ISBsph2

  • Family IS200/IS605
  • Group IS200
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AJ866975 ND Bacillus sphaericus
Bacillus sphaericus JG-A12
DNA section
IS Length : 738 bp

Ends


Left end : GTGTGTTAAATAGGGAGAGCCCATTGCAATGCAGGTGGTTTTGGAAAGCTTTTAGCTATGGACAACAAAAAAACTCCAATCGTACAATAAAATCAGGTCT II struct. : No
Right end : TATGGTTGGCGGACCTTTCAGAACGTCGTTGGACATAAGATATTTAAATAGCGTTTACGCGTAAAGAAACCCACCAGTTTTACTGGTGGGTTTTTATCAG II struct. : No

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site

DNA sequence

GTGTGTTAAATAGGGAGAGCCCATTGCAATGCAGGTGGTTTTGGAAAGCTTTTAGCTATGGACAACAAAAAAACTCCAATCGTACAATAAAATCAGGTCT
AGTCAACCGATTTTGTACGAAAGGAGCTCCAAATGGATAGTAAAAGTTTAGCACATACAACATGGAATTGTAAGTATCATATTGTTTTTGTACCGAAATA
TAGAAGACAAGTTATTTATCGTAAAATCAAAGCAGAAATAGGAAAAATACTTCGTCAGTTATGTGAAAGAAAAGGTGTAGAAATTGTAGAAGCAACAGCG
TGTTCGGATCATATTTATATGGTGGTGAAGATTCCTCCGAAACTAAGTGTATCTGCTTTTATGGGCTATTTAAAAGGGAAAAGTAGCGTCATGATTTTTA
ATCGACATGATAGTTTAAAGTACCAATTGGGAAATCGCCAATTTTGGTGTCGTGGATACCTAGTGGATACAGTTAGTCGAAATCAAAAAGTGATTCACAA
GTATATCAAAAAACAATTACAAGAAGATTTACGCTATGATCAAATGTCAATAAATGAAATCATTGACCCTTTAAATTGTGAATAAATTAACTGGAAGAAG
AAAAAAGTCTGCCGCTTTAGCGGTTTGTAGAAAAGAAGTATGGTTGGCGGACCTTTCAGAACGTCGTTGGACATAAGATATTTAAATAGCGTTTACGCGT
AAAGAAACCCACCAGTTTTACTGGTGGGTTTTTATCAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
453 bp150 aa133585+No
ORF function : Transposase
Chemistry : Y1

ORF sequence :

MDSKSLAHTTWNCKYHIVFVPKYRRQVIYRKIKAEIGKILRQLCERKGVEIVEATACSDHIYMVVKIPPKLSVSAFMGYLKGKSSVMIFNRHDSLKYQLG
NRQFWCRGYLVDTVSRNQKVIHKYIKKQLQEDLRYDQMSINEIIDPLNCE

 

Blast result :
Comments
ISBsph2 is 83% aa similar to ISSep3.
References
1] Katrin Pollmann (2005) Direct submission