ISBth166

  • Family IS110
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
DQ242517 ND Bacillus thuringiensis
Bacillus thuringiensis serovar tenebrionis plasmid pBMB165
DNA section
IS Length : 1729 bp

Ends


Left end : CGTATATTAATATTTAAGTCCTATTTCAGGCTTAGATTTTCTCTGTAATAAGAATCCTGTTATAAATAAAATACTTGGACGTTTCAAGATATTTCTAGAT
Right end : AATTACATATATTACTGGTTTAGTTCGTGATGTCTTTTTAAGCAATAGGTCTTTGATAACTAAGATTCTTTTGTTTTTCAGTTGACATACTACCGCAGGT

Insertion site


Left flankDirect repeatRight flankDR Length
ATTCCTCCCTCTATATTATT0

DNA sequence

CGTATATTAATATTTAAGTCCTATTTCAGGCTTAGATTTTCTCTGTAATAAGAATCCTGTTATAAATAAAATACTTGGACGTTTCAAGATATTTCTAGAT
AATGATCTTAGGATCATTTGGGACAATTCTTATTCCTCCTGTGGACTTACCACATAACTTAGAGTGTTTCTCAGTGAACGTGCGGGACTCCCTACTCGCA
GGCTGAGCAGCCTGACCCTCGAACCTAGATGTTAGTAGCTCTAGGGCGGCTTTCGATTCAGGACAAGCTCTCATACACGAGGTTGTTGGTCGGCGTACAC
ACTAGAGATATCTCGAGACGTCCAAGGAATGATTCTAAATAGAAGGGAGGTCTCTTACATGAGATTATTTGTTGGTTTAGATGTAAGTTCGTTTGATATA
AAAGCTTGTATTTTAAATGGTGAAGGGAAAAAGCTAGATTCCTTTTCGGTCAACAACGATTTGCCAGGTGCCACAGCGCTCAAAAAGCGAGTGTTAAAGT
GTATAGCCAACCAAGAAATTGAAACTTTTAAAATCGGCCTAGAATCCACATCTGTTTATAGTTTTCATCCATCTATGTTTCTTCATTATGATGAAGACTT
ACAACGCTTTGGGGCAAAGGTATTTCTGATGAATCCAAAACAAATTGCAAATTTCAAGAAAAGCTATTCTGACATGGATAAAACAGATGCGATTGATGCC
TTTGTCATCGCTGATTACTTACGATTCGGACGGAATCAAATGTCCATCGTAAAAGAAAGTCAGTATGTGGCACTCCAGCAATTAACAAGATCTCGTTATC
AGCTCGTTAGAATGTTAACAAAGGAAAAACAACATTTTCTCCAACACTTAAGTTATAAATGTAATACGTTCTCACAAGAAGTGGATTCTTCTATCTTTGG
CAACGCCATGATGGAACTGTTTCTTGAGAAATTCAGTCTAGAAGAGCTAGCTGACATGCCTTTAGAGGAACTCGCTGAGTTCCTACAAACGAAAGGGAAA
AACCGATTCGGTGACCCGAAATGTGTCGCATCAACCATTCAAAGGGCTGTTCGCTCTTCCTATCGTTTGGATAAGGTCGTAGAAGACTCAATCGATGTTC
TTTTAGGAACGTCAATTGCGGTTATTCGTACCTATCAACAGCAAATCAAAGAAATAGAAAAATCCATTAAGCGAATCATGGCTGGATTAACGCAAACACT
CGAATCCATTCCTGGAATTGGACCTGTATTCGCCGCTGGTATTATCGCTGAGATTGGTCAAATCGAAAGATTTGATGATGAAACCAAGGTAGCAAAATAT
GCCGGATTATATTGGCGTACGCACCAATCTGGTCGATTCACCGCAGAAAACACTTCATTATCCCGTAATGGAAATCATTACTTGCGGTATTACTTAGTTG
AAGCCGCCAACTCTGTAAGAAGGCATGTATCTGATTATCAAGAATATTACGTGAAAAAATATAATGAAGTACCAAAACATCAACACAAACGTGCACTCGT
TCTAACCGCAAGAAAACTTGTGCGATTGGTGGATGCGCTACTACGTAGTCACCAACTTTTTACGCCAGAAAGGTGCGTGAAAGTGTGACATAAAACTTGT
CATCGCTACCTTCTAATTAATTTCCAGTAAATTACATATATTACTGGTTTAGTTCGTGATGTCTTTTTAAGCAATAGGTCTTTGATAACTAAGATTCTTT
TGTTTTTCAGTTGACATACTACCGCAGGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1230 bp409 aa3591588+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MRLFVGLDVSSFDIKACILNGEGKKLDSFSVNNDLPGATALKKRVLKCIANQEIETFKIGLESTSVYSFHPSMFLHYDEDLQRFGAKVFLMNPKQIANFK
KSYSDMDKTDAIDAFVIADYLRFGRNQMSIVKESQYVALQQLTRSRYQLVRMLTKEKQHFLQHLSYKCNTFSQEVDSSIFGNAMMELFLEKFSLEELADM
PLEELAEFLQTKGKNRFGDPKCVASTIQRAVRSSYRLDKVVEDSIDVLLGTSIAVIRTYQQQIKEIEKSIKRIMAGLTQTLESIPGIGPVFAAGIIAEIG
QIERFDDETKVAKYAGLYWRTHQSGRFTAENTSLSRNGNHYLRYYLVEAANSVRRHVSDYQEYYVKKYNEVPKHQHKRALVLTARKLVRLVDALLRSHQL
FTPERCVKV

 

Blast result :
Comments
ISBth166 is 65% aa similar to ISDha12.
References
1] ISfinder annotation (2009)
2] Huang,J., Guo,S., Mahillon,J., Van der Auwera,G.A., Wang,L., Han,D., Yu,Z. and Sun,M. (2006) BMC Genomics 7, 270