGC
CAATGTTTATTACAGTAGAAGATTTGAATGTGAAAGGTATGATGAAGAACAAACATCTATCTAAAGCTGTAGCGCAACAATGTTTTTATGCTTTTAAAAC
ATGGTTATCAACGAAATGTAGGGAATATGGAATTGAACTACGGCAAGTGGACAGATTCTATCCATCTTCTAAAATATGTTCATGTTGCGGTCAAAAAAAG
TCGGATTTAAAGCTGTCTGACCGAGTATATACATGTGATTGTGGAAATGTAATGGATAGAGATTTAAATGCATCTATCAACCTTTTACAAGCAAAAAAAT
ATACAATACTAACGTAAATAGATTGTATATATGTACGGTGGGCTACATCGGAATTTACGCCTGTGGAGTGTCACAGCAAACTGTAGTAGCAAGTGATTAG
CGAGGCAGGGCACGTAGAAGCAGGAATACTCTAAGAATATACATTTGTCTATATTTTTAGTAGCAG
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
453 bp | 150 aa | 211 | 663 | + | No |
Chemistry : Serine
ORF sequence :
MGIQEENKVGKVVIYTRVSNPGQKDDLENQVEFFKTFANARGMIVDEVIKDIGSGLNYKRKQWNNLIDSCMERNISTIIIAHKDRFVRFGYEWFEKFLRK
MGVEIMIVNNEKLSPQEELVQDLISIIHVFSGRIYGLRKYKKKMSEDEDL
MGVEIMIVNNEKLSPQEELVQDLISIIHVFSGRIYGLRKYKKKMSEDEDL
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1086 bp | 361 aa | 732 | 1817 | + | No |
AG : TnpB
ORF sequence :
VCRYVYNLYISKNKEAYESDGKFLSGYDFSKWLNNIHTKECDQWIKEVSSKAVKQAIMNGDKAFKRFFKGLSKFPRYKKKKKQDVKCYFPKNNKTDWTVE
RHRVKVPTIGWIRLKEYGYISKNTTVKSGTVYQRAGRYYVSILCEVKEVKPNSILNAVGIGIDLGIKDFAVRSDGKTHKNINKTVQVKKIEKRLKREQRS
LSRKFENIRKRGEQPVTNKRANINKNILRVQQLHARLANIRLAYVKSIVNDVVKTKPMFITVEDLNVKGMMKNKHLSKAVAQQCFYAFKTWLSTKCREYG
IELRQVDRFYPSSKICSCCGQKKSDLKLSDRVYTCDCGNVMDRDLNASINLLQAKKYTILT
RHRVKVPTIGWIRLKEYGYISKNTTVKSGTVYQRAGRYYVSILCEVKEVKPNSILNAVGIGIDLGIKDFAVRSDGKTHKNINKTVQVKKIEKRLKREQRS
LSRKFENIRKRGEQPVTNKRANINKNILRVQQLHARLANIRLAYVKSIVNDVVKTKPMFITVEDLNVKGMMKNKHLSKAVAQQCFYAFKTWLSTKCREYG
IELRQVDRFYPSSKICSCCGQKKSDLKLSDRVYTCDCGNVMDRDLNASINLLQAKKYTILT
Blast result :
Comments
ISBce17 is 85% (ORFA) aa similar to ISCbt3 and 77% (ORFB) to ISCpe4.
References
1] ISfinder annotation (2009)
2] Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C., Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N., Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C., Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E. (2009) Direct submission GenBank
3] Qiu Ning (2009) Direct submission
2] Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C., Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N., Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C., Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E. (2009) Direct submission GenBank
3] Qiu Ning (2009) Direct submission