ISStac1

  • Family IS110
  • Group IS1111
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
EF397638 ND Streptomyces aculeolatus
Streptomyces aculeolatus
DNA section
IS Length : 1484 bp

Ends


IR Length : 9/11

IRL : cccccgtTATGTTCTTCGCGGTCCTGCAGGAGGGCCGCTGGCCTCTGGGC
IRR : ----ctcTATGTCTTTCGTCAAGCGAGGCGTGGGGTTCTGGGTTCGTAGA

Insertion site


Left flankDirect repeatRight flankDR Length
CCGCCGCCAGGTCGATGTGCACCCCCCCCGGCTCCA0

DNA sequence

CCCCCGTTATGTTCTTCGCGGTCCTGCAGGAGGGCCGCTGGCCTCTGGGCCCGGTATTGCTGGTCCCCCCTGTCGAACGGATGACCTGGGGGGTGGTGTC
ACCGGGCCTGGGAGGCGTCGTTGGAGACGCTGATGAGAGGTCCGACTACCGCCTGGCCTGGTGCAACGCCCGGCCGCTTGAGGGCGGGAGGTCTGCATAA
CGTCGATGCGCGCACGACGCCAACGCCCAAGCCAGCACACCCGACATGCGTCCGGGAGGACGGCGTGAACGACAACGACGCGATAGGTGTCTTCCTCGGC
CTGGACGTCGGCAAGAGCGCCCACCACGGGCACGGCCTCACCCCTGCCGGCAAGAAGGTCTTCGACAAGCAGCTGCCCAACACCGAACCGAAGCTGCGGG
ACGTCTTCACCAAGCTGACTACCAAGTTCGTCGGCATGGTCCTGGTGATCGTGGACCAGCCGGCCTCGATCGGCGCCCTGCCCCTGACGGTCGCCCGCGA
GACGGGCTGCAAGGTTGCCTACCTGCCCGGACTGGCCATGCGGCGGATCGCCGATCTCTACCCCGGCGAGGCGAAGACCGACGCGAAAGACGCCGCGATC
ATCGCCGACGCGGCCCGCACGATGCCGCAGACCCTGCGTTCGCTTCAGCTGACCGACGAGATCACCGCCGAACTGACCGTCCTGGTCGGCTTCGACCAGG
ACCTCGCCGCCGAGGCCACCCGCACCTCCAACCGCATCCGCGGCCTGCTCACCCAGTTCCACCCGTCCCTGGAGCGCGTCCTTGGCCCGCGTCTGGACCA
CCAGGCCGTCACCTGGCTGCTGGAACGCTACGGATCCCCGGCAGCCCTACGGAAAGCCGGCCGCCGCAGGCTCGTCGAGGTGATCCGGCCCAGGGCTCCC
CGGATGGCCAACCGACTGGTCGACGACATCTTCGAGGCCCTCAACGGGCAGACCGTCGTCGTTCCGGGCACCAGCACGCTGGACATCGTGATCCCCTCGC
TGGCCCGCTCGCTCGGCGCCGTCCACGAACAGCGACGGGCGACCGAAGCCCAGATCACAACCCTGCTGGAGGACCACCCTCTTTCGAAGGTCCTGACGTC
GCTGCCCGGCGTCGGCGTCAGGACCGCCGCCACCCTGCTGGTCACCGTCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTGGCCTCCTGCGCCGGC
CTCGCCCCGACCACGAAATCGTCCGGAACCTCGATCCACGGCGAACACGCACCGCGAGGCGGCAACCGGCAGCTCAAACGCGCGATGTTCCTGTCCGCGT
TCGCCGCCCTGCACGACCCCGCCTCCCGCACCTGCTACGACAAGTGCCGGGTCAGAGGAAAGACCCACACCCAGGCCCTCCTCCGCCTGGCCCGCCAGCG
CATCAACGTGCTGTTCGCGATGCTCCGCGACGGCACCTTCTACGAACCCAGAACCCCACGCCTCGCTTGACGAAAGACATAGAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1338 bp445 aa1331470+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MRGPTTAWPGATPGRLRAGGLHNVDARTTPTPKPAHPTCVREDGVNDNDAIGVFLGLDVGKSAHHGHGLTPAGKKVFDKQLPNTEPKLRDVFTKLTTKFV
GMVLVIVDQPASIGALPLTVARETGCKVAYLPGLAMRRIADLYPGEAKTDAKDAAIIADAARTMPQTLRSLQLTDEITAELTVLVGFDQDLAAEATRTSN
RIRGLLTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVEVIRPRAPRMANRLVDDIFEALNGQTVVVPGTSTLDIVIPSLARSLGAVHEQ
RRATEAQITTLLEDHPLSKVLTSLPGVGVRTAATLLVTVGDGTSFPTAAHLASCAGLAPTTKSSGTSIHGEHAPRGGNRQLKRAMFLSAFAALHDPASRT
CYDKCRVRGKTHTQALLRLARQRINVLFAMLRDGTFYEPRTPRLA

 

Blast result :
Comments
ISStac1 is 92% aa similar to IS110.
References
1] Winter,J.M., Moffitt,M.C., Zazopoulos,E., McAlpine,J.B., Dorrestein,P.C. and Moore,B.S. (2007) J. Biol. Chem. 282 (22), 16362-16368.