ISBwe2
- Family IS6
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010180 | ND | Bacillus weihenstephanensis | Bacillus weihenstephanensis KBAB4 plasmid pBWB401 |
DNA section
IS Length : 863 bp
Ends
IR Length : 16
IRL : GGTTCTGGTGCAAAAACTTCAGGACAATTGCAATAAATCTACAAATCTTG
IRR : GGTTCTGGTGCAAAAATAGAATAAAAGATAATAAAGCGCATAGATTCCTA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTGTCCATATGGACAGCTTATTAGCGTG | GTATTTTTCACCTTTAATTTTTGGTTTCT | 0 |
DNA sequence
GGTTCTGGTGCAAAAACTTCAGGACAATTGCAATAAATCTACAAATCTTGGACATACTGATACTACTAATCTAAAGAAGTTGCGTGATTGGTATGGAAAA
GGAAAATTTATTCAAATGGAAACATTATCAGCCTGATATTATTTTGTTAACGGTAAGATGGTACCTACGGTACAACCTCAGTTTTCGTGATTTAGTGGAA
ATGATGGAGGAACGGGGCTTATCCATTTCTCATACAACGATTATGCGTTGGGTTCATCAGTACGGTCCTGAATTGGACAAACGAATCCGAAGTCACCTTA
AACAAACAAATGACTCCTGGAGAGTCGATGAAACATATATCAAAGTAAAAGGTCAATGGATGTACCTGTATCGTGCTGTTGATTCAAAAGGAAATACAAT
CGATTTTTACCTAAGCAAAACAAGAGACCAGAAGGCTGCAAAGCACTATTTCAAGAAGGCCTTGCAGTCTTTTCATGTTTCAAAACCTCGTGTTATAACA
GTCGATAAAAATCCAGATTATCCTATTGCAATTGAACAGTTGAAAAAAGAAAAAAGCATACCTGGTGGTATGCGACTTAGACAACAAAAGTACTTGAATA
ACATAGTAGAACAAGATCATCGTTTTATAAAGAAGCGAATTCGTTCTATGCTAGGGTTCAAATGTTTTGACACAGCTACATCCATTCTTTCTGGAGTAGA
AGTCATGCATATGATTAAAAAAGAACAGGTTGATTTACGGGACCAGTCTGTCCAAAATCAAAAAGAATTCATCCATCAATTGTTTGGGCTTGCGGCATAA
GATACGATTCCGTTAGGAATCTATGCGCTTTATTATCTTTTATTCTATTTTTGCACCAGAACC
GGAAAATTTATTCAAATGGAAACATTATCAGCCTGATATTATTTTGTTAACGGTAAGATGGTACCTACGGTACAACCTCAGTTTTCGTGATTTAGTGGAA
ATGATGGAGGAACGGGGCTTATCCATTTCTCATACAACGATTATGCGTTGGGTTCATCAGTACGGTCCTGAATTGGACAAACGAATCCGAAGTCACCTTA
AACAAACAAATGACTCCTGGAGAGTCGATGAAACATATATCAAAGTAAAAGGTCAATGGATGTACCTGTATCGTGCTGTTGATTCAAAAGGAAATACAAT
CGATTTTTACCTAAGCAAAACAAGAGACCAGAAGGCTGCAAAGCACTATTTCAAGAAGGCCTTGCAGTCTTTTCATGTTTCAAAACCTCGTGTTATAACA
GTCGATAAAAATCCAGATTATCCTATTGCAATTGAACAGTTGAAAAAAGAAAAAAGCATACCTGGTGGTATGCGACTTAGACAACAAAAGTACTTGAATA
ACATAGTAGAACAAGATCATCGTTTTATAAAGAAGCGAATTCGTTCTATGCTAGGGTTCAAATGTTTTGACACAGCTACATCCATTCTTTCTGGAGTAGA
AGTCATGCATATGATTAAAAAAGAACAGGTTGATTTACGGGACCAGTCTGTCCAAAATCAAAAAGAATTCATCCATCAATTGTTTGGGCTTGCGGCATAA
GATACGATTCCGTTAGGAATCTATGCGCTTTATTATCTTTTATTCTATTTTTGCACCAGAACC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
708 bp | 235 aa | 93 | 800 | + | No |
Chemistry : DDE
ORF sequence :
MEKENLFKWKHYQPDIILLTVRWYLRYNLSFRDLVEMMEERGLSISHTTIMRWVHQYGPELDKRIRSHLKQTNDSWRVDETYIKVKGQWMYLYRAVDSKG
NTIDFYLSKTRDQKAAKHYFKKALQSFHVSKPRVITVDKNPDYPIAIEQLKKEKSIPGGMRLRQQKYLNNIVEQDHRFIKKRIRSMLGFKCFDTATSILS
GVEVMHMIKKEQVDLRDQSVQNQKEFIHQLFGLAA
NTIDFYLSKTRDQKAAKHYFKKALQSFHVSKPRVITVDKNPDYPIAIEQLKKEKSIPGGMRLRQQKYLNNIVEQDHRFIKKRIRSMLGFKCFDTATSILS
GVEVMHMIKKEQVDLRDQSVQNQKEFIHQLFGLAA
Blast result :
Comments
ISBwe2 is 92% aa similar to IS240C
References
1] Lapidus,A., Goltsman,E., Copeland,A., Lucas,S., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Bruce,D., Pitluck,S., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Richardson,P., Auger,S., Galleron,N., Sanchis,V., Gohar,M., Broussole,V., Brillard,J., Guinebretiere,M.-H., Ehrlich,S.D., Lereclus,D., Aymerich,S., Nguen-the,C. and Sorokin,A. (2007) Direct submission GenBank.
2] ISfinder annotation (2008).
2] ISfinder annotation (2008).