ISGur14
- Family IS701
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_009483 | ND | Geobacter uraniumreducens | Geobacter uraniumreducens Rf4 |
DNA section
IS Length : 1529 bp
Ends
IR Length : 22/23
IRL : TATTAATACTACTCCGACACATAGCTTGATATAATCTGTTTCATGTGATA
IRR : AATTAATACTACTCCGACACATATAGTTCTTTAACATTTCAATATTCGCA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| GATTTTGTGAT | CAA | ATCGCATAAT | 3 |
DNA sequence
TATTAATACTACTCCGACACATAGCTTGATATAATCTGTTTCATGTGATAATCTCTGCGAATGACAACAGAGATCGTTTTCCCCGGCATCGAAGAATATA
TGGCTCCCTATTATGGCTATTTCCATCGGTCAGAGAGCCGTGAACTGGCAGAATGTTACTTGGCCGGCCTGCTCATGGACGGTGAGCGCAAGTCAGTTGA
ACCCATGTCAGAGAAGGTAAACGCATCTGAACGAAGTATGCAGCGCCTCCTTTCGACTGCCAAATGGGACGATCAACTTGTTGCTGAGCAATTCCGCCGT
TCCATGCTTGACGTCACTTCCGACCCGCAGGGGATCCTGGTTCTTGATGATACCGGGTTCCCTAAGAAAGGGTACGACAGTGTATGTGTTGCCCGGCAAT
ACTGCGGTGCATCAGGCAAGACTGACAACTGTCAGATTGGCGTAAGCATGACGTATGTCGGCAGAGATGTCGCCTGGCCATATGCCATGGAACTGTTCGT
CCCGGAATCCTGGGATCAGCAAAATGATGATTGCACCGCAAAGCGTAAAAAGGCTCACATGCCGGAGTCAGTGCACCATAAGTCAAAATGGCGCATGGCA
CTTGATTTTGTTGACCTGGCCCGAAAAGACAATGTTCCCCATCGTGCAGTCCTTGCTGACAGCTGGTATGGCAACATTCCGGAGTTTCGCAAGGAGCTTG
AGTCCCGCAGTGAAAATTACATCCTGGGAGCTTACTCCAACACCCCGGTATTTCTTGAGGAGCCGGTCTTTGAAATTGCGCCAGTCAAAGAGCATAAGCG
AGGGCGTCCACGAACTCGCCCTAAGGTAGTCTCCACAAACCCCGAACCGGTCAAGCTGTCGGTACTGGGCGAAAGCATTGCCGATGATGCATGGCAACGG
CTAGAATTGAGGCTCAATTCCAAGGACAAGCCACTTGTTGCAGAGGCCGTCTCAATGAGAGTGTGGCCGGCTCACGGATGGCGGCAGGGCAATCATCATG
AACAAGTCTGGCTCCTGATAGAGCGCCGCCCCCTGAACCTGGGTGGATACGAGCTTCGCTATTTCTTCAGCAATATGCCGCAGCATCTGGCAACGATTGA
CCTTGCCCGCCTCTACCATGAACGTTATTGGATAGAGCATGGCTATCAACAGCTAAAGGAAGAGCTTGGCCTTGATCACCATGAAGGGCGCTCATGGAGC
GGATGGCATCGACATGTGCTCCTGACGTCCCTGGCATATGGCTATCTGACACTGTTGCGTTTGCAGCAAAAAAAACAGAAGAGTGCGACAGCGCGGAGCA
ACTGGATTCAGAAAAAATCGACACTGGCCAACGACGCTTTGTTCTGAAAACCAAACACCTGGAAAAGTGGCGCCATCGTTGCTGTTCTCTTCGTTCCTCT
GAGCGATGGAGGCGGAGGCAACGACTCAAAGGCATGCCGTCCTTGCCTGACATCAGGCATCAGATTGCAAAGCTTCTGGTGCGAATATTGAAATGTTAAA
GAACTATATGTGTCGGAGTAGTATTAATT
TGGCTCCCTATTATGGCTATTTCCATCGGTCAGAGAGCCGTGAACTGGCAGAATGTTACTTGGCCGGCCTGCTCATGGACGGTGAGCGCAAGTCAGTTGA
ACCCATGTCAGAGAAGGTAAACGCATCTGAACGAAGTATGCAGCGCCTCCTTTCGACTGCCAAATGGGACGATCAACTTGTTGCTGAGCAATTCCGCCGT
TCCATGCTTGACGTCACTTCCGACCCGCAGGGGATCCTGGTTCTTGATGATACCGGGTTCCCTAAGAAAGGGTACGACAGTGTATGTGTTGCCCGGCAAT
ACTGCGGTGCATCAGGCAAGACTGACAACTGTCAGATTGGCGTAAGCATGACGTATGTCGGCAGAGATGTCGCCTGGCCATATGCCATGGAACTGTTCGT
CCCGGAATCCTGGGATCAGCAAAATGATGATTGCACCGCAAAGCGTAAAAAGGCTCACATGCCGGAGTCAGTGCACCATAAGTCAAAATGGCGCATGGCA
CTTGATTTTGTTGACCTGGCCCGAAAAGACAATGTTCCCCATCGTGCAGTCCTTGCTGACAGCTGGTATGGCAACATTCCGGAGTTTCGCAAGGAGCTTG
AGTCCCGCAGTGAAAATTACATCCTGGGAGCTTACTCCAACACCCCGGTATTTCTTGAGGAGCCGGTCTTTGAAATTGCGCCAGTCAAAGAGCATAAGCG
AGGGCGTCCACGAACTCGCCCTAAGGTAGTCTCCACAAACCCCGAACCGGTCAAGCTGTCGGTACTGGGCGAAAGCATTGCCGATGATGCATGGCAACGG
CTAGAATTGAGGCTCAATTCCAAGGACAAGCCACTTGTTGCAGAGGCCGTCTCAATGAGAGTGTGGCCGGCTCACGGATGGCGGCAGGGCAATCATCATG
AACAAGTCTGGCTCCTGATAGAGCGCCGCCCCCTGAACCTGGGTGGATACGAGCTTCGCTATTTCTTCAGCAATATGCCGCAGCATCTGGCAACGATTGA
CCTTGCCCGCCTCTACCATGAACGTTATTGGATAGAGCATGGCTATCAACAGCTAAAGGAAGAGCTTGGCCTTGATCACCATGAAGGGCGCTCATGGAGC
GGATGGCATCGACATGTGCTCCTGACGTCCCTGGCATATGGCTATCTGACACTGTTGCGTTTGCAGCAAAAAAAACAGAAGAGTGCGACAGCGCGGAGCA
ACTGGATTCAGAAAAAATCGACACTGGCCAACGACGCTTTGTTCTGAAAACCAAACACCTGGAAAAGTGGCGCCATCGTTGCTGTTCTCTTCGTTCCTCT
GAGCGATGGAGGCGGAGGCAACGACTCAAAGGCATGCCGTCCTTGCCTGACATCAGGCATCAGATTGCAAAGCTTCTGGTGCGAATATTGAAATGTTAAA
GAACTATATGTGTCGGAGTAGTATTAATT
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1287 bp | 428 aa | 61 | 1347 | + | No |
Chemistry : DDE
ORF sequence :
MTTEIVFPGIEEYMAPYYGYFHRSESRELAECYLAGLLMDGERKSVEPMSEKVNASERSMQRLLSTAKWDDQLVAEQFRRSMLDVTSDPQGILVLDDTGF
PKKGYDSVCVARQYCGASGKTDNCQIGVSMTYVGRDVAWPYAMELFVPESWDQQNDDCTAKRKKAHMPESVHHKSKWRMALDFVDLARKDNVPHRAVLAD
SWYGNIPEFRKELESRSENYILGAYSNTPVFLEEPVFEIAPVKEHKRGRPRTRPKVVSTNPEPVKLSVLGESIADDAWQRLELRLNSKDKPLVAEAVSMR
VWPAHGWRQGNHHEQVWLLIERRPLNLGGYELRYFFSNMPQHLATIDLARLYHERYWIEHGYQQLKEELGLDHHEGRSWSGWHRHVLLTSLAYGYLTLLR
LQQKKQKSATARSNWIQKKSTLANDALF
PKKGYDSVCVARQYCGASGKTDNCQIGVSMTYVGRDVAWPYAMELFVPESWDQQNDDCTAKRKKAHMPESVHHKSKWRMALDFVDLARKDNVPHRAVLAD
SWYGNIPEFRKELESRSENYILGAYSNTPVFLEEPVFEIAPVKEHKRGRPRTRPKVVSTNPEPVKLSVLGESIADDAWQRLELRLNSKDKPLVAEAVSMR
VWPAHGWRQGNHHEQVWLLIERRPLNLGGYELRYFFSNMPQHLATIDLARLYHERYWIEHGYQQLKEELGLDHHEGRSWSGWHRHVLLTSLAYGYLTLLR
LQQKKQKSATARSNWIQKKSTLANDALF
Blast result :
Comments
ISGur14 is 52 % (ORF) aa similar to ISXo15.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavinadel Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,Chertkov,O., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F.,Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Shelobolina,E.,Aklujkar,M., Lovley,D. and Richardson,P. (2007) Direct submission GenBank.