ISRssp2
- Family IS1595
- Group ISNha5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Roseovarius sp. | Roseovarius sp. 217 |
DNA section
IS Length : 4633 bp
Ends
IR Length : 26
IRL : CGGCCTTATGTATCAAACGCACCAACCCGAGGGCTGAGCGATGATTAGCA
IRR : CGGCCTTATGTATCAAACGCACCAACAATCTAGGCAGCCGACTCATAAAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CGGATGTGGTTTTCATG | GACATTTC | CATGCCGGAAATGG | 8 |
DNA sequence
CGGCCTTATGTATCAAACGCACCAACCCGAGGGCTGAGCGATGATTAGCACATTGGCACTATGCGTTGCGGTTTCCATTTGTGATTTGGAAGATAGGAAC
AACAGCCATGTTTTCCCTGTTTATAGTTTTCACTCTGTGATTAACGCTTCCAAACTCGCGAATAACACCGTCATTCTTGAAAACCGTTTTGCTGGAAATA
CACACGTAAACCGTGAACGAAACGTACCCCTTCACCTCGAACGGCTCCGCGAAAAGAATATCGACATTCTTTTTGTCCCCGCTCGCAATATCACCAATCT
GCTTTGGCTTAGAAAAGAGGTCAACCGAGATATCCGCCTCCACTCTGACGTCAGTTACGCGGAGATTCACATTTCTGGCCGGAGAGTTACCGCTGTTGTG
GATAGTAAGCCTTACATAATTATGGCCTTCACGTCCGGGCCTTCCATTTCGGAAGTATTTTGCACCAGTGATACTAAGATATGCCCTAGTTTGCGCTTGG
CCGATTTCCCTGGTGTCAGTGGCCATTCTTTGGGTGGCCTTGAGGGTTTGCCAAACAAAGATTACACCAAGGCCAGTAATCAAGGCCACTATTACAGTGG
CTACAAGCATCCAAAAAGCCCACAGGGCCATTTCCGTTTGGGCCTCAAGGTCATCCTGAGCGCGTTGGTCCTCGTTGGTGGAGTTTATAATTTCGGCTAC
GCATTTAGAAAAATTGGACAGGTCACTAATGAGGCAGGATTGCTCTATTTGATTAGTGGCATGTGCGGCATAGCGGCTGGTGTGATAGGCATTCTTGGCT
TTGGTTTCGCCCAATTTTAGACCAGTAGCATAGACGCCCCATCCAATCGCTAAAATTACTGCTAGTCCAAGTGTAACTGATATGATCCAATAGCGTTTAG
GCATTGCAACATAAACGCCGCCGAAAACTTCCCTCGGGATAGCTTGTTGCGGACGTTCACTTCCTTTTCACTGATTCCAATATTTGCCAGCTTTTCAACT
AGCTGAGCATAAGTCACGCCTTTCCGCTTCAGCTCTGCTTTTAGAAGGTTTGCGGCCTTCATTTCCCATTCCGTTTGTGTCGGCATGTATCACCTTTATG
TTTAAAAGTATCATATTTATTACTTATGCCCTTGCATGGGATACGTCAACGCACTATATACGTTACATAAGAAACGGATGTAGTGACAATGGCCCAGCAT
TTTCTTCTCTCAGCAGCATCACGCACACTCAGCCTTCGCCAGATCTACAAGGCAGGCGAAGACGCGGCTTACCAGACGTTCTGCGAAATGCGCTGGTCTG
AGACAAATGGCGAGGCAGTTTGCCCGCGGTGTTCGAACCATGAGACCTACAAGATCACCACGCGCCGCAAGTTTAAGTGCAAGGCATGCGCGCACCAATT
CAGCGTGACGAGCGGCACGATCTTTGCCAGCCGCAAGATGGATTTTGTAGACCTTCTGGCCGCGATCTGCATCATCGTGAATGGGGCCAAGGGCGTTTCC
ATGATCCAGCTTTCCCGCGATCTGGACTGCCAATACAAGACCGCTTTCGTTCTGGCGCACAAACTGCGCGAGGCAATGGCGCAAGAGGTCCAGACAGGCG
AAGTGCTGCAAGGCCACGTCGAGATTGATGGCGCATACTTTGGCGGCCATATTCGCCCTGAGAACGCCAAGGCAGACCGCAAGGACCGCCGCTTGAAAGC
ACACCAGACCGGCAAGCGCCGCGTGGTTATCGCCATGCGTGAGCGCACTGGCCGCACCCTGCCCGTTGTAGGCATGTCTGAGGCCGAAGGCGTTGCACTG
GCAAACGAGAACGTGTGCCGCATGGCCACCATGTCAGCCGATGAGGCAAGCCATTGGGATGAGTTGCACATGGGCTGGTCGGTTGACCGCGTGAACCACA
GTGAGATTTACAGCGACCACGGCAAGCACACCAACATGGTTGAAAGCTATTTCTCGCGCCTGCGCCGCATGGTGACAGGCCAGCATCACCACGTTAGCCC
GCAATACCTTTACCAGTATGCGAACCACGCTGCATGGCTTGAGGACAACCGTCGCTTTGACAACGGCGAACTGGCACACCGTCTGGTGTCTAACGCAATG
GACGCGCCAGTTAGCCGTAATTGGAAAGGGTATTGGCAGCGCGCGGCTTAATGTTCACGCTGCCATTTTATATTCTGACACATCGAGCGTCACGTTGTCG
CTTTCTGACAACTTATAAGCTTTCTTGTACGCAGACCTCTTCGCGTTATCCGAAATTAGGGCATCGCCAAATTGGGAAACAAGAGCAATGAAGATGTCAC
GGACATGAACGAAGTCACTGTCGGTGAGTTGAAGCGTGGGCTTTATTTTTTTAAGAAATACGTTCTTCAAGCCCTTTAGCCGGAAACCCACCATCTCCCC
GTCTTCATCATAAGTTATTGTCAAAAACTGATCTATACGATCCGAAATTGTAAGGGTATCCCGTTGTACATAGTCGATGTAATCCATGCTGGGGAAATAC
ACGGCTACTTTAGAAAACTCCTTGCCTTCAACGGGCTGGAAGTCCGTCGATTCAACATGTTTTGTCATTACAGCCTCCAAACTTGCACCTTGTATCTGAC
TTCTGCCTCATAAGGAACGGTTGGCGCGTTTTCGTCGTTCTTTACCCATTCCCACGAAAGGATCATACCACTTGAGCCAGCAGATGTCTCTTGCTTATAA
CGACGAACATAGCAAGCGAAAACGGCATTTTTAGGACTTGGGCATGATTTTGCAACGCAAACCATATGCGGTACATACCTATAGAAAGTACTCGGGCTGG
ATATAAAAACATACACCTCTTCTCCATTGTCGGACCCATCAATTGGTCGCTCCAATCCACGGTAAACCGCATGAGAGGCCAGCATACCTTTCAGAACAAC
CTTTCTGCCATCTTCGTGATATCCAATATTGTTTACGGGCGGCGCGCACCCTTTAACACACGTCCAAAAATCCATTAAGGATTGTCGGCGCAAGTGGATT
GCGTTTTGCTTCACCCAAGATGCTGAAACATCAAGCTTCATCATTTCATTTTGATCATCAAAATGAGGTGCCGCAATTGTGTAATCTTCTATCTCAGCGA
AAACCATGCTCGATTATTCCTTGTTGATGGGGTTATCGAGCATTGACTGTTTGTCCATTCTGTGGGACATATGTTGTGTGTTTGCGTTGCTCGACAACGT
GGTTTAGAGGGGGTCCGCTAGAATTAGCGTGACCCCTTCCTTTTGACCATAGGGCATGTGCCGCTCAGAGTCCATAGAAGGGCAACTGGAGTTGCGTCTT
TTAAATTCGGGGAATGGGTAGTCAAAAAAAGAAATCGGCACTGTGCGGGCCTCTCTGGCTCTCATATGGGAAATTGCGAAGTTCCCCATAGCGCTCCGTT
ACGTTCCACCCAGCCTTTGCGCCGCAGATTGTGCAGCGCCTGATACATGCGCCCGCGCGCTTCCTCATAGGTCATATCAGTGACTGATGCGGCATAGAGC
GACACTTCCTTGCCAGTCTTAGGACCGCTGCGCAGAGCGTCCATTGCCAGTATCGACGTATCACGCCTCTGAGCGATCTTGCGGGGAACTGCATGCGCAG
ACAGATCAACACCGCGCATCACAAGCAACGCCTCTACATGCTCCAGACCGTCTAGGCTGTCGCGGATCATCTGCGCTCGAAGGTGCAGCAATGCGTTTGT
GACTGTCTTATCCAACATACCCGCATTGTGATTCACATGGGCGCGAAAATCAGCTAGGCAGCACACTCATTAATTCTTGTTTAGAAGCATAAGTTTGTGA
TTCACTCTCGCACAAAACTGGGCGGGAGAATGCAAATGGCGCGATCAGATATGAGCGATCTGGAATGGGAGTTCATCAAAGCTGTCTTGCCCAACAAAAC
ACGTGGCAAGAAGCGGGTTGATGACCGCCGCGTGATCAACGGCATTTTCTACGTCCTGCGCACCGGCATCCCTTGGGCTGATCTACCAGAGCAATACGGC
CCACCGACCACGGTCTACAACCGCTTCAACCGGTGGAGCTATGCAGGCCACTGGGACCGGATCATGGAGGCCATCGCCGACGCGCATAACGTTGACATGG
TGATGGTCGACGGGACCAGCGTGCGTGCGCATCATTCCGCCACCACGCTCAAAAAAAGACCCACGCCGCTGTTTAGGTCGTTCACGGGGCGGATTAGGGA
CGAAAATACATGCACTTACCAATCAGGATGGGCTGCCGATCCGATATGAATTGACACCCGGTCAAGCCCATGACGCGCCGCCGTGCAAGACGCTACTGGA
CAACTTGCAACCTGGACAACATGTGCTCGCGGATAAAGCATATGACGCAGACTGGATCAGGGATATGATCTGGGAACAGGGGGCTATCGACGTGATCCCT
CCCAAGGCCAACCGTAAACTACCCGCCGAATTTGATGCTGAAATCTACCGGGAACGCAACAAAATCGAGCGCTTCTTTGGCAGGCTGAAAGCCTCGTTCC
GCCGTATCGCAACCCGATACGAGAAGACCTCACGCAATTTCCTGTCGATGATCAAACTGGCATCGATCAGGCTGTGGATCGAGTTTTATGAGTCGGCTGC
CTAGATTGTTGGTGCGTTTGATACATAAGGCCG
AACAGCCATGTTTTCCCTGTTTATAGTTTTCACTCTGTGATTAACGCTTCCAAACTCGCGAATAACACCGTCATTCTTGAAAACCGTTTTGCTGGAAATA
CACACGTAAACCGTGAACGAAACGTACCCCTTCACCTCGAACGGCTCCGCGAAAAGAATATCGACATTCTTTTTGTCCCCGCTCGCAATATCACCAATCT
GCTTTGGCTTAGAAAAGAGGTCAACCGAGATATCCGCCTCCACTCTGACGTCAGTTACGCGGAGATTCACATTTCTGGCCGGAGAGTTACCGCTGTTGTG
GATAGTAAGCCTTACATAATTATGGCCTTCACGTCCGGGCCTTCCATTTCGGAAGTATTTTGCACCAGTGATACTAAGATATGCCCTAGTTTGCGCTTGG
CCGATTTCCCTGGTGTCAGTGGCCATTCTTTGGGTGGCCTTGAGGGTTTGCCAAACAAAGATTACACCAAGGCCAGTAATCAAGGCCACTATTACAGTGG
CTACAAGCATCCAAAAAGCCCACAGGGCCATTTCCGTTTGGGCCTCAAGGTCATCCTGAGCGCGTTGGTCCTCGTTGGTGGAGTTTATAATTTCGGCTAC
GCATTTAGAAAAATTGGACAGGTCACTAATGAGGCAGGATTGCTCTATTTGATTAGTGGCATGTGCGGCATAGCGGCTGGTGTGATAGGCATTCTTGGCT
TTGGTTTCGCCCAATTTTAGACCAGTAGCATAGACGCCCCATCCAATCGCTAAAATTACTGCTAGTCCAAGTGTAACTGATATGATCCAATAGCGTTTAG
GCATTGCAACATAAACGCCGCCGAAAACTTCCCTCGGGATAGCTTGTTGCGGACGTTCACTTCCTTTTCACTGATTCCAATATTTGCCAGCTTTTCAACT
AGCTGAGCATAAGTCACGCCTTTCCGCTTCAGCTCTGCTTTTAGAAGGTTTGCGGCCTTCATTTCCCATTCCGTTTGTGTCGGCATGTATCACCTTTATG
TTTAAAAGTATCATATTTATTACTTATGCCCTTGCATGGGATACGTCAACGCACTATATACGTTACATAAGAAACGGATGTAGTGACAATGGCCCAGCAT
TTTCTTCTCTCAGCAGCATCACGCACACTCAGCCTTCGCCAGATCTACAAGGCAGGCGAAGACGCGGCTTACCAGACGTTCTGCGAAATGCGCTGGTCTG
AGACAAATGGCGAGGCAGTTTGCCCGCGGTGTTCGAACCATGAGACCTACAAGATCACCACGCGCCGCAAGTTTAAGTGCAAGGCATGCGCGCACCAATT
CAGCGTGACGAGCGGCACGATCTTTGCCAGCCGCAAGATGGATTTTGTAGACCTTCTGGCCGCGATCTGCATCATCGTGAATGGGGCCAAGGGCGTTTCC
ATGATCCAGCTTTCCCGCGATCTGGACTGCCAATACAAGACCGCTTTCGTTCTGGCGCACAAACTGCGCGAGGCAATGGCGCAAGAGGTCCAGACAGGCG
AAGTGCTGCAAGGCCACGTCGAGATTGATGGCGCATACTTTGGCGGCCATATTCGCCCTGAGAACGCCAAGGCAGACCGCAAGGACCGCCGCTTGAAAGC
ACACCAGACCGGCAAGCGCCGCGTGGTTATCGCCATGCGTGAGCGCACTGGCCGCACCCTGCCCGTTGTAGGCATGTCTGAGGCCGAAGGCGTTGCACTG
GCAAACGAGAACGTGTGCCGCATGGCCACCATGTCAGCCGATGAGGCAAGCCATTGGGATGAGTTGCACATGGGCTGGTCGGTTGACCGCGTGAACCACA
GTGAGATTTACAGCGACCACGGCAAGCACACCAACATGGTTGAAAGCTATTTCTCGCGCCTGCGCCGCATGGTGACAGGCCAGCATCACCACGTTAGCCC
GCAATACCTTTACCAGTATGCGAACCACGCTGCATGGCTTGAGGACAACCGTCGCTTTGACAACGGCGAACTGGCACACCGTCTGGTGTCTAACGCAATG
GACGCGCCAGTTAGCCGTAATTGGAAAGGGTATTGGCAGCGCGCGGCTTAATGTTCACGCTGCCATTTTATATTCTGACACATCGAGCGTCACGTTGTCG
CTTTCTGACAACTTATAAGCTTTCTTGTACGCAGACCTCTTCGCGTTATCCGAAATTAGGGCATCGCCAAATTGGGAAACAAGAGCAATGAAGATGTCAC
GGACATGAACGAAGTCACTGTCGGTGAGTTGAAGCGTGGGCTTTATTTTTTTAAGAAATACGTTCTTCAAGCCCTTTAGCCGGAAACCCACCATCTCCCC
GTCTTCATCATAAGTTATTGTCAAAAACTGATCTATACGATCCGAAATTGTAAGGGTATCCCGTTGTACATAGTCGATGTAATCCATGCTGGGGAAATAC
ACGGCTACTTTAGAAAACTCCTTGCCTTCAACGGGCTGGAAGTCCGTCGATTCAACATGTTTTGTCATTACAGCCTCCAAACTTGCACCTTGTATCTGAC
TTCTGCCTCATAAGGAACGGTTGGCGCGTTTTCGTCGTTCTTTACCCATTCCCACGAAAGGATCATACCACTTGAGCCAGCAGATGTCTCTTGCTTATAA
CGACGAACATAGCAAGCGAAAACGGCATTTTTAGGACTTGGGCATGATTTTGCAACGCAAACCATATGCGGTACATACCTATAGAAAGTACTCGGGCTGG
ATATAAAAACATACACCTCTTCTCCATTGTCGGACCCATCAATTGGTCGCTCCAATCCACGGTAAACCGCATGAGAGGCCAGCATACCTTTCAGAACAAC
CTTTCTGCCATCTTCGTGATATCCAATATTGTTTACGGGCGGCGCGCACCCTTTAACACACGTCCAAAAATCCATTAAGGATTGTCGGCGCAAGTGGATT
GCGTTTTGCTTCACCCAAGATGCTGAAACATCAAGCTTCATCATTTCATTTTGATCATCAAAATGAGGTGCCGCAATTGTGTAATCTTCTATCTCAGCGA
AAACCATGCTCGATTATTCCTTGTTGATGGGGTTATCGAGCATTGACTGTTTGTCCATTCTGTGGGACATATGTTGTGTGTTTGCGTTGCTCGACAACGT
GGTTTAGAGGGGGTCCGCTAGAATTAGCGTGACCCCTTCCTTTTGACCATAGGGCATGTGCCGCTCAGAGTCCATAGAAGGGCAACTGGAGTTGCGTCTT
TTAAATTCGGGGAATGGGTAGTCAAAAAAAGAAATCGGCACTGTGCGGGCCTCTCTGGCTCTCATATGGGAAATTGCGAAGTTCCCCATAGCGCTCCGTT
ACGTTCCACCCAGCCTTTGCGCCGCAGATTGTGCAGCGCCTGATACATGCGCCCGCGCGCTTCCTCATAGGTCATATCAGTGACTGATGCGGCATAGAGC
GACACTTCCTTGCCAGTCTTAGGACCGCTGCGCAGAGCGTCCATTGCCAGTATCGACGTATCACGCCTCTGAGCGATCTTGCGGGGAACTGCATGCGCAG
ACAGATCAACACCGCGCATCACAAGCAACGCCTCTACATGCTCCAGACCGTCTAGGCTGTCGCGGATCATCTGCGCTCGAAGGTGCAGCAATGCGTTTGT
GACTGTCTTATCCAACATACCCGCATTGTGATTCACATGGGCGCGAAAATCAGCTAGGCAGCACACTCATTAATTCTTGTTTAGAAGCATAAGTTTGTGA
TTCACTCTCGCACAAAACTGGGCGGGAGAATGCAAATGGCGCGATCAGATATGAGCGATCTGGAATGGGAGTTCATCAAAGCTGTCTTGCCCAACAAAAC
ACGTGGCAAGAAGCGGGTTGATGACCGCCGCGTGATCAACGGCATTTTCTACGTCCTGCGCACCGGCATCCCTTGGGCTGATCTACCAGAGCAATACGGC
CCACCGACCACGGTCTACAACCGCTTCAACCGGTGGAGCTATGCAGGCCACTGGGACCGGATCATGGAGGCCATCGCCGACGCGCATAACGTTGACATGG
TGATGGTCGACGGGACCAGCGTGCGTGCGCATCATTCCGCCACCACGCTCAAAAAAAGACCCACGCCGCTGTTTAGGTCGTTCACGGGGCGGATTAGGGA
CGAAAATACATGCACTTACCAATCAGGATGGGCTGCCGATCCGATATGAATTGACACCCGGTCAAGCCCATGACGCGCCGCCGTGCAAGACGCTACTGGA
CAACTTGCAACCTGGACAACATGTGCTCGCGGATAAAGCATATGACGCAGACTGGATCAGGGATATGATCTGGGAACAGGGGGCTATCGACGTGATCCCT
CCCAAGGCCAACCGTAAACTACCCGCCGAATTTGATGCTGAAATCTACCGGGAACGCAACAAAATCGAGCGCTTCTTTGGCAGGCTGAAAGCCTCGTTCC
GCCGTATCGCAACCCGATACGAGAAGACCTCACGCAATTTCCTGTCGATGATCAAACTGGCATCGATCAGGCTGTGGATCGAGTTTTATGAGTCGGCTGC
CTAGATTGTTGGTGCGTTTGATACATAAGGCCG
Protein section
ORF number : 6
ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
201 bp | 66 aa | 1062 | 862 | - | No |
Annotation : Transcriptional regulator, XRE familyDescription : Transcriptional Regulator factor
ORF sequence :
MKAANLLKAELKRKGVTYAQLVEKLANIGISEKEVNVRNKLSRGKFSAAFMLQCLNAIGSYQLHLD
Blast result :ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
756 bp | 251 aa | 814 | 59 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MGETKAKNAYHTSRYAAHATNQIEQSCLISDLSNFSKCVAEIINSTNEDQRAQDDLEAQTEMALWAFWMLVATVIVALITGLGVIFVWQTLKATQRMATD
TREIGQAQTRAYLSITGAKYFRNGRPGREGHNYVRLTIHNSGNSPARNVNLRVTDVRVEADISVDLFSKPKQIGDIASGDKKNVDILFAEPFEVKGYVSF
TVYVCISSKTVFKNDGVIREFGSVNHRVKTINRENMAVVPIFQITNGNRNA
TREIGQAQTRAYLSITGAKYFRNGRPGREGHNYVRLTIHNSGNSPARNVNLRVTDVRVEADISVDLFSKPKQIGDIASGDKKNVDILFAEPFEVKGYVSF
TVYVCISSKTVFKNDGVIREFGSVNHRVKTINRENMAVVPIFQITNGNRNA
Blast result :ORF 3
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1023 bp | 320 aa | 1189 | 2211 | + | No |
Chemistry : DDE
ORF sequence :
MAQHFLLSAASRTLSLRQIYKAGEDAAYQTFCEMRWSETNGEAVCPRCSNHETYKITTRRKFKCKACAHQFSVTSGTIFASRKMDFVDLLAAICIIVNGA
KGVSMIQLSRDLDCQYKTAFVLAHKLREAMAQEVQTGEVLQGHVEIDGAYFGGHIRPENAKADRKDRRLKAHQTGKRRVVIAMRERTGRTLPVVGMSEAE
GVALANENVCRMATMSADEASHWDELHMGWSVDRVNHSEIYSDHGKHTNMVESYFSRLRRMVTGQHHHVSPQYLYQYANHAAWLEDNRRFDNGELAHRLV
SNAMDAPVSRNWKGYWQRAA
KGVSMIQLSRDLDCQYKTAFVLAHKLREAMAQEVQTGEVLQGHVEIDGAYFGGHIRPENAKADRKDRRLKAHQTGKRRVVIAMRERTGRTLPVVGMSEAE
GVALANENVCRMATMSADEASHWDELHMGWSVDRVNHSEIYSDHGKHTNMVESYFSRLRRMVTGQHHHVSPQYLYQYANHAAWLEDNRRFDNGELAHRLV
SNAMDAPVSRNWKGYWQRAA
Blast result :ORF 4
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
363 bp | 137 aa | 2568 | 2206 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MTKHVESTDFQPVEGKEFSKVAVYFPSMDYIDYVQRDTLTISDRIDQFLTITYDEDGEMVGFRLKGLKNVFLKKIKPTLQLTDSDFVHVRDIFIALVSQF
GDALISDNAKRSAYKKAYKLSESDNVTLDVSEYKMAA
GDALISDNAKRSAYKKAYKLSESDNVTLDVSEYKMAA
Blast result :ORF 5
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
210 bp | 69 aa | 2872 | 2663 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MRFTVDWSDQLMGPTMEKRCMFLYPARVLSIGMYRIWFALQNHAQVLKMPFSLAMFVVISKRHLLAQVV
Blast result :ORF 6
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
240 bp | 118 aa | 4364 | 4603 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MLDKTVTNALLHLRAQMIRDSLDGLEHVEALLVMRGVDLSAHAVPRKIAQRRDTSILAMDALRSGPKTGKEVSLYAASVTDMTYEEARGRMYQALHNLRR
KGWVERNGALWGTSQFPI
KGWVERNGALWGTSQFPI
Blast result :
Comments
The third ORF is the transposase, others are passengers genes.
ISRssp2 is 77% aa similar to ISAusp1.
ISRssp2 is 77% aa similar to ISAusp1.
References
1] Murrell,J.C., Schafer,H., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. (2006) Direct suibmission GenBank.