ISBlma7

  • Family ISAs1
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AANZ01000022 ND Blastopirellula marina
Blastopirellula marina DSM 3645
DNA section
IS Length : 1279 bp

Ends


IR Length : 13/18

IRL : CACGGCCAGCGCGCACTTTGGGTAATCTAGCGTAGCGCCTCCGGCTCAAT
IRR : CACGGCTGACGCACACTAACTCCTTCCCAGACCAAGGATTTCAGCCAGGA

Insertion site


Left flankDirect repeatRight flankDR Length
CCAGTATTAAAGTCTACCGGGTCGCCGATAGTTCCTTGGAT0

DNA sequence

CACGGCCAGCGCGCACTTTGGGTAATCTAGCGTAGCGCCTCCGGCTCAATTCTGCGATGATATCGGTTTTCCGATTTCCCGTCACGCGCTGCAGGAAGAG
CCGATGTCTCGCCAGGTCGATCAGGACGATGTCGTTTCGATTCTCGAATACTTTGCGGAGCTGGATGATCCGCGTCGCCATATCAATCGTAAGCATTTGC
TAGGCGACTTGCTCGTCATTTGCGTCCCCGCGGTGATTGCCGGAGCGGATGGGCCGCGGTCGATCGCTATCTGGGCCGAAGCGCATGTCGAGTGGTTGAA
GTCGCGGCTCGAGTTGCCAAGCGGCGTCCCTTCGCACGATACGATCGGTCGCTTGCTCGCGCAGCTCAAGCCGACCGCGTTTCAACAATGCTTTGACGAA
TGGCTGACTGCGATGCGGCAGGCAGCGACAACCGACGATGATGCCCGCGAGATCATTGCGATCGACGGCAAGACGTTGCGACGATCTCATGATCGTGGGA
AAGGACTCGGGCCGCTTTGCCTGGGGAGCGCCTGGGCGGTCAGGGCAGGCGTCAGTCTCGGGCAAATGGCGGCCGCCGACAAGTCGAACGAAATCGTCGT
ATTCCCCGAGCTAATCGAACAAATCGACGTTCGTAAAGCGATCGTCACGCTCGACGCGGCCGGCTGCCAACGGGACGTCGCCGAGAAGATCATCGCCGGC
AAGGGAGACTACGTCCTCGCGCTGAAAGCAAATCAAGAGCGACTGCACGAGCAAGTCCGCGACTACATCACGACGCAGTTGGAAAATGATTTCGCCGGAG
TGAAGGTGGAGCGTCATGAAGAAGAAGCAAAAGGGCACGGCCGCCTCGACAAGCGGTTTTACTATCAGGTGAAGCTGCCAGACGAAGTGCCTGCTGGCGA
AGATTGGCGCGGTTTGAAAACGATCGGCGTCGCGATTCGCATCAGCCAAGAGAATGGACGAGAAACGTGCGATACGAGATATTATATTAGCTCGCTGAAG
CCGGACGCGAAGCAATTCGCCGCCGCCGTTCGCGGCCACTGGGGAATCGAAAACTCGCTTCACTGGACGCTCGACGTAACGTTCCGCGAAGACGAAAGTC
GCCTGAGAAATCGGATCGCAGCGGAGAACCTGGCGTGGCTAAAACGCCTCGCCGTGTCGCTGATCAAACAACACAAAAGCAAGGAAAGCGTCGTCATGCG
AAGACGTATGGCGGGCTGGAACGTGAACTTCCTGGCTGAAATCCTTGGTCTGGGAAGGAGTTAGTGTGCGTCAGCCGTG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1161 bp386 aa1041264+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MSRQVDQDDVVSILEYFAELDDPRRHINRKHLLGDLLVICVPAVIAGADGPRSIAIWAEAHVEWLKSRLELPSGVPSHDTIGRLLAQLKPTAFQQCFDEW
LTAMRQAATTDDDAREIIAIDGKTLRRSHDRGKGLGPLCLGSAWAVRAGVSLGQMAAADKSNEIVVFPELIEQIDVRKAIVTLDAAGCQRDVAEKIIAGK
GDYVLALKANQERLHEQVRDYITTQLENDFAGVKVERHEEEAKGHGRLDKRFYYQVKLPDEVPAGEDWRGLKTIGVAIRISQENGRETCDTRYYISSLKP
DAKQFAAAVRGHWGIENSLHWTLDVTFREDESRLRNRIAAENLAWLKRLAVSLIKQHKSKESVVMRRRMAGWNVNFLAEILGLGRS

 

Blast result :
Comments
ISBlma7 is 60% aa similar to ISAcma2.
References
1] Amann,R., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C.(2006) Dire t submission GenBank