ISfinder Mirror Site

ISVer2

Family ISAs1
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NZ_ABOX01000007	ND	Bacterium Ellin514	Bacterium Ellin514

DNA section

IS Length : 1231 bp

Ends

IR Length : 19/20

IRL : CAGGGCAGACGCATCAAAATTTTTTTGAAGAAAAGTATGTACTTTGTAAA
IRR : CAGGGCAAACGCATCAAAATGATAAAAGGCGTAGGAGGTAATCATGGTCC

Insertion site

Left flank	Direct repeat	Right flank	DR Length
CTTCAGAAATCGTA	CAGAAAATCC	GAGGTAGAATTGTGT	10

DNA sequence

CAGGGCAGACGCATCAAAATTTTTTTGAAGAAAAGTATGTACTTTGTAAATACAATGCGTACATGAGATGGGATGCAAAAGCATCACCGTCAAAACTTGA
TCGAACATTTCAAAGAGATAAGGGACCCGCGAGTCAAAGGCCGGTGCGACCACGAACTGGTGGACGTGCTGATGATTGGTTTGTGCTGCCTGCTGTGCGG
CGGGGAAACCTTCAACGACATGGAGGACTTTGGCAAAGCCAAACGCAAATGGTTCAAGACGTTTCTGCGTTTGCGCCATGGGATACCCAAACACGACACG
TTCAACCGAGTGTTTGCGGCGCTCAAGCCGGAAGCCTTTCTGGACTGTTTCATGCGCTGGACGCAATCGGTGCGCGCGACGGTGGCTGATGAAATCGTGG
CGTTGGATGGCAAGGCCCTGCGTCGGGCGCTGGAGCAAGGACAATCCCCGCGGGTGATTGTCAGCGCCTGGGCGGCGGGCAACTCGCTGGTGCTGGGCCA
AATCCAGGTGCCTGACAAGACCAATGAAATCACCGCTGTGCCGCAACTGTTGCGAGTGTTGGAGTTGAGCGGATGCATTGTCACCCTCGATGCCATGGGG
TGCCAAAAGGAGATAGCCAGGGAGATTGTGGAAGCCGACGCCAACTACGTGCTGGCGCTCAAAGGCAACCAGGGCCAGTGCCATCAGGAAATCAAAGCCT
ATCTGGAGGACGCCGTGGCGCGGCACGACCAGGAGCGGCCTGTGGAAAAGAATGCCGTGGCGCTGGCTTACAAGGAAACCACCGAAAAAGATCACGGACG
CCTGGAAACACGACGCTACTGGCAAAGCGGCGATGTCAGCTGGCTTGCTGATCGCCAGCAATGGGCAGGACTGCGCAGCGTGGGCGTGGTGGAGAGCGTG
CGGCAGGTGGGCCAGCAAGCGCCCACGGTGGAACGGCGCTATTATTTGAGCAGCTTGAACGTGGACGTTGAAAAGTTTGCTCGTGCCGTGCGCGGACACT
GGAGTGTGGAAAACTCCCTGCACTGGGTGCTGGACGTGCAATGCGGCGAGGACCGCAACCGGGCCCGCTCTGGCCACGCCGCTGAAAACCTCGCCACCTT
GCGTCGACTGGCTTTAAACCTCTTAAAACGAGAATCCACCAAAAAACGCGGCATCAAAGGCAAACAACTCAATGCTTCCTGGGACCATGATTACCTCCTA
CGCCTTTTATCATTTTGATGCGTTTGCCCTG

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1146 bp	381 aa	73	1218	+	No

ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MQKHHRQNLIEHFKEIRDPRVKGRCDHELVDVLMIGLCCLLCGGETFNDMEDFGKAKRKWFKTFLRLRHGIPKHDTFNRVFAALKPEAFLDCFMRWTQSV
RATVADEIVALDGKALRRALEQGQSPRVIVSAWAAGNSLVLGQIQVPDKTNEITAVPQLLRVLELSGCIVTLDAMGCQKEIAREIVEADANYVLALKGNQ
GQCHQEIKAYLEDAVARHDQERPVEKNAVALAYKETTEKDHGRLETRRYWQSGDVSWLADRQQWAGLRSVGVVESVRQVGQQAPTVERRYYLSSLNVDVE
KFARAVRGHWSVENSLHWVLDVQCGEDRNRARSGHAAENLATLRRLALNLLKRESTKKRGIKGKQLNASWDHDYLLRLLSF

Blast result :

Comments

ISVer2 is 66% aa similar to ISAcma2.

References

1] ISfinder annotation (2009)
2] Copeland,A., Lucas,S., Lapidus,A., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Goodwin,L., Pitluck,S., Larimer,F., Land,M.L., Hauser,L., Smidt,H. and Richardson,P. (2008) Direct submission GenBank.