ISStac1
- Family IS110
- Group IS1111
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
EF397638 | ND | Streptomyces aculeolatus | Streptomyces aculeolatus |
DNA section
IS Length : 1484 bp
Ends
IR Length : 9/11
IRL : cccccgtTATGTTCTTCGCGGTCCTGCAGGAGGGCCGCTGGCCTCTGGGC
IRR : ----ctcTATGTCTTTCGTCAAGCGAGGCGTGGGGTTCTGGGTTCGTAGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCGCCGCCAGGTCGATGT | GCACCCCCCCCGGCTCCA | 0 |
DNA sequence
CCCCCGTTATGTTCTTCGCGGTCCTGCAGGAGGGCCGCTGGCCTCTGGGCCCGGTATTGCTGGTCCCCCCTGTCGAACGGATGACCTGGGGGGTGGTGTC
ACCGGGCCTGGGAGGCGTCGTTGGAGACGCTGATGAGAGGTCCGACTACCGCCTGGCCTGGTGCAACGCCCGGCCGCTTGAGGGCGGGAGGTCTGCATAA
CGTCGATGCGCGCACGACGCCAACGCCCAAGCCAGCACACCCGACATGCGTCCGGGAGGACGGCGTGAACGACAACGACGCGATAGGTGTCTTCCTCGGC
CTGGACGTCGGCAAGAGCGCCCACCACGGGCACGGCCTCACCCCTGCCGGCAAGAAGGTCTTCGACAAGCAGCTGCCCAACACCGAACCGAAGCTGCGGG
ACGTCTTCACCAAGCTGACTACCAAGTTCGTCGGCATGGTCCTGGTGATCGTGGACCAGCCGGCCTCGATCGGCGCCCTGCCCCTGACGGTCGCCCGCGA
GACGGGCTGCAAGGTTGCCTACCTGCCCGGACTGGCCATGCGGCGGATCGCCGATCTCTACCCCGGCGAGGCGAAGACCGACGCGAAAGACGCCGCGATC
ATCGCCGACGCGGCCCGCACGATGCCGCAGACCCTGCGTTCGCTTCAGCTGACCGACGAGATCACCGCCGAACTGACCGTCCTGGTCGGCTTCGACCAGG
ACCTCGCCGCCGAGGCCACCCGCACCTCCAACCGCATCCGCGGCCTGCTCACCCAGTTCCACCCGTCCCTGGAGCGCGTCCTTGGCCCGCGTCTGGACCA
CCAGGCCGTCACCTGGCTGCTGGAACGCTACGGATCCCCGGCAGCCCTACGGAAAGCCGGCCGCCGCAGGCTCGTCGAGGTGATCCGGCCCAGGGCTCCC
CGGATGGCCAACCGACTGGTCGACGACATCTTCGAGGCCCTCAACGGGCAGACCGTCGTCGTTCCGGGCACCAGCACGCTGGACATCGTGATCCCCTCGC
TGGCCCGCTCGCTCGGCGCCGTCCACGAACAGCGACGGGCGACCGAAGCCCAGATCACAACCCTGCTGGAGGACCACCCTCTTTCGAAGGTCCTGACGTC
GCTGCCCGGCGTCGGCGTCAGGACCGCCGCCACCCTGCTGGTCACCGTCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTGGCCTCCTGCGCCGGC
CTCGCCCCGACCACGAAATCGTCCGGAACCTCGATCCACGGCGAACACGCACCGCGAGGCGGCAACCGGCAGCTCAAACGCGCGATGTTCCTGTCCGCGT
TCGCCGCCCTGCACGACCCCGCCTCCCGCACCTGCTACGACAAGTGCCGGGTCAGAGGAAAGACCCACACCCAGGCCCTCCTCCGCCTGGCCCGCCAGCG
CATCAACGTGCTGTTCGCGATGCTCCGCGACGGCACCTTCTACGAACCCAGAACCCCACGCCTCGCTTGACGAAAGACATAGAG
ACCGGGCCTGGGAGGCGTCGTTGGAGACGCTGATGAGAGGTCCGACTACCGCCTGGCCTGGTGCAACGCCCGGCCGCTTGAGGGCGGGAGGTCTGCATAA
CGTCGATGCGCGCACGACGCCAACGCCCAAGCCAGCACACCCGACATGCGTCCGGGAGGACGGCGTGAACGACAACGACGCGATAGGTGTCTTCCTCGGC
CTGGACGTCGGCAAGAGCGCCCACCACGGGCACGGCCTCACCCCTGCCGGCAAGAAGGTCTTCGACAAGCAGCTGCCCAACACCGAACCGAAGCTGCGGG
ACGTCTTCACCAAGCTGACTACCAAGTTCGTCGGCATGGTCCTGGTGATCGTGGACCAGCCGGCCTCGATCGGCGCCCTGCCCCTGACGGTCGCCCGCGA
GACGGGCTGCAAGGTTGCCTACCTGCCCGGACTGGCCATGCGGCGGATCGCCGATCTCTACCCCGGCGAGGCGAAGACCGACGCGAAAGACGCCGCGATC
ATCGCCGACGCGGCCCGCACGATGCCGCAGACCCTGCGTTCGCTTCAGCTGACCGACGAGATCACCGCCGAACTGACCGTCCTGGTCGGCTTCGACCAGG
ACCTCGCCGCCGAGGCCACCCGCACCTCCAACCGCATCCGCGGCCTGCTCACCCAGTTCCACCCGTCCCTGGAGCGCGTCCTTGGCCCGCGTCTGGACCA
CCAGGCCGTCACCTGGCTGCTGGAACGCTACGGATCCCCGGCAGCCCTACGGAAAGCCGGCCGCCGCAGGCTCGTCGAGGTGATCCGGCCCAGGGCTCCC
CGGATGGCCAACCGACTGGTCGACGACATCTTCGAGGCCCTCAACGGGCAGACCGTCGTCGTTCCGGGCACCAGCACGCTGGACATCGTGATCCCCTCGC
TGGCCCGCTCGCTCGGCGCCGTCCACGAACAGCGACGGGCGACCGAAGCCCAGATCACAACCCTGCTGGAGGACCACCCTCTTTCGAAGGTCCTGACGTC
GCTGCCCGGCGTCGGCGTCAGGACCGCCGCCACCCTGCTGGTCACCGTCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTGGCCTCCTGCGCCGGC
CTCGCCCCGACCACGAAATCGTCCGGAACCTCGATCCACGGCGAACACGCACCGCGAGGCGGCAACCGGCAGCTCAAACGCGCGATGTTCCTGTCCGCGT
TCGCCGCCCTGCACGACCCCGCCTCCCGCACCTGCTACGACAAGTGCCGGGTCAGAGGAAAGACCCACACCCAGGCCCTCCTCCGCCTGGCCCGCCAGCG
CATCAACGTGCTGTTCGCGATGCTCCGCGACGGCACCTTCTACGAACCCAGAACCCCACGCCTCGCTTGACGAAAGACATAGAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1338 bp | 445 aa | 133 | 1470 | + | No |
Chemistry : DEDD
ORF sequence :
MRGPTTAWPGATPGRLRAGGLHNVDARTTPTPKPAHPTCVREDGVNDNDAIGVFLGLDVGKSAHHGHGLTPAGKKVFDKQLPNTEPKLRDVFTKLTTKFV
GMVLVIVDQPASIGALPLTVARETGCKVAYLPGLAMRRIADLYPGEAKTDAKDAAIIADAARTMPQTLRSLQLTDEITAELTVLVGFDQDLAAEATRTSN
RIRGLLTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVEVIRPRAPRMANRLVDDIFEALNGQTVVVPGTSTLDIVIPSLARSLGAVHEQ
RRATEAQITTLLEDHPLSKVLTSLPGVGVRTAATLLVTVGDGTSFPTAAHLASCAGLAPTTKSSGTSIHGEHAPRGGNRQLKRAMFLSAFAALHDPASRT
CYDKCRVRGKTHTQALLRLARQRINVLFAMLRDGTFYEPRTPRLA
GMVLVIVDQPASIGALPLTVARETGCKVAYLPGLAMRRIADLYPGEAKTDAKDAAIIADAARTMPQTLRSLQLTDEITAELTVLVGFDQDLAAEATRTSN
RIRGLLTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVEVIRPRAPRMANRLVDDIFEALNGQTVVVPGTSTLDIVIPSLARSLGAVHEQ
RRATEAQITTLLEDHPLSKVLTSLPGVGVRTAATLLVTVGDGTSFPTAAHLASCAGLAPTTKSSGTSIHGEHAPRGGNRQLKRAMFLSAFAALHDPASRT
CYDKCRVRGKTHTQALLRLARQRINVLFAMLRDGTFYEPRTPRLA
Blast result :
Comments
ISStac1 is 92% aa similar to IS110.
References
1] Winter,J.M., Moffitt,M.C., Zazopoulos,E., McAlpine,J.B., Dorrestein,P.C. and Moore,B.S. (2007) J. Biol. Chem. 282 (22), 16362-16368.