ISBce17

  • Family IS607
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_ACLT01000097 ND Bacillus cereus
Bacillus thuringiensis sv. kurstaki T03a001
Bacillus cereus ATCC 10876
DNA section
IS Length : 1966 bp

Ends


IR Length : 0

IRL : GAGGAGAAAGAAACAGTAAACAAAAACATAGACAAAAGTAGGCATATATA
IRR : CTGCTACTAAAAATATAGACAAATGTATATTCTTAGAGTATTCCTGCTTC

Insertion site


Left flankDirect repeatRight flankDR Length
GAGAGTTAAGAGAATTAGTGATGTAGGTGGAAATAAAAAA0
GAGAGTTAAGAGAATTAGTGATGTAGGTGGAAATAAAAAA0

DNA sequence

GAGGAGAAAGAAACAGTAAACAAAAACATAGACAAAAGTAGGCATATATAATAAAAAGTAATTATGAAACAATATAAACCAAAAGAATTTTCAGAAATGC
TTAATGTCTCTGTTAAGACATTGCAAAGGTGGGACAATCAAGGTGTTTTAACTGCTTACCGAAACCAAAAAGGAAGATGATACTATACAGAAGAACAGTA
TAAGGAATATATGGGTATTCAAGAAGAAAATAAAGTAGGCAAAGTAGTTATTTACACAAGAGTATCAAATCCAGGTCAGAAAGATGATTTAGAAAATCAG
GTTGAGTTTTTTAAAACATTCGCAAATGCACGAGGGATGATTGTAGATGAAGTTATCAAAGATATTGGTAGCGGATTAAACTACAAAAGAAAACAGTGGA
ATAACCTGATTGACAGTTGTATGGAAAGAAATATTTCGACTATCATCATTGCACACAAAGATAGATTTGTACGTTTTGGATATGAGTGGTTTGAAAAGTT
TCTTCGTAAAATGGGAGTGGAAATTATGATTGTTAACAATGAAAAACTATCTCCTCAAGAAGAACTTGTGCAGGATTTAATATCTATCATTCATGTATTT
AGCGGTAGAATATATGGGTTGAGAAAATACAAAAAGAAAATGTCGGAGGATGAAGATTTATGAAAAGAGCATATTTAATAGAAATCAAACCGACAACTGA
ACAAGTTAGTAAAATCCGTCAAACTATTGGGGTGTGTCGATATGTATATAACCTGTATATCTCTAAAAATAAAGAGGCATATGAGTCGGATGGGAAATTT
CTTAGTGGCTATGACTTTTCTAAATGGTTAAACAACATTCATACAAAAGAGTGTGACCAGTGGATTAAAGAAGTGTCGAGCAAAGCGGTAAAACAAGCGA
TTATGAATGGAGATAAAGCTTTTAAGCGATTTTTTAAAGGTTTATCTAAGTTTCCACGATATAAAAAAAAGAAGAAGCAAGATGTGAAGTGCTACTTTCC
GAAAAACAACAAAACAGATTGGACAGTAGAAAGACATAGAGTAAAAGTCCCTACAATTGGTTGGATAAGGTTAAAAGAGTATGGATATATTTCAAAAAAT
ACAACTGTAAAAAGTGGTACAGTATATCAAAGAGCAGGAAGATACTATGTGTCTATACTCTGTGAAGTGAAAGAGGTAAAACCAAATTCAATTCTCAATG
CAGTAGGTATAGGAATTGATTTGGGAATTAAAGACTTCGCTGTACGTAGCGATGGAAAAACTCACAAAAATATAAATAAAACAGTACAAGTAAAAAAGAT
AGAAAAACGGTTAAAACGTGAACAACGCTCTTTATCACGCAAATTTGAAAATATAAGAAAGAGAGGTGAACAACCTGTTACTAATAAAAGAGCGAATATA
AACAAAAATATTCTTAGGGTGCAACAGCTACATGCTAGGCTAGCAAATATTCGATTAGCGTATGTAAAGTCTATTGTAAATGATGTGGTGAAAACCAAGC
CAATGTTTATTACAGTAGAAGATTTGAATGTGAAAGGTATGATGAAGAACAAACATCTATCTAAAGCTGTAGCGCAACAATGTTTTTATGCTTTTAAAAC
ATGGTTATCAACGAAATGTAGGGAATATGGAATTGAACTACGGCAAGTGGACAGATTCTATCCATCTTCTAAAATATGTTCATGTTGCGGTCAAAAAAAG
TCGGATTTAAAGCTGTCTGACCGAGTATATACATGTGATTGTGGAAATGTAATGGATAGAGATTTAAATGCATCTATCAACCTTTTACAAGCAAAAAAAT
ATACAATACTAACGTAAATAGATTGTATATATGTACGGTGGGCTACATCGGAATTTACGCCTGTGGAGTGTCACAGCAAACTGTAGTAGCAAGTGATTAG
CGAGGCAGGGCACGTAGAAGCAGGAATACTCTAAGAATATACATTTGTCTATATTTTTAGTAGCAG
Protein section
ORF number : 2

 

ORF 1
LengthBeginEndStrandFusion ORF
453 bp150 aa211663+No
ORF function : Transposase
Chemistry : Serine

ORF sequence :

MGIQEENKVGKVVIYTRVSNPGQKDDLENQVEFFKTFANARGMIVDEVIKDIGSGLNYKRKQWNNLIDSCMERNISTIIIAHKDRFVRFGYEWFEKFLRK
MGVEIMIVNNEKLSPQEELVQDLISIIHVFSGRIYGLRKYKKKMSEDEDL

 

Blast result :
ORF 2
LengthBeginEndStrandFusion ORF
1086 bp361 aa7321817+No
ORF function : Accessory Gene
AG : TnpB

ORF sequence :

VCRYVYNLYISKNKEAYESDGKFLSGYDFSKWLNNIHTKECDQWIKEVSSKAVKQAIMNGDKAFKRFFKGLSKFPRYKKKKKQDVKCYFPKNNKTDWTVE
RHRVKVPTIGWIRLKEYGYISKNTTVKSGTVYQRAGRYYVSILCEVKEVKPNSILNAVGIGIDLGIKDFAVRSDGKTHKNINKTVQVKKIEKRLKREQRS
LSRKFENIRKRGEQPVTNKRANINKNILRVQQLHARLANIRLAYVKSIVNDVVKTKPMFITVEDLNVKGMMKNKHLSKAVAQQCFYAFKTWLSTKCREYG
IELRQVDRFYPSSKICSCCGQKKSDLKLSDRVYTCDCGNVMDRDLNASINLLQAKKYTILT

 

Blast result :
Comments
ISBce17 is 85% (ORFA) aa similar to ISCbt3 and 77% (ORFB) to ISCpe4.
References
1] ISfinder annotation (2009)
2] Read,T.D., Akmal,A., Bishop-Lilly,K., Chen,P.E., Cook,C., Kiley,M.P., Lentz,S., Mateczun,A., Nagarajan,N., Nolan,N., Osborne,B.I., Pop,M., Sozhamannan,S., Stewart,A.C., Sulakvelidze,A., Thomason,B., Willner,K. and Zwick,M.E. (2009) Direct submission GenBank
3] Qiu Ning (2009) Direct submission