ISGdi1

  • Family IS5
  • Group IS1031
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Gluconacetobacter diazotrophicus
Gluconacetobacter diazotrophicus
DNA section
IS Length : 930 bp

Ends


IR Length : 23/25

IRL : GAGCCCGATCCGAAAGTTTTTGAACAATACCAGCCTGTTGTGATTCATCC
IRR : GAGCCCGATCCGAAAGTTCTTCAACCGTGACAATGCCTTGCTGTCCGTCG

Insertion site


Left flankDirect repeatRight flankDR Length
CTCCAGCCTCTTAGAGCCCGATC3

DNA sequence

GAGCCCGATCCGAAAGTTTTTGAACAATACCAGCCTGTTGTGATTCATCCGTCTTTGCGAAGAGATGGAGTGAATGGTGACATGGACTGGTATTGCCCGA
CGTGAACATAGCCGGGAAGGGTTGCGATATCCATCGGATATGACGGACGGGGAGTGGGCTTTGATCATGCCATTTGTACCCCCGGCGAAACGGGGCGGTC
GCCCCCGCACTACGGATATGCGCGAGGTGGTCAACGCGATGCTCTACATAGCCTCGGCCGGGTGTGCGTGGCGCCTGCTGCCGAAATGCTTTCCGCCGGT
CTCGACCGTCAGGCGCTATTTTTACGCCTGGCGTGGTGCCGGAGTGTTCGAAGTCATGAATACGGTGCTGGTCATGAGCCTGCGCGAGATCGAGGGGCGT
GAAGCCTCTCCGAGCGCGGGCGTGATTGACAGCCAGTCGGTGAAAACCACGGAAAGTGGCGGGCTTTCGGGCTATGACGCGGGGAAGAAGGTCAAGGGCC
GCAAGCGCCATATTGTGACGGATACCTGCGGCTTCCTGATCTTTCTCCTCGTTCATGCCGCCGACATCCAGGACCGTGATGGGGCTGTTGATGTCCTGGC
AGCGATACGCAGGCGCTTTCCCTGGCTGCGCCACATCTTCGCTGATGGCGGCTATGCTGGCGACAAATTGCGATCCGCGCTCGCCTCCATGGGAAAATGG
ACCCTTGAAATCATCAGGCGGTCCGATACGGCGAAGGGCTTTCAGATCCTGCCGCGCCGCTGGGTGGTTGAACGGACATTCGCATGGCTGGGACGGTGCA
GGCGGCTCGCCAAAGACTGGGAACAATCCATTGCTTCCTCAACCGCATGGACATTGATCGCCTCGATCCGAATGCTCACACGACGGACAGCAAGGCATTG
TCACGGTTGAAGAACTTTCGGATCGGGCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
837 bp278 aa74910+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MVTWTGIARREHSREGLRYPSDMTDGEWALIMPFVPPAKRGGRPRTTDMREVVNAMLYIASAGCAWRLLPKCFPPVSTVRRYFYAWRGAGVFEVMNTVLV
MSLREIEGREASPSAGVIDSQSVKTTESGGLSGYDAGKKVKGRKRHIVTDTCGFLIFLLVHAADIQDRDGAVDVLAAIRRRFPWLRHIFADGGYAGDKLR
SALASMGKWTLEIIRRSDTAKGFQILPRRWVVERTFAWLGRCRRLAKDWEQSIASSTAWTLIASIRMLTRRTARHCHG

 

Blast result :
Comments
ISGdi1 is 98% aa similar to IS1031A.
References
1] Miriam Land (2008) Direct submission