ISUnCu11
- Family ISAs1
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AB294750 | ND | uncultured bacterium | uncultured bacterium |
DNA section
IS Length : 1223 bp
Ends
IR Length : 15
IRL : TAGGGCAAACGCATATTCATTTTTCAAGATAGCCAATAGCGCGTATCCTC
IRR : TAGGGCAAACGCATACTAACCTGAAAGCACCTTGACAAGATAGTCATTGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AACGGTTCCAATCT | GGCGTCCACG | GCCGCAGCGTGCA | 10 |
DNA sequence
TAGGGCAAACGCATATTCATTTTTCAAGATAGCCAATAGCGCGTATCCTCTGCAAAAATGGGGAGATACGCATGTCTGACACAGTAGTAGCTACAATTGA
AGTCCACTTCAGTAAGGTAGAAGACCCGCGCTGCACTTATCTGAATGACCATCCACTTATCAACATTATCACGATTGCCTTGTGCGCTGTCATCGCTGGT
GCAGAAAGCTGGAATGACATCGCCAACTTCGGTCAACAGAAAACCGATTGGTTGAGCAAGTTTCTAGATTTAAGAAATGGCATTCCATCACATGACACCT
TCAATCGTGTCTTTGCTCGACTAGACCCAGAGCAATTTCGCCAAGGCTTTCTTTCCTGGGTGCAAGCTGTGTTTGAAGTGAGTAATGGCCAGGTCATTGC
GATTGATGGCAAACAACTGCGGCGGTCACACGACAAAAGCAACCGGCAAAAAGCGATTCATATGGTCAGCGCCTGGGCCACAGCCAATCATCTGGTGTTG
GGTCAGGTAAAAGTAAAGGGCAAATCCAACGAGATTACGGCTATTCCCGTACTATTGGCCTTGCTGGACTTGACGGGTTGCATTGTCACCATTGATGCGA
TTGGCACGCAGACAGAAATTGCTCAGCAAATTGTTAACCAAGGCGGCGACTACCTATTGTCTGTCAAGCAAAACCAGAGGCAACTGTATGAAGACATCCA
ACTCTTCTTCAAACTGGCGCAAGAGAACGAATTTGCCAGGGTGAATCACACCTATCATCGCACGACGAATAGCGGTCATGGACGGATTGAAATCCGGCAT
TGCTGGGCGATTGCGGGCGCTGAGAGCCTGGATTTCTTACGCGGTGTAGCAAACTGGGCCAAGCTACAGACGCTTGTCATGATGCAATTCGAACGACATA
TCGGCCGTAAGATTACCCGGCAGACACACTATTTCATTACCAGCGTTACCAATGACGCTCAAGTGCTCCTGGCAGCTAAACGCAGTCATTGGGGAATTGA
AAACGAACTGCATTGGGTGCTTGACGTTGCCTTTCGTGAGGACGATTGTCGTGTTCGCCAAGGCAATGCACCACAAAATCTGGCCATCCTACGTCACATG
GCCCTCAATCTGCTCAAGCAAGAGAAGACAGCTAAAGGCGGCATCAAGGCCAAGCGTTTGCAGGCTGCTTGGAACAATGACTATCTTGTCAAGGTGCTTT
CAGGTTAGTATGCGTTTGCCCTA
AGTCCACTTCAGTAAGGTAGAAGACCCGCGCTGCACTTATCTGAATGACCATCCACTTATCAACATTATCACGATTGCCTTGTGCGCTGTCATCGCTGGT
GCAGAAAGCTGGAATGACATCGCCAACTTCGGTCAACAGAAAACCGATTGGTTGAGCAAGTTTCTAGATTTAAGAAATGGCATTCCATCACATGACACCT
TCAATCGTGTCTTTGCTCGACTAGACCCAGAGCAATTTCGCCAAGGCTTTCTTTCCTGGGTGCAAGCTGTGTTTGAAGTGAGTAATGGCCAGGTCATTGC
GATTGATGGCAAACAACTGCGGCGGTCACACGACAAAAGCAACCGGCAAAAAGCGATTCATATGGTCAGCGCCTGGGCCACAGCCAATCATCTGGTGTTG
GGTCAGGTAAAAGTAAAGGGCAAATCCAACGAGATTACGGCTATTCCCGTACTATTGGCCTTGCTGGACTTGACGGGTTGCATTGTCACCATTGATGCGA
TTGGCACGCAGACAGAAATTGCTCAGCAAATTGTTAACCAAGGCGGCGACTACCTATTGTCTGTCAAGCAAAACCAGAGGCAACTGTATGAAGACATCCA
ACTCTTCTTCAAACTGGCGCAAGAGAACGAATTTGCCAGGGTGAATCACACCTATCATCGCACGACGAATAGCGGTCATGGACGGATTGAAATCCGGCAT
TGCTGGGCGATTGCGGGCGCTGAGAGCCTGGATTTCTTACGCGGTGTAGCAAACTGGGCCAAGCTACAGACGCTTGTCATGATGCAATTCGAACGACATA
TCGGCCGTAAGATTACCCGGCAGACACACTATTTCATTACCAGCGTTACCAATGACGCTCAAGTGCTCCTGGCAGCTAAACGCAGTCATTGGGGAATTGA
AAACGAACTGCATTGGGTGCTTGACGTTGCCTTTCGTGAGGACGATTGTCGTGTTCGCCAAGGCAATGCACCACAAAATCTGGCCATCCTACGTCACATG
GCCCTCAATCTGCTCAAGCAAGAGAAGACAGCTAAAGGCGGCATCAAGGCCAAGCGTTTGCAGGCTGCTTGGAACAATGACTATCTTGTCAAGGTGCTTT
CAGGTTAGTATGCGTTTGCCCTA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1137 bp | 378 aa | 72 | 1208 | + | No |
Chemistry : Unknow
ORF sequence :
MSDTVVATIEVHFSKVEDPRCTYLNDHPLINIITIALCAVIAGAESWNDIANFGQQKTDWLSKFLDLRNGIPSHDTFNRVFARLDPEQFRQGFLSWVQAV
FEVSNGQVIAIDGKQLRRSHDKSNRQKAIHMVSAWATANHLVLGQVKVKGKSNEITAIPVLLALLDLTGCIVTIDAIGTQTEIAQQIVNQGGDYLLSVKQ
NQRQLYEDIQLFFKLAQENEFARVNHTYHRTTNSGHGRIEIRHCWAIAGAESLDFLRGVANWAKLQTLVMMQFERHIGRKITRQTHYFITSVTNDAQVLL
AAKRSHWGIENELHWVLDVAFREDDCRVRQGNAPQNLAILRHMALNLLKQEKTAKGGIKAKRLQAAWNNDYLVKVLSG
FEVSNGQVIAIDGKQLRRSHDKSNRQKAIHMVSAWATANHLVLGQVKVKGKSNEITAIPVLLALLDLTGCIVTIDAIGTQTEIAQQIVNQGGDYLLSVKQ
NQRQLYEDIQLFFKLAQENEFARVNHTYHRTTNSGHGRIEIRHCWAIAGAESLDFLRGVANWAKLQTLVMMQFERHIGRKITRQTHYFITSVTNDAQVLL
AAKRSHWGIENELHWVLDVAFREDDCRVRQGNAPQNLAILRHMALNLLKQEKTAKGGIKAKRLQAAWNNDYLVKVLSG
Blast result :
Comments
ISUnCu11 is 68% aa similar to ISAcma2.
References
1] Isfinder annotation (2009)
2] Mori,T., Suenaga,H. and Miyazaki,K. (2008) Biosci. Biotechnol. Biochem. 72 (6), 1611-1614
2] Mori,T., Suenaga,H. and Miyazaki,K. (2008) Biosci. Biotechnol. Biochem. 72 (6), 1611-1614