ISArch15
- Family IS66
- Group ISBst12
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| AY714842 | ND | Uncultured archaeon | Uncultured archaeon GZfos26F9 clone GZfos26F9 |
DNA section
IS Length : 1427 bp
Ends
IR Length : 13
IRL : GTATGTGTTTAGCTCCATCTACAACCATTTCATCCTTCCCACCTCAACAG
IRR : GTATGTGTTTAGCCACTCAGCATCAACTTCAACCTCAACATCTGAAAGCT
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| AATTTAACTA | AACAAATG | GATGTATTTG | 8 |
DNA sequence
GTATGTGTTTAGCTCCATCTACAACCATTTCATCCTTCCCACCTCAACAGCCATCTAAAATCCGGTTAAAACCGAAAAACTATTATATTATGAGAGCAAT
ACCCTATCTAGAGGAGGATGGACAAAGACGAGATTATCAGACAACTCAAACGTGAGAATGAGCTGCTTAAGACACGCATAGAGGAACTCGAGGCCCAACT
GGCTAGATATGAGAACCCGCATACCCCTCCAAGCATGAAACGCGGTGGCAATAGCAGAAGGAATCCGAAGAAAAGCGGGGGAGAGAAGCCAGGTCAGAAG
AAAGGGCACAAAGGGGTGACGAGACAACGGGCAGAACCAGATAGGCAGGTAGAGGTCCGGATGGGTCGGTGCCCGTACTGCGATGCCGAGCTTGGTGATC
CGGTCAGCGTAGAATCGAAGATCATCGAGGAGATCCCAGAACCACAACCAGTTATCGTCACCGAATACAAAATTGCACATTATGCATGCCCGGGGTGTCA
TAGAGAAGTCGTTGCAAGCGATCCCGACTGCCCAAAAGAAGGCATATTCGGTAATAACACGATAGCTCAAGCGGCAGTGCTGAAATACGAGGAGCGGTTG
CCACACCGTAAGATCCAGAATGTTTTGAAGCGGCAATACGGATTGGATATAAGTCCTGCTACGATACTTGATCTCACACGTCGTGCCTCCGATGCGGTTC
GATCGGAATATGAAGAAATTCTGGACAGAATCCGCGGTGCTGAGGTACTGTATGTGGATGAAACGTCAATCAGGGTTCAGGGAAAGAAGCACTGGATCTG
GGCATTCACCACGCCGACAGAGACCTTTGTCGTAATACGGAAGAGTCGAGGTATGAAAGTGCTTATGGAAATTCTGACAAGACGGTTCACGGGAATAATC
GTGTGCGATGGCTGGAAACCGTATGCCAAGTTCACAAAGCGTATACAGCGATGTTGGGCGCATCTTCTTCGAGAATCCGAGTATCTTGCCGAGAAGATTG
CGGAGGCTGCTCCGTTGGATAAAGCACTTAGAAGGCTCTATCGGAAACTGAATGACGCACTGGAAGCGGATCCTCCGCCCGAAACGCGGCGGCAGTTGTG
GTATATAGCGCGAGCAGCGCTCAGACGATGGATCAGGAGAGAATACGCCAGCGAGAAGGTGGAAAAGTTCATCAACAAGATAGAGAATGGCTTTGAGTAT
TGGTTCACGTTCGTTCTTCGTTCAGATGTGGAACCGACCAACAACAGAGCAGAGAGGGCGCTTCGTGAGCACGTTGTCCAGCGGAAGATTATCGGAACAC
TGCGTAATGAGAAAGGAACATCTATTCATGAAAGAATCATGACAGTACTGACAACGTGGGCGCAGCAAGGGCTTAACAGCTTTCAGATGTTGAGGTTGAA
GTTGATGCTGAGTGGCTAAACACATAC
ACCCTATCTAGAGGAGGATGGACAAAGACGAGATTATCAGACAACTCAAACGTGAGAATGAGCTGCTTAAGACACGCATAGAGGAACTCGAGGCCCAACT
GGCTAGATATGAGAACCCGCATACCCCTCCAAGCATGAAACGCGGTGGCAATAGCAGAAGGAATCCGAAGAAAAGCGGGGGAGAGAAGCCAGGTCAGAAG
AAAGGGCACAAAGGGGTGACGAGACAACGGGCAGAACCAGATAGGCAGGTAGAGGTCCGGATGGGTCGGTGCCCGTACTGCGATGCCGAGCTTGGTGATC
CGGTCAGCGTAGAATCGAAGATCATCGAGGAGATCCCAGAACCACAACCAGTTATCGTCACCGAATACAAAATTGCACATTATGCATGCCCGGGGTGTCA
TAGAGAAGTCGTTGCAAGCGATCCCGACTGCCCAAAAGAAGGCATATTCGGTAATAACACGATAGCTCAAGCGGCAGTGCTGAAATACGAGGAGCGGTTG
CCACACCGTAAGATCCAGAATGTTTTGAAGCGGCAATACGGATTGGATATAAGTCCTGCTACGATACTTGATCTCACACGTCGTGCCTCCGATGCGGTTC
GATCGGAATATGAAGAAATTCTGGACAGAATCCGCGGTGCTGAGGTACTGTATGTGGATGAAACGTCAATCAGGGTTCAGGGAAAGAAGCACTGGATCTG
GGCATTCACCACGCCGACAGAGACCTTTGTCGTAATACGGAAGAGTCGAGGTATGAAAGTGCTTATGGAAATTCTGACAAGACGGTTCACGGGAATAATC
GTGTGCGATGGCTGGAAACCGTATGCCAAGTTCACAAAGCGTATACAGCGATGTTGGGCGCATCTTCTTCGAGAATCCGAGTATCTTGCCGAGAAGATTG
CGGAGGCTGCTCCGTTGGATAAAGCACTTAGAAGGCTCTATCGGAAACTGAATGACGCACTGGAAGCGGATCCTCCGCCCGAAACGCGGCGGCAGTTGTG
GTATATAGCGCGAGCAGCGCTCAGACGATGGATCAGGAGAGAATACGCCAGCGAGAAGGTGGAAAAGTTCATCAACAAGATAGAGAATGGCTTTGAGTAT
TGGTTCACGTTCGTTCTTCGTTCAGATGTGGAACCGACCAACAACAGAGCAGAGAGGGCGCTTCGTGAGCACGTTGTCCAGCGGAAGATTATCGGAACAC
TGCGTAATGAGAAAGGAACATCTATTCATGAAAGAATCATGACAGTACTGACAACGTGGGCGCAGCAAGGGCTTAACAGCTTTCAGATGTTGAGGTTGAA
GTTGATGCTGAGTGGCTAAACACATAC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1302 bp | 433 aa | 118 | 1419 | + | No |
Chemistry : DDE
ORF sequence :
MDKDEIIRQLKRENELLKTRIEELEAQLARYENPHTPPSMKRGGNSRRNPKKSGGEKPGQKKGHKGVTRQRAEPDRQVEVRMGRCPYCDAELGDPVSVES
KIIEEIPEPQPVIVTEYKIAHYACPGCHREVVASDPDCPKEGIFGNNTIAQAAVLKYEERLPHRKIQNVLKRQYGLDISPATILDLTRRASDAVRSEYEE
ILDRIRGAEVLYVDETSIRVQGKKHWIWAFTTPTETFVVIRKSRGMKVLMEILTRRFTGIIVCDGWKPYAKFTKRIQRCWAHLLRESEYLAEKIAEAAPL
DKALRRLYRKLNDALEADPPPETRRQLWYIARAALRRWIRREYASEKVEKFINKIENGFEYWFTFVLRSDVEPTNNRAERALREHVVQRKIIGTLRNEKG
TSIHERIMTVLTTWAQQGLNSFQMLRLKLMLSG
KIIEEIPEPQPVIVTEYKIAHYACPGCHREVVASDPDCPKEGIFGNNTIAQAAVLKYEERLPHRKIQNVLKRQYGLDISPATILDLTRRASDAVRSEYEE
ILDRIRGAEVLYVDETSIRVQGKKHWIWAFTTPTETFVVIRKSRGMKVLMEILTRRFTGIIVCDGWKPYAKFTKRIQRCWAHLLRESEYLAEKIAEAAPL
DKALRRLYRKLNDALEADPPPETRRQLWYIARAALRRWIRREYASEKVEKFINKIENGFEYWFTFVLRSDVEPTNNRAERALREHVVQRKIIGTLRNEKG
TSIHERIMTVLTTWAQQGLNSFQMLRLKLMLSG
Blast result :
Comments
ISArch15 is 60% aa similar to ISH10.
References
1] Hallam,S.J., Putnam,N., Preston,C.M., Detter,J.C., Rokhsar,D., Richardson,P.M. and DeLong,E.F. (2004) Science 305 (5689), 1457-1462.
2] Hallam,S.J., Preston,C.M. and DeLong,E.F. (2004) Direct Submission GenBank.
3] Putnam,N., Detter,J.C., Richardson,P.M. and Rokhsar,D. (2004) Direct Submission GenBank.
2] ISfinder annotation (2008).
2] Hallam,S.J., Preston,C.M. and DeLong,E.F. (2004) Direct Submission GenBank.
3] Putnam,N., Detter,J.C., Richardson,P.M. and Rokhsar,D. (2004) Direct Submission GenBank.
2] ISfinder annotation (2008).