ISWen3
- Family IS66
- Group ISBst12
Isoform Synonym(s) ISWpi5
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAGB00000000 | ND | Wolbachia endosymbiont | Wolbachia endosymbiont of Drosophila ananassae Wolbachia sp. wRi |
DNA section
IS Length : 1482 bp
Ends
IR Length : 18/20
IRL : GTATCCGTTCAGCGGAGTGGCAGAATAAGGTAGACAAGGTGATCTAAAAA
IRR : GTATCCGTTCAGGAGAGTGGTTTAAGAAACAATAGATAGGAGATTTTGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAAGAAAGTT | AAAATATA | AGTATACCTA | 8 |
AGTGGGATTG | AAATAATT | TTCTATAAAT | 8 |
TATTTTAAAA | TCCTGAAC | GTTTTGTAAG | 8 |
AGCGGTTACA | AATAATTT | ACCATTTCTT | 8 |
CGAAAAAAAA | GGCAAAAG | AAGCCTCGTG | 8 |
CAAGAAAGTT | AAAATATA | AGTATACCTA | 8 |
AATAAAAATT | AAAGAAGG | AGAGTTGGTT | 8 |
AATTTACCTT | CAAAAATG | AATGTTTGTA | 8 |
ATGAAAATGA | GATTAAAT | ACATTTTTAA | 8 |
TTTTCCATTT | GGTAAATT | TCTTAATGTT | 8 |
AGTGAGGTTA | GATGCAGT | AATGTTGATG | 8 |
CTACTCATAT | GGTTTGAG | CCCACCAGAG | 8 |
TAAAGATGCT | TTTTATTC | AAATTTTAAA | 8 |
CAGATGATAA | GTACATTT | AGCCTATTTA | 8 |
AGTGGGATTG | AAATAATT | TTCTATAAAT | 8 |
TTCTTTTATA | ACATATTT | TTAACTTACA | 8 |
TAAAGATGCT | TTTTATTC | AAATTTTAAA | 8 |
TACTAATTTA | ATAAAAAG | TAACGTTCTT | 8 |
GAATATAGCT | GAAATTTT | AGGTCTACTG | 8 |
CAAAAAGAAA | AAATATTC | TATTCATCCC | 8 |
TATTTTAAAA | TCCTGAAC | GTTTTGTAAG | 8 |
AAGAAATGGT | AAATTATT | TGTAACCGCT | 8 |
TACTTATACT | TCTTAAGC | CGTTTTGCTA | 8 |
CAGTCAGAAA | GCAGTTAG | AATAGGCTCT | 8 |
AAAAAGCTGT | CATATTTTAC | 0 | |
TGACATATCT | AAATTATTTG | 0 | |
CTCCTTCGAT | AAATTATTTG | 0 | |
TCGCAAAAAC | AAAAATTGAA | 0 | |
AAAATATTCA | AAATTATTTG | 0 | |
TACATTTTTA | CATATTTTAC | 0 |
DNA sequence
GTATCCGTTCAGCGGAGTGGCAGAATAAGGTAGACAAGGTGATCTAAAAAGATAATCATAGAGCAAAAGTGAAATAATATGGTAAACCTTTTAGAACTTT
GCAAAAATTTACAGCAAAAAATAGAAAGGTTAGAAGCAAAAATAGAAAGATTGGAAAAAGAGAATGAAAGTTTAAAAGCAGAAAATAAGGCTTTAAAGAT
AGAAAATGCTGAGTTAAGAGAAAGACTCGGTTTAAGCTCAAAAAATTCATCAATACCAAGTTCCAAAGAGTTGTATAAAATAAAAAAGAATAAGCCGAAA
AGCGAAAGGAATATTGGCGGTCAGGTTGGTCATAAAGGAAGTTTTCGCGCCAACATGGATGCAGATAAAGTAGTAAAGATAGAGTTGCCTAATACTTGCG
AATGCGGAGGAGAAATTGCAATATGTGAAAAACCATATATTCATCAGAAAGTTGATCTTCCAGAAATCAAGCCTTATGTAGTGGAATATCAGTTAGAACA
TGGCCGTTGTCGGAGATGCGGAAAGAGAAGAAGTAGCAAGTTACCGGAAGGTGTTACGCCAGATACATTTGGTCCAAGGGTTAAGTCAATAATTGCAGCG
TTCAGCGGATTCTACAAAAATTCAAAACGCGAAATAGCGAGTGTCGTAAATGATATCTTCAATTTGAACATAAGCGTCGGTAGCATATCAAATAGTGAAC
ATAGAGTTGCTTCAAAATGCAAAAAAATGTATGAGCAGATCGAACAAGAGATAAGTAGGAGTAAAGTTCTACATATTGATGAAACGAGCCATTATAACAA
AGGTAAACTCGCTTGGTGTTGGATGTTTGCAAGCAATACGGCAAGTTTTGTAAAATTTACAGAGTCAAGAGGAATGAAAGTTTTACAAAATAGTAAATTC
TGCAATCGCAATAGCTTGGTAATAACTGACAGGTATGCAGCATACAATTATTTTGCCGATAAAAACAGGCAAATCTGTTGGGCACATTTATCAAGAGATT
TTGAAAGATTAGCACATAGTTGGAATATTGAAGTTAAAGTTCTGGGTTGTTACTTGAGAAACGTGGCCACTGAATTATTTGCACTAAAAAAAGCTTTACT
AAAAAGTGAGATAGATGTTTTGAGGTTTGTCAGACGTGCCAGAAAATTAAGAAAACGTACAAAGTATTACTTGAAGGAGATATCTCGTTTACCTGAAGCA
ATTGGAGCCTCTCGAGTTGCAAAAAATGTTCTGAGATCTGAAAGAATGATGTGGAAATTTTTAGATGACCCAGAAAATATTCCGCTGACAAATAACCACG
CTGAACGGCAAATTCGGCATTATGTCGTTTATCGCAAAAACTCATATTTTACACAATCAAAGCGGGGAAATACATTCCTTGAGCGGATAATTTCATTATA
CTTAACTTGGAAACAAAGGGGTCTCAATCCTTTCCAAAATCTCCTATCTATTGTTTCTTAAACCACTCTCCTGAACGGATAC
GCAAAAATTTACAGCAAAAAATAGAAAGGTTAGAAGCAAAAATAGAAAGATTGGAAAAAGAGAATGAAAGTTTAAAAGCAGAAAATAAGGCTTTAAAGAT
AGAAAATGCTGAGTTAAGAGAAAGACTCGGTTTAAGCTCAAAAAATTCATCAATACCAAGTTCCAAAGAGTTGTATAAAATAAAAAAGAATAAGCCGAAA
AGCGAAAGGAATATTGGCGGTCAGGTTGGTCATAAAGGAAGTTTTCGCGCCAACATGGATGCAGATAAAGTAGTAAAGATAGAGTTGCCTAATACTTGCG
AATGCGGAGGAGAAATTGCAATATGTGAAAAACCATATATTCATCAGAAAGTTGATCTTCCAGAAATCAAGCCTTATGTAGTGGAATATCAGTTAGAACA
TGGCCGTTGTCGGAGATGCGGAAAGAGAAGAAGTAGCAAGTTACCGGAAGGTGTTACGCCAGATACATTTGGTCCAAGGGTTAAGTCAATAATTGCAGCG
TTCAGCGGATTCTACAAAAATTCAAAACGCGAAATAGCGAGTGTCGTAAATGATATCTTCAATTTGAACATAAGCGTCGGTAGCATATCAAATAGTGAAC
ATAGAGTTGCTTCAAAATGCAAAAAAATGTATGAGCAGATCGAACAAGAGATAAGTAGGAGTAAAGTTCTACATATTGATGAAACGAGCCATTATAACAA
AGGTAAACTCGCTTGGTGTTGGATGTTTGCAAGCAATACGGCAAGTTTTGTAAAATTTACAGAGTCAAGAGGAATGAAAGTTTTACAAAATAGTAAATTC
TGCAATCGCAATAGCTTGGTAATAACTGACAGGTATGCAGCATACAATTATTTTGCCGATAAAAACAGGCAAATCTGTTGGGCACATTTATCAAGAGATT
TTGAAAGATTAGCACATAGTTGGAATATTGAAGTTAAAGTTCTGGGTTGTTACTTGAGAAACGTGGCCACTGAATTATTTGCACTAAAAAAAGCTTTACT
AAAAAGTGAGATAGATGTTTTGAGGTTTGTCAGACGTGCCAGAAAATTAAGAAAACGTACAAAGTATTACTTGAAGGAGATATCTCGTTTACCTGAAGCA
ATTGGAGCCTCTCGAGTTGCAAAAAATGTTCTGAGATCTGAAAGAATGATGTGGAAATTTTTAGATGACCCAGAAAATATTCCGCTGACAAATAACCACG
CTGAACGGCAAATTCGGCATTATGTCGTTTATCGCAAAAACTCATATTTTACACAATCAAAGCGGGGAAATACATTCCTTGAGCGGATAATTTCATTATA
CTTAACTTGGAAACAAAGGGGTCTCAATCCTTTCCAAAATCTCCTATCTATTGTTTCTTAAACCACTCTCCTGAACGGATAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1393 bp | 460 aa | 69 | 1461 | + | No |
Chemistry : DDE
ORF sequence :
VVNLLELCKNLQQKIERLEAKIERLEKENESLKAENKALKIENAELRERLGLSSKNSSIPSSKELYKIKKNKPKSERNIGGQVGHKGSFRANMDADKVVK
IELPNTCECGGEIAICEKPYIHQKVDLPEIKPYVVEYQLEHGRCRRCGKRRSSKLPEGVTPDTFGPRVKSIIAAFSGFYKNSKREIASVVNDIFNLNISV
GSISNSEHRVASKCKKMYEQIEQEISRSKVLHIDETSHYNKGKLAWCWMFASNTASFVKFTESRGMKVLQNSKFCNRNSLVITDRYAAYNYFADKNRQIC
WAHLSRDFERLAHSWNIEVKVLGCYLRNVATELFALKKALLKSEIDVLRFVRRARKLRKRTKYYLKEISRLPEAIGASRVAKNVLRSERMMWKFLDDPEN
IPLTNNHAERQIRHYVVYRKNSYFTQSKRGNTFLERIISLYLTWKQRGLNPFQNLLSIVS
IELPNTCECGGEIAICEKPYIHQKVDLPEIKPYVVEYQLEHGRCRRCGKRRSSKLPEGVTPDTFGPRVKSIIAAFSGFYKNSKREIASVVNDIFNLNISV
GSISNSEHRVASKCKKMYEQIEQEISRSKVLHIDETSHYNKGKLAWCWMFASNTASFVKFTESRGMKVLQNSKFCNRNSLVITDRYAAYNYFADKNRQIC
WAHLSRDFERLAHSWNIEVKVLGCYLRNVATELFALKKALLKSEIDVLRFVRRARKLRKRTKYYLKEISRLPEAIGASRVAKNVLRSERMMWKFLDDPEN
IPLTNNHAERQIRHYVVYRKNSYFTQSKRGNTFLERIISLYLTWKQRGLNPFQNLLSIVS
Blast result :
Comments
Additional accession number: NC_012416.
ISWen3 is 51% aa similar to ISStau2.
ISWen3 is 51% aa similar to ISStau2.
References
1] ISfinder annotation (2008).
2] Salzberg,S.L., Dunning Hotopp,J., Delcher,A.L., Pop,M., Eisen,M.B. and Nelson,W.C. (2005) Direct Submission GenBank.
2] Salzberg,S.L., Dunning Hotopp,J., Delcher,A.L., Pop,M., Eisen,M.B. and Nelson,W.C. (2005) Direct Submission GenBank.