ISGdi2

  • Family IS5
  • Group IS1031
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Gluconacetobacter diazotrophicus
Gluconacetobacter diazotrophicus
DNA section
IS Length : 883 bp

Ends


IR Length : 18

IRL : GAGCCTGTTTGGAAAGTCGCTGAAGTGTGATTCAAGCTCTGGATGTGGAC
IRR : GAGCCTGTTTGGAAAGTCATGGATGAGCGTTTCTTCGGGTGAGATTGGCG

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GAGCCTGTTTGGAAAGTCGCTGAAGTGTGATTCAAGCTCTGGATGTGGACGCCAGAGCAGAGAGGCCGCATGGCCAGGATTACCCGCAAGACGAAGCGTT
ATCCGTCTGATATGACGGAGGAGGAATGGGCGCGCATCGCGCCACTGATGCCCGAGCCGGGACGCACGGGGCGTCCGCGCGAGATCGAATTCCGCGAGGT
GATCAACGCGGTTCGTTACCTGGTTCGATCCGGCTGCGACTGGCGAATGCTGCCGATCCATTTCGGGCATTGGCGTACGGTCTATGGTTGGTTCAGGGAA
TTGGCCCGGCGGTTCCTGTTCCAGACCATTCATGATGTGGAACTGATGCTTGACCGGGAGCGCTCGGGCCGTGAAGCCAGCCCTTCGGCCGGAGTGATCG
ACAGCCAGAGCATCAAGGCGCCGCACGCGAAAACAAGAGGTTACGACGCTGGAAAGAAGATTGTCGGGCGCAAGCGGCATATCGCCGTGGATACGGACGG
ACGCCTGCTGATGGTCAACCTGACGCCGGCGGACATCTCCGACAGCGCCGGAGCGCAGATGATCCTGGACGCGATCCGCAAGCGCTGGCCGTGGGTCAAG
CATCTATTCGCGGACGGTGCCTATGACCGGCTCCAGTTGATGGACAAGGCTGCCTACCTGGACTTCGTCGTCGAGGTGATCCGTCGCAGGGACGGAGCGA
AAGGCTTTGAAGTTCTCCCCCGGCGCTGGGTCGTGGAGCGAACCTTCGGATGGATGACCCGATGGCGACGCCTCGTGCGCGATTACGAGCGTCGCATCGA
TGTCTCACAGGCCATGATCTTCGTCGCCATGGGCGCCAATCTCACCCGAAGAAACGCTCATCCATGACTTTCCAAACAGGCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
825 bp274 aa43867+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MWTPEQRGRMARITRKTKRYPSDMTEEEWARIAPLMPEPGRTGRPREIEFREVINAVRYLVRSGCGWRMLPIHFGHWRTVYGWFRELARRFLFQTIHDVE
LMLDRERSGREASPSAGVIDSQSIKAPHAKTRGYDAGKKIVGRKRHIAVDTDGRLLMVNLTPADISDSAGAQMILDAIRKRWPWVKHLFADGAYDRLQLM
DKAAYLDFVVEVIRRRDGAKGFEVLPRRWVVERTFGWMTRWRRLVRDYERRIDVSQAMIFVAMGANLTRRNAHP

 

Blast result :
Comments
ISGdi2 is 88% aa similar to IS12528.
References
1] Miriam Land (2008) Direct submission