ISBth166
- Family IS110
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
DQ242517 | ND | Bacillus thuringiensis | Bacillus thuringiensis serovar tenebrionis plasmid pBMB165 |
DNA section
IS Length : 1729 bp
Ends
Left end : CGTATATTAATATTTAAGTCCTATTTCAGGCTTAGATTTTCTCTGTAATAAGAATCCTGTTATAAATAAAATACTTGGACGTTTCAAGATATTTCTAGAT
Right end : AATTACATATATTACTGGTTTAGTTCGTGATGTCTTTTTAAGCAATAGGTCTTTGATAACTAAGATTCTTTTGTTTTTCAGTTGACATACTACCGCAGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATTCCTCCCT | CTATATTATT | 0 |
DNA sequence
CGTATATTAATATTTAAGTCCTATTTCAGGCTTAGATTTTCTCTGTAATAAGAATCCTGTTATAAATAAAATACTTGGACGTTTCAAGATATTTCTAGAT
AATGATCTTAGGATCATTTGGGACAATTCTTATTCCTCCTGTGGACTTACCACATAACTTAGAGTGTTTCTCAGTGAACGTGCGGGACTCCCTACTCGCA
GGCTGAGCAGCCTGACCCTCGAACCTAGATGTTAGTAGCTCTAGGGCGGCTTTCGATTCAGGACAAGCTCTCATACACGAGGTTGTTGGTCGGCGTACAC
ACTAGAGATATCTCGAGACGTCCAAGGAATGATTCTAAATAGAAGGGAGGTCTCTTACATGAGATTATTTGTTGGTTTAGATGTAAGTTCGTTTGATATA
AAAGCTTGTATTTTAAATGGTGAAGGGAAAAAGCTAGATTCCTTTTCGGTCAACAACGATTTGCCAGGTGCCACAGCGCTCAAAAAGCGAGTGTTAAAGT
GTATAGCCAACCAAGAAATTGAAACTTTTAAAATCGGCCTAGAATCCACATCTGTTTATAGTTTTCATCCATCTATGTTTCTTCATTATGATGAAGACTT
ACAACGCTTTGGGGCAAAGGTATTTCTGATGAATCCAAAACAAATTGCAAATTTCAAGAAAAGCTATTCTGACATGGATAAAACAGATGCGATTGATGCC
TTTGTCATCGCTGATTACTTACGATTCGGACGGAATCAAATGTCCATCGTAAAAGAAAGTCAGTATGTGGCACTCCAGCAATTAACAAGATCTCGTTATC
AGCTCGTTAGAATGTTAACAAAGGAAAAACAACATTTTCTCCAACACTTAAGTTATAAATGTAATACGTTCTCACAAGAAGTGGATTCTTCTATCTTTGG
CAACGCCATGATGGAACTGTTTCTTGAGAAATTCAGTCTAGAAGAGCTAGCTGACATGCCTTTAGAGGAACTCGCTGAGTTCCTACAAACGAAAGGGAAA
AACCGATTCGGTGACCCGAAATGTGTCGCATCAACCATTCAAAGGGCTGTTCGCTCTTCCTATCGTTTGGATAAGGTCGTAGAAGACTCAATCGATGTTC
TTTTAGGAACGTCAATTGCGGTTATTCGTACCTATCAACAGCAAATCAAAGAAATAGAAAAATCCATTAAGCGAATCATGGCTGGATTAACGCAAACACT
CGAATCCATTCCTGGAATTGGACCTGTATTCGCCGCTGGTATTATCGCTGAGATTGGTCAAATCGAAAGATTTGATGATGAAACCAAGGTAGCAAAATAT
GCCGGATTATATTGGCGTACGCACCAATCTGGTCGATTCACCGCAGAAAACACTTCATTATCCCGTAATGGAAATCATTACTTGCGGTATTACTTAGTTG
AAGCCGCCAACTCTGTAAGAAGGCATGTATCTGATTATCAAGAATATTACGTGAAAAAATATAATGAAGTACCAAAACATCAACACAAACGTGCACTCGT
TCTAACCGCAAGAAAACTTGTGCGATTGGTGGATGCGCTACTACGTAGTCACCAACTTTTTACGCCAGAAAGGTGCGTGAAAGTGTGACATAAAACTTGT
CATCGCTACCTTCTAATTAATTTCCAGTAAATTACATATATTACTGGTTTAGTTCGTGATGTCTTTTTAAGCAATAGGTCTTTGATAACTAAGATTCTTT
TGTTTTTCAGTTGACATACTACCGCAGGT
AATGATCTTAGGATCATTTGGGACAATTCTTATTCCTCCTGTGGACTTACCACATAACTTAGAGTGTTTCTCAGTGAACGTGCGGGACTCCCTACTCGCA
GGCTGAGCAGCCTGACCCTCGAACCTAGATGTTAGTAGCTCTAGGGCGGCTTTCGATTCAGGACAAGCTCTCATACACGAGGTTGTTGGTCGGCGTACAC
ACTAGAGATATCTCGAGACGTCCAAGGAATGATTCTAAATAGAAGGGAGGTCTCTTACATGAGATTATTTGTTGGTTTAGATGTAAGTTCGTTTGATATA
AAAGCTTGTATTTTAAATGGTGAAGGGAAAAAGCTAGATTCCTTTTCGGTCAACAACGATTTGCCAGGTGCCACAGCGCTCAAAAAGCGAGTGTTAAAGT
GTATAGCCAACCAAGAAATTGAAACTTTTAAAATCGGCCTAGAATCCACATCTGTTTATAGTTTTCATCCATCTATGTTTCTTCATTATGATGAAGACTT
ACAACGCTTTGGGGCAAAGGTATTTCTGATGAATCCAAAACAAATTGCAAATTTCAAGAAAAGCTATTCTGACATGGATAAAACAGATGCGATTGATGCC
TTTGTCATCGCTGATTACTTACGATTCGGACGGAATCAAATGTCCATCGTAAAAGAAAGTCAGTATGTGGCACTCCAGCAATTAACAAGATCTCGTTATC
AGCTCGTTAGAATGTTAACAAAGGAAAAACAACATTTTCTCCAACACTTAAGTTATAAATGTAATACGTTCTCACAAGAAGTGGATTCTTCTATCTTTGG
CAACGCCATGATGGAACTGTTTCTTGAGAAATTCAGTCTAGAAGAGCTAGCTGACATGCCTTTAGAGGAACTCGCTGAGTTCCTACAAACGAAAGGGAAA
AACCGATTCGGTGACCCGAAATGTGTCGCATCAACCATTCAAAGGGCTGTTCGCTCTTCCTATCGTTTGGATAAGGTCGTAGAAGACTCAATCGATGTTC
TTTTAGGAACGTCAATTGCGGTTATTCGTACCTATCAACAGCAAATCAAAGAAATAGAAAAATCCATTAAGCGAATCATGGCTGGATTAACGCAAACACT
CGAATCCATTCCTGGAATTGGACCTGTATTCGCCGCTGGTATTATCGCTGAGATTGGTCAAATCGAAAGATTTGATGATGAAACCAAGGTAGCAAAATAT
GCCGGATTATATTGGCGTACGCACCAATCTGGTCGATTCACCGCAGAAAACACTTCATTATCCCGTAATGGAAATCATTACTTGCGGTATTACTTAGTTG
AAGCCGCCAACTCTGTAAGAAGGCATGTATCTGATTATCAAGAATATTACGTGAAAAAATATAATGAAGTACCAAAACATCAACACAAACGTGCACTCGT
TCTAACCGCAAGAAAACTTGTGCGATTGGTGGATGCGCTACTACGTAGTCACCAACTTTTTACGCCAGAAAGGTGCGTGAAAGTGTGACATAAAACTTGT
CATCGCTACCTTCTAATTAATTTCCAGTAAATTACATATATTACTGGTTTAGTTCGTGATGTCTTTTTAAGCAATAGGTCTTTGATAACTAAGATTCTTT
TGTTTTTCAGTTGACATACTACCGCAGGT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1230 bp | 409 aa | 359 | 1588 | + | No |
Chemistry : DEDD
ORF sequence :
MRLFVGLDVSSFDIKACILNGEGKKLDSFSVNNDLPGATALKKRVLKCIANQEIETFKIGLESTSVYSFHPSMFLHYDEDLQRFGAKVFLMNPKQIANFK
KSYSDMDKTDAIDAFVIADYLRFGRNQMSIVKESQYVALQQLTRSRYQLVRMLTKEKQHFLQHLSYKCNTFSQEVDSSIFGNAMMELFLEKFSLEELADM
PLEELAEFLQTKGKNRFGDPKCVASTIQRAVRSSYRLDKVVEDSIDVLLGTSIAVIRTYQQQIKEIEKSIKRIMAGLTQTLESIPGIGPVFAAGIIAEIG
QIERFDDETKVAKYAGLYWRTHQSGRFTAENTSLSRNGNHYLRYYLVEAANSVRRHVSDYQEYYVKKYNEVPKHQHKRALVLTARKLVRLVDALLRSHQL
FTPERCVKV
KSYSDMDKTDAIDAFVIADYLRFGRNQMSIVKESQYVALQQLTRSRYQLVRMLTKEKQHFLQHLSYKCNTFSQEVDSSIFGNAMMELFLEKFSLEELADM
PLEELAEFLQTKGKNRFGDPKCVASTIQRAVRSSYRLDKVVEDSIDVLLGTSIAVIRTYQQQIKEIEKSIKRIMAGLTQTLESIPGIGPVFAAGIIAEIG
QIERFDDETKVAKYAGLYWRTHQSGRFTAENTSLSRNGNHYLRYYLVEAANSVRRHVSDYQEYYVKKYNEVPKHQHKRALVLTARKLVRLVDALLRSHQL
FTPERCVKV
Blast result :
Comments
ISBth166 is 65% aa similar to ISDha12.
References
1] ISfinder annotation (2009)
2] Huang,J., Guo,S., Mahillon,J., Van der Auwera,G.A., Wang,L., Han,D., Yu,Z. and Sun,M. (2006) BMC Genomics 7, 270
2] Huang,J., Guo,S., Mahillon,J., Van der Auwera,G.A., Wang,L., Han,D., Yu,Z. and Sun,M. (2006) BMC Genomics 7, 270