ISBlma7
- Family ISAs1
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AANZ01000022 | ND | Blastopirellula marina | Blastopirellula marina DSM 3645 |
DNA section
IS Length : 1279 bp
Ends
IR Length : 13/18
IRL : CACGGCCAGCGCGCACTTTGGGTAATCTAGCGTAGCGCCTCCGGCTCAAT
IRR : CACGGCTGACGCACACTAACTCCTTCCCAGACCAAGGATTTCAGCCAGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCAGTATTAAAGTCTACCGGG | TCGCCGATAGTTCCTTGGAT | 0 |
DNA sequence
CACGGCCAGCGCGCACTTTGGGTAATCTAGCGTAGCGCCTCCGGCTCAATTCTGCGATGATATCGGTTTTCCGATTTCCCGTCACGCGCTGCAGGAAGAG
CCGATGTCTCGCCAGGTCGATCAGGACGATGTCGTTTCGATTCTCGAATACTTTGCGGAGCTGGATGATCCGCGTCGCCATATCAATCGTAAGCATTTGC
TAGGCGACTTGCTCGTCATTTGCGTCCCCGCGGTGATTGCCGGAGCGGATGGGCCGCGGTCGATCGCTATCTGGGCCGAAGCGCATGTCGAGTGGTTGAA
GTCGCGGCTCGAGTTGCCAAGCGGCGTCCCTTCGCACGATACGATCGGTCGCTTGCTCGCGCAGCTCAAGCCGACCGCGTTTCAACAATGCTTTGACGAA
TGGCTGACTGCGATGCGGCAGGCAGCGACAACCGACGATGATGCCCGCGAGATCATTGCGATCGACGGCAAGACGTTGCGACGATCTCATGATCGTGGGA
AAGGACTCGGGCCGCTTTGCCTGGGGAGCGCCTGGGCGGTCAGGGCAGGCGTCAGTCTCGGGCAAATGGCGGCCGCCGACAAGTCGAACGAAATCGTCGT
ATTCCCCGAGCTAATCGAACAAATCGACGTTCGTAAAGCGATCGTCACGCTCGACGCGGCCGGCTGCCAACGGGACGTCGCCGAGAAGATCATCGCCGGC
AAGGGAGACTACGTCCTCGCGCTGAAAGCAAATCAAGAGCGACTGCACGAGCAAGTCCGCGACTACATCACGACGCAGTTGGAAAATGATTTCGCCGGAG
TGAAGGTGGAGCGTCATGAAGAAGAAGCAAAAGGGCACGGCCGCCTCGACAAGCGGTTTTACTATCAGGTGAAGCTGCCAGACGAAGTGCCTGCTGGCGA
AGATTGGCGCGGTTTGAAAACGATCGGCGTCGCGATTCGCATCAGCCAAGAGAATGGACGAGAAACGTGCGATACGAGATATTATATTAGCTCGCTGAAG
CCGGACGCGAAGCAATTCGCCGCCGCCGTTCGCGGCCACTGGGGAATCGAAAACTCGCTTCACTGGACGCTCGACGTAACGTTCCGCGAAGACGAAAGTC
GCCTGAGAAATCGGATCGCAGCGGAGAACCTGGCGTGGCTAAAACGCCTCGCCGTGTCGCTGATCAAACAACACAAAAGCAAGGAAAGCGTCGTCATGCG
AAGACGTATGGCGGGCTGGAACGTGAACTTCCTGGCTGAAATCCTTGGTCTGGGAAGGAGTTAGTGTGCGTCAGCCGTG
CCGATGTCTCGCCAGGTCGATCAGGACGATGTCGTTTCGATTCTCGAATACTTTGCGGAGCTGGATGATCCGCGTCGCCATATCAATCGTAAGCATTTGC
TAGGCGACTTGCTCGTCATTTGCGTCCCCGCGGTGATTGCCGGAGCGGATGGGCCGCGGTCGATCGCTATCTGGGCCGAAGCGCATGTCGAGTGGTTGAA
GTCGCGGCTCGAGTTGCCAAGCGGCGTCCCTTCGCACGATACGATCGGTCGCTTGCTCGCGCAGCTCAAGCCGACCGCGTTTCAACAATGCTTTGACGAA
TGGCTGACTGCGATGCGGCAGGCAGCGACAACCGACGATGATGCCCGCGAGATCATTGCGATCGACGGCAAGACGTTGCGACGATCTCATGATCGTGGGA
AAGGACTCGGGCCGCTTTGCCTGGGGAGCGCCTGGGCGGTCAGGGCAGGCGTCAGTCTCGGGCAAATGGCGGCCGCCGACAAGTCGAACGAAATCGTCGT
ATTCCCCGAGCTAATCGAACAAATCGACGTTCGTAAAGCGATCGTCACGCTCGACGCGGCCGGCTGCCAACGGGACGTCGCCGAGAAGATCATCGCCGGC
AAGGGAGACTACGTCCTCGCGCTGAAAGCAAATCAAGAGCGACTGCACGAGCAAGTCCGCGACTACATCACGACGCAGTTGGAAAATGATTTCGCCGGAG
TGAAGGTGGAGCGTCATGAAGAAGAAGCAAAAGGGCACGGCCGCCTCGACAAGCGGTTTTACTATCAGGTGAAGCTGCCAGACGAAGTGCCTGCTGGCGA
AGATTGGCGCGGTTTGAAAACGATCGGCGTCGCGATTCGCATCAGCCAAGAGAATGGACGAGAAACGTGCGATACGAGATATTATATTAGCTCGCTGAAG
CCGGACGCGAAGCAATTCGCCGCCGCCGTTCGCGGCCACTGGGGAATCGAAAACTCGCTTCACTGGACGCTCGACGTAACGTTCCGCGAAGACGAAAGTC
GCCTGAGAAATCGGATCGCAGCGGAGAACCTGGCGTGGCTAAAACGCCTCGCCGTGTCGCTGATCAAACAACACAAAAGCAAGGAAAGCGTCGTCATGCG
AAGACGTATGGCGGGCTGGAACGTGAACTTCCTGGCTGAAATCCTTGGTCTGGGAAGGAGTTAGTGTGCGTCAGCCGTG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1161 bp | 386 aa | 104 | 1264 | + | No |
Chemistry : Unknow
ORF sequence :
MSRQVDQDDVVSILEYFAELDDPRRHINRKHLLGDLLVICVPAVIAGADGPRSIAIWAEAHVEWLKSRLELPSGVPSHDTIGRLLAQLKPTAFQQCFDEW
LTAMRQAATTDDDAREIIAIDGKTLRRSHDRGKGLGPLCLGSAWAVRAGVSLGQMAAADKSNEIVVFPELIEQIDVRKAIVTLDAAGCQRDVAEKIIAGK
GDYVLALKANQERLHEQVRDYITTQLENDFAGVKVERHEEEAKGHGRLDKRFYYQVKLPDEVPAGEDWRGLKTIGVAIRISQENGRETCDTRYYISSLKP
DAKQFAAAVRGHWGIENSLHWTLDVTFREDESRLRNRIAAENLAWLKRLAVSLIKQHKSKESVVMRRRMAGWNVNFLAEILGLGRS
LTAMRQAATTDDDAREIIAIDGKTLRRSHDRGKGLGPLCLGSAWAVRAGVSLGQMAAADKSNEIVVFPELIEQIDVRKAIVTLDAAGCQRDVAEKIIAGK
GDYVLALKANQERLHEQVRDYITTQLENDFAGVKVERHEEEAKGHGRLDKRFYYQVKLPDEVPAGEDWRGLKTIGVAIRISQENGRETCDTRYYISSLKP
DAKQFAAAVRGHWGIENSLHWTLDVTFREDESRLRNRIAAENLAWLKRLAVSLIKQHKSKESVVMRRRMAGWNVNFLAEILGLGRS
Blast result :
Comments
ISBlma7 is 60% aa similar to ISAcma2.
References
1] Amann,R., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C.(2006) Dire t submission GenBank