ISBsph2
- Family IS200/IS605
- Group IS200
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AJ866975 | ND | Bacillus sphaericus | Bacillus sphaericus JG-A12 |
DNA section
IS Length : 738 bp
Ends
Left end : GTGTGTTAAATAGGGAGAGCCCATTGCAATGCAGGTGGTTTTGGAAAGCTTTTAGCTATGGACAACAAAAAAACTCCAATCGTACAATAAAATCAGGTCT II struct. : No
Right end : TATGGTTGGCGGACCTTTCAGAACGTCGTTGGACATAAGATATTTAAATAGCGTTTACGCGTAAAGAAACCCACCAGTTTTACTGGTGGGTTTTTATCAG II struct. : No
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|
DNA sequence
GTGTGTTAAATAGGGAGAGCCCATTGCAATGCAGGTGGTTTTGGAAAGCTTTTAGCTATGGACAACAAAAAAACTCCAATCGTACAATAAAATCAGGTCT
AGTCAACCGATTTTGTACGAAAGGAGCTCCAAATGGATAGTAAAAGTTTAGCACATACAACATGGAATTGTAAGTATCATATTGTTTTTGTACCGAAATA
TAGAAGACAAGTTATTTATCGTAAAATCAAAGCAGAAATAGGAAAAATACTTCGTCAGTTATGTGAAAGAAAAGGTGTAGAAATTGTAGAAGCAACAGCG
TGTTCGGATCATATTTATATGGTGGTGAAGATTCCTCCGAAACTAAGTGTATCTGCTTTTATGGGCTATTTAAAAGGGAAAAGTAGCGTCATGATTTTTA
ATCGACATGATAGTTTAAAGTACCAATTGGGAAATCGCCAATTTTGGTGTCGTGGATACCTAGTGGATACAGTTAGTCGAAATCAAAAAGTGATTCACAA
GTATATCAAAAAACAATTACAAGAAGATTTACGCTATGATCAAATGTCAATAAATGAAATCATTGACCCTTTAAATTGTGAATAAATTAACTGGAAGAAG
AAAAAAGTCTGCCGCTTTAGCGGTTTGTAGAAAAGAAGTATGGTTGGCGGACCTTTCAGAACGTCGTTGGACATAAGATATTTAAATAGCGTTTACGCGT
AAAGAAACCCACCAGTTTTACTGGTGGGTTTTTATCAG
AGTCAACCGATTTTGTACGAAAGGAGCTCCAAATGGATAGTAAAAGTTTAGCACATACAACATGGAATTGTAAGTATCATATTGTTTTTGTACCGAAATA
TAGAAGACAAGTTATTTATCGTAAAATCAAAGCAGAAATAGGAAAAATACTTCGTCAGTTATGTGAAAGAAAAGGTGTAGAAATTGTAGAAGCAACAGCG
TGTTCGGATCATATTTATATGGTGGTGAAGATTCCTCCGAAACTAAGTGTATCTGCTTTTATGGGCTATTTAAAAGGGAAAAGTAGCGTCATGATTTTTA
ATCGACATGATAGTTTAAAGTACCAATTGGGAAATCGCCAATTTTGGTGTCGTGGATACCTAGTGGATACAGTTAGTCGAAATCAAAAAGTGATTCACAA
GTATATCAAAAAACAATTACAAGAAGATTTACGCTATGATCAAATGTCAATAAATGAAATCATTGACCCTTTAAATTGTGAATAAATTAACTGGAAGAAG
AAAAAAGTCTGCCGCTTTAGCGGTTTGTAGAAAAGAAGTATGGTTGGCGGACCTTTCAGAACGTCGTTGGACATAAGATATTTAAATAGCGTTTACGCGT
AAAGAAACCCACCAGTTTTACTGGTGGGTTTTTATCAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
453 bp | 150 aa | 133 | 585 | + | No |
Chemistry : Y1
ORF sequence :
MDSKSLAHTTWNCKYHIVFVPKYRRQVIYRKIKAEIGKILRQLCERKGVEIVEATACSDHIYMVVKIPPKLSVSAFMGYLKGKSSVMIFNRHDSLKYQLG
NRQFWCRGYLVDTVSRNQKVIHKYIKKQLQEDLRYDQMSINEIIDPLNCE
NRQFWCRGYLVDTVSRNQKVIHKYIKKQLQEDLRYDQMSINEIIDPLNCE
Blast result :
Comments
ISBsph2 is 83% aa similar to ISSep3.
References
1] Katrin Pollmann (2005) Direct submission