ISLve2
- Family IS5
- Group IS903
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAMS01000001 | ND | Loktanella vestfoldensis | Loktanella vestfoldensis SKA53 |
DNA section
IS Length : 1054 bp
Ends
IR Length : 19/20
IRL : GGCTTTGTTGCACAAATCCTATCATGAGGGGATTCACTGTGTGAATCCAG
IRR : GGCTTTGTTGCACAAACCCTCTTGGGGACGTGTTTCCCCTGACTCCGGAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGCCGGGCGGGG | CGCGGGGTATATCA | 0 |
DNA sequence
GGCTTTGTTGCACAAATCCTATCATGAGGGGATTCACTGTGTGAATCCAGCGTGGTAGCGGGTTGCGATGAGCAGCTGGACACCGACGACGTACAAGACC
CGGAACTGGGCAGAGTACAATCATTGACTTAAGCAGCGGGGATCGCTGTCGATCTGGTTTGATCCAGAGATGTCATGGGAAGCAGAGGCCTCTGGACGCC
GTGGGCGTCAGAAAACCTACAGCGATGCAGCCATCCAAGCCTGTTTGACCCTCAAGGTACTATTCGGCTTGCCCTTGCGGCAGACGACCGGGTTTGTGGA
GAGCTTGCTGAAACGGGTTGAGCTGGACTGGTCGGTGCCGGACTTCAGTACCCTGTGTCGGCGTCAGAAGACGTTGTCCGTCGCCATCCCTTACAAGGGA
TCAGCAGGACCACTTCACCTGCTTGTCGACAGCACAGGCATTAAGGCTGAAGGCGAAGGAGAGTGGAATGCCCGCAAGCATGGCGGTCCAAAGCGCCGCT
TGTGGCGCAAGATCCACATTGGGGTCGATGAGGAAACGCTGGAGATCCGCGCGATCGAGGTGACGAGTAGCAGCATTGGGGACGCCCCGATGCTGCCAGA
CTTGCTCAGCCAGATCCCACCTGATCAGGAGCTTGGCAGCGTCACGGCGGACGGAGCATATGATACACGCAAATGCCATGATGCGATTGCGGCACGCAAT
GCGCACGCCGTCATACCCCCGCGCAAGAACGCTAAGATGTGGAAACCTGACACAGCAGGAGCGAAAGCGCGTAACGAAGCAGTGCGATCCTCAAAGTATC
TGGGTCGTGCTTTGTGGCGAAACCTGACTGGATATCACCGCCGGAGCCGCGTTGAGACAAAAATGCATTGTGTGAAACTACTCGGTCAGCGCCTCTCGGC
GCGGGACTTCGATCGCCAGGTTGCAGAGATCCAGATCCGTGCCGCGATCCTAAACGGCTTCACAGCTATTGGCATACCGCGTACGGTGGCCGTAGGCTAA
ATCCGTCCGGAGTCAGGGGAAACACGTCCCCAAGAGGGTTTGTGCAACAAAGCC
CGGAACTGGGCAGAGTACAATCATTGACTTAAGCAGCGGGGATCGCTGTCGATCTGGTTTGATCCAGAGATGTCATGGGAAGCAGAGGCCTCTGGACGCC
GTGGGCGTCAGAAAACCTACAGCGATGCAGCCATCCAAGCCTGTTTGACCCTCAAGGTACTATTCGGCTTGCCCTTGCGGCAGACGACCGGGTTTGTGGA
GAGCTTGCTGAAACGGGTTGAGCTGGACTGGTCGGTGCCGGACTTCAGTACCCTGTGTCGGCGTCAGAAGACGTTGTCCGTCGCCATCCCTTACAAGGGA
TCAGCAGGACCACTTCACCTGCTTGTCGACAGCACAGGCATTAAGGCTGAAGGCGAAGGAGAGTGGAATGCCCGCAAGCATGGCGGTCCAAAGCGCCGCT
TGTGGCGCAAGATCCACATTGGGGTCGATGAGGAAACGCTGGAGATCCGCGCGATCGAGGTGACGAGTAGCAGCATTGGGGACGCCCCGATGCTGCCAGA
CTTGCTCAGCCAGATCCCACCTGATCAGGAGCTTGGCAGCGTCACGGCGGACGGAGCATATGATACACGCAAATGCCATGATGCGATTGCGGCACGCAAT
GCGCACGCCGTCATACCCCCGCGCAAGAACGCTAAGATGTGGAAACCTGACACAGCAGGAGCGAAAGCGCGTAACGAAGCAGTGCGATCCTCAAAGTATC
TGGGTCGTGCTTTGTGGCGAAACCTGACTGGATATCACCGCCGGAGCCGCGTTGAGACAAAAATGCATTGTGTGAAACTACTCGGTCAGCGCCTCTCGGC
GCGGGACTTCGATCGCCAGGTTGCAGAGATCCAGATCCGTGCCGCGATCCTAAACGGCTTCACAGCTATTGGCATACCGCGTACGGTGGCCGTAGGCTAA
ATCCGTCCGGAGTCAGGGGAAACACGTCCCCAAGAGGGTTTGTGCAACAAAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
831 bp | 276 aa | 170 | 1000 | + | No |
Chemistry : DDE
ORF sequence :
MSWEAEASGRRGRQKTYSDAAIQACLTLKVLFGLPLRQTTGFVESLLKRVELDWSVPDFSTLCRRQKTLSVAIPYKGSAGPLHLLVDSTGIKAEGEGEWN
ARKHGGPKRRLWRKIHIGVDEETLEIRAIEVTSSSIGDAPMLPDLLSQIPPDQELGSVTADGAYDTRKCHDAIAARNAHAVIPPRKNAKMWKPDTAGAKA
RNEAVRSSKYLGRALWRNLTGYHRRSRVETKMHCVKLLGQRLSARDFDRQVAEIQIRAAILNGFTAIGIPRTVAVG
ARKHGGPKRRLWRKIHIGVDEETLEIRAIEVTSSSIGDAPMLPDLLSQIPPDQELGSVTADGAYDTRKCHDAIAARNAHAVIPPRKNAKMWKPDTAGAKA
RNEAVRSSKYLGRALWRNLTGYHRRSRVETKMHCVKLLGQRLSARDFDRQVAEIQIRAAILNGFTAIGIPRTVAVG
Blast result :
Comments
ISLve2 is 89% aa similar to ISRusp1.
References
1] Hagstrom,A., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C. (2006) Direct submission GenBank.