ISGdi3

  • Family IS5
  • Group IS1031
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Gluconacetobacter diazotrophicus
Gluconacetobacter diazotrophicus PAl 5
DNA section
IS Length : 912 bp

Ends


IR Length : 21/29

IRL : GTCTGACTTAAAATGAGTTGAGTGATTTCAGCGGGTTATGATTCATGGGT
IRR : GCCTGAATCAGAAAGCGGTTTGATTGATTTTCCGTAGAACTCTGCGGATA

Insertion site


Left flankDirect repeatRight flankDR Length
AAATTGAATTCAAGCTGACTTCTGAGAGAGATGGGGAA0

DNA sequence

GTCTGACTTAAAATGAGTTGAGTGATTTCAGCGGGTTATGATTCATGGGTTTGCGACGACCTGATGAGATCAAGATGGCCTGGACTGAAATCACCCGCGC
GCAGTATCGCCGGGACGACCTTGAGTATGCAAGTGACCTGCGCGATGCGGAATGGGCGCTGATTGCGCCGTTGATGCCCGAGAGGAAACGTCTGGGGAGA
CCGCGCCGCACCGATTTGCGCCGCGTCATGGAAGCGATCCTCTATATCGTCACGACCGGCTGCCAATGGCGGCAACTGCCCCGGCACTTTCCTGCCTTCA
CGACCGTGCAAGGCTATTTCTATCGGTGGATACGCGAGGGACGGTGGGAGGCCATGAACCATATTCTCGTGATCCTGTCGCGTGAACAAGATGGACGGGA
CGCCACGCCTTCGGTGGGCATTATCGACAGCCAGTCGGTGAAAACCGCAGAAAATAGCGGCCCGCGCGGCTATGACGCGGGCAAGAAGATCAAGGGACGC
AAGCGGCATATCGCCACCGACACGCTGGGTCATGTCGTGGCGGCTGTCGTGCATCCCGCCGACGTTCAGGATCGTGACGGCGCGCCGCTGGTAGCGACCA
GGATACGCTCATTGTTCCCCTGGCTTCGCCATCTGATCGGCGACGGGGGATATGCCGGAGAGAAGTTGCGTGGTGCGCTGGCTGAACTCGGCCGATGGAC
GATCGAGATCGTCAAACGCAGCGATCGGGCCCAAGGCTTCGTCGTCCTGCCCAAACGCTGGATCGTGGAGCGTAGCTTTGCATGGCTCGGTCGCTGCCGC
CGCCTCACGAGGGATGTCGAGGCAACAATCTCCTCATCCCACGCGTGGCTGATGATCGCTCATATCCGCAGAGTTCTACGGAAAATCAATCAAACCGCTT
TCTGATTCAGGC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
831 bp276 aa75905+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAWTEITRAQYRRDDLEYASDLRDAEWALIAPLMPERKRLGRPRRTDLRRVMEAILYIVTTGCQWRQLPRHFPAFTTVQGYFYRWIREGRWEAMNHILVI
LSREQDGRDATPSVGIIDSQSVKTAENSGPRGYDAGKKIKGRKRHIATDTLGHVVAAVVHPADVQDRDGAPLVATRIRSLFPWLRHLIGDGGYAGEKLRG
ALAELGRWTIEIVKRSDRAQGFVVLPKRWIVERSFAWLGRCRRLTRDVEATISSSHAWLMIAHIRRVLRKINQTAF

 

Blast result :
Comments
ISGdi3 is 98% aa similar to IS1032.
References
1] Miriam Land (2008) Direct submission.