ISRme10
- Family IS30
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_006466 | ND | Ralstonia metallidurans | Ralstonia metallidurans CH34 plasmid pMOL30 |
DNA section
IS Length : 1529 bp
Ends
IR Length : 15/18
IRL : TCCTTCCTTCAGCCCCTTTAGCATGGCCGGGTCCTTGACCGGGAAAGCCA
IRR : TCCTTCCTGCGTAGCCCCGTCGAGACGGGTTCACCGGGCGCTTACTGTCG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AGACCTGGTC | CGGAAGCAGT | 0 |
DNA sequence
TCCTTCCTTCAGCCCCTTTAGCATGGCCGGGTCCTTGACCGGGAAAGCCATGGTCATGGCAGACATGCCCAGGTTGGCGATGGGACCATGCTTGAGTGTG
ATTTTTCCAGTTGCCGCGTCAATCTTCCGCACTTCCGCGGGCACAGGCTGAGGCGCCTTCTTTGCACCCGCCGACGGCGTCATGTCCATGCCTTCCATCG
TTGCGGCGGTGCCGGGTAGCGCAGCACCTATAGGGGGCGGTCTCTAGAATGAAGTGCAACACCCTGATGTTAGGGTGTTGGGATGGGACAAAGCTACAGT
CAACTGGGTATCGAAGAGCGTAACTGTAGTCATCGCCTGCTAAACGAGGGGTGCAGCCTGCGTCAGGTCGCGAGAGTGGCGGGGCGAAGTCCGTCGACTA
TTTCACGCGAGGTTGCCCGGGCCGGAGGTCATCGTTCCTACGATGCTGCGAGCGCGCAGGGTATGGCGCTGAGAAGGCGTCGACGTGGGCCGCGCAAGCT
GGCAGCAGGCACGGCGCTGCTGAAGCTGGTGAGAGCATGGCTGCGCGTGGGCTATTCACCGCAACAGATTGCAGGCAGACTCCGGCGCATGTATGCCCAC
CAGCCGGAGTTCCATGTGTCCCACGAGACGATCTACTGCGTGATCTACGCCACGCCGCGCGGTGAGCTGCGCCGCGAGCTAATCGGCAGCCTGCGTAAGG
CCCACAAGGAGCGTCGTTCACGGGGCGCGGGGAACGATCGCCGAGGCAAGCTGCAGGATATGCGCTCGATCCACGAGCGGCCCGAGGAGGTGTTCGAGCG
GCTGGTGCCTGGGCATTGGGAAGGCGACCTGATCAAGGGCGCGGGCAATCGCAGCGCAGTGGCGACGCTGGTGGAACGCAAGACGCGCTTCGTGGTGTTG
GCGAAGATGGACGGTTGCGGGGCGGAGGCAGCGCTGGAGGCGTTGACCAAGAAGTTCCGTCGGGTGCCGCTGGCGCTTCGCAAGAGCCTGACCTACGACC
AGGGCAAAGAGATGGCGCATCACGCAGAGCTGACCAGGCGAGTCAGTACCGAAGTGTTCTTTGCCGACCCGCACAGTCCGTGGCAGAGGCCAAGCAACGA
GAACATGAACGGACTGGTTCGGGAGTATCTACCGAAAGGCGACGATCTATCGGTCTTCTCGCAGGGGTACTTGAACGGAGTCCCGAAGGCGCTGAATTAT
CGCCCTCGGGCGGTTCTCGACTTCGCCACTCCCGCCGAAGCCATGGCCGAAGAGATCAACAAATTACGAACTGGTGTTGCATCTCAGACTTGAAACCGCT
GTCACGGCCAGCGCTGCCATCTTCTCGCGTTCCGTACTCACGGCACCCTCCTTAATAAGAGATTCAGGTAGCGAATGCCTGGCCGAATTGCCGGGCCCGC
TTGACGTCATCGGTATGCAAGTAGATGGACGTGGTCGAAATTGAGGCGTGGCGCAGGTTGTCGCGCACAGCGCTCAGTTCGACAGTAAGCGCCCGGTGAA
CCCGTCTCGACGGGGCTACGCAGGAAGGA
ATTTTTCCAGTTGCCGCGTCAATCTTCCGCACTTCCGCGGGCACAGGCTGAGGCGCCTTCTTTGCACCCGCCGACGGCGTCATGTCCATGCCTTCCATCG
TTGCGGCGGTGCCGGGTAGCGCAGCACCTATAGGGGGCGGTCTCTAGAATGAAGTGCAACACCCTGATGTTAGGGTGTTGGGATGGGACAAAGCTACAGT
CAACTGGGTATCGAAGAGCGTAACTGTAGTCATCGCCTGCTAAACGAGGGGTGCAGCCTGCGTCAGGTCGCGAGAGTGGCGGGGCGAAGTCCGTCGACTA
TTTCACGCGAGGTTGCCCGGGCCGGAGGTCATCGTTCCTACGATGCTGCGAGCGCGCAGGGTATGGCGCTGAGAAGGCGTCGACGTGGGCCGCGCAAGCT
GGCAGCAGGCACGGCGCTGCTGAAGCTGGTGAGAGCATGGCTGCGCGTGGGCTATTCACCGCAACAGATTGCAGGCAGACTCCGGCGCATGTATGCCCAC
CAGCCGGAGTTCCATGTGTCCCACGAGACGATCTACTGCGTGATCTACGCCACGCCGCGCGGTGAGCTGCGCCGCGAGCTAATCGGCAGCCTGCGTAAGG
CCCACAAGGAGCGTCGTTCACGGGGCGCGGGGAACGATCGCCGAGGCAAGCTGCAGGATATGCGCTCGATCCACGAGCGGCCCGAGGAGGTGTTCGAGCG
GCTGGTGCCTGGGCATTGGGAAGGCGACCTGATCAAGGGCGCGGGCAATCGCAGCGCAGTGGCGACGCTGGTGGAACGCAAGACGCGCTTCGTGGTGTTG
GCGAAGATGGACGGTTGCGGGGCGGAGGCAGCGCTGGAGGCGTTGACCAAGAAGTTCCGTCGGGTGCCGCTGGCGCTTCGCAAGAGCCTGACCTACGACC
AGGGCAAAGAGATGGCGCATCACGCAGAGCTGACCAGGCGAGTCAGTACCGAAGTGTTCTTTGCCGACCCGCACAGTCCGTGGCAGAGGCCAAGCAACGA
GAACATGAACGGACTGGTTCGGGAGTATCTACCGAAAGGCGACGATCTATCGGTCTTCTCGCAGGGGTACTTGAACGGAGTCCCGAAGGCGCTGAATTAT
CGCCCTCGGGCGGTTCTCGACTTCGCCACTCCCGCCGAAGCCATGGCCGAAGAGATCAACAAATTACGAACTGGTGTTGCATCTCAGACTTGAAACCGCT
GTCACGGCCAGCGCTGCCATCTTCTCGCGTTCCGTACTCACGGCACCCTCCTTAATAAGAGATTCAGGTAGCGAATGCCTGGCCGAATTGCCGGGCCCGC
TTGACGTCATCGGTATGCAAGTAGATGGACGTGGTCGAAATTGAGGCGTGGCGCAGGTTGTCGCGCACAGCGCTCAGTTCGACAGTAAGCGCCCGGTGAA
CCCGTCTCGACGGGGCTACGCAGGAAGGA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1011 bp | 336 aa | 283 | 1293 | + | No |
Chemistry : DDE
ORF sequence :
MGQSYSQLGIEERNCSHRLLNEGCSLRQVARVAGRSPSTISREVARAGGHRSYDAASAQGMALRRRRRGPRKLAAGTALLKLVRAWLRVGYSPQQIAGRL
RRMYAHQPEFHVSHETIYCVIYATPRGELRRELIGSLRKAHKERRSRGAGNDRRGKLQDMRSIHERPEEVFERLVPGHWEGDLIKGAGNRSAVATLVERK
TRFVVLAKMDGCGAEAALEALTKKFRRVPLALRKSLTYDQGKEMAHHAELTRRVSTEVFFADPHSPWQRPSNENMNGLVREYLPKGDDLSVFSQGYLNGV
PKALNYRPRAVLDFATPAEAMAEEINKLRTGVASQT
RRMYAHQPEFHVSHETIYCVIYATPRGELRRELIGSLRKAHKERRSRGAGNDRRGKLQDMRSIHERPEEVFERLVPGHWEGDLIKGAGNRSAVATLVERK
TRFVVLAKMDGCGAEAALEALTKKFRRVPLALRKSLTYDQGKEMAHHAELTRRVSTEVFFADPHSPWQRPSNENMNGLVREYLPKGDDLSVFSQGYLNGV
PKALNYRPRAVLDFATPAEAMAEEINKLRTGVASQT
Blast result :
Comments
ISRme10 is 69% aa similar to IST3091.
References
1] Borremans,B., Hobman,J.L., Provoost,A., Brown,N.L. and van Der Lelie,D.(2001) J. Bacteriol. 183 (19), 5651-5658.