ISGur7
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_009483 | ND | Geobacter uraniumreducens | Geobacter uraniumreducens Rf4 |
DNA section
IS Length : 1342 bp
Ends
IR Length : 20/26
IRL : GGCTCCTCGACGAATTGAGTGGGTAGCCTGGGCCGGGTTGATGTAAGATA
IRR : GGCTCTGCAACGAATCAAGTGGGTAGAGGGAATAGCGACTTTAGGTTGAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAGGGTCCAT | TTCTTCGC | GATGTTTCTC | 8 |
DNA sequence
GGCTCCTCGACGAATTGAGTGGGTAGCCTGGGCCGGGTTGATGTAAGATAGGCCACCATCACTCAGCCTGGAGGTTAGTAATCGCTATGAATCCTGAAGA
TCTTTTTGGTGCTGCTCTTGGAATTGCCATCCCGTGGAAGGTTACCTCTGTTGACTTCAACAAGAAGTCAAGTCGTTTGGACATAACCATCGACTTCCAG
CGGGGAGCCACCTTTCCCTGTCCGGTCTGCGGAACGTTGTCACCAGTCCATGACACCACGGAGAAAGAGTGGCGGCATCTGAATTTCTTCCAGTACGAAG
CCTACCTTCATGCGCGTGTTCCACGGGTAAAGTGCCCTAACAGCGACTGCGGCGTGAAGTTGGTCCAGGTACCCTGGGCTCGCGCAGGCTCAGGATTTAC
GCTGCTGTTTGAGGCCCTGGCCATGACCATGGCTCGTGATTTGCCGGTGAAGGTCATGAGCAGGCTGTTTGCCGTTACCGATACCCGTCTATGGCGGTTG
ATTCAATCCTATGTCGAGAAGGCAAGGGCCGCAGAAGACTTCTCCGAGGTGAAGAGGGTCGGTGCGGATGAAACCTTTGCCGGGCGCAGTCATGACGAGA
AATTCGTCACCTTCTTCTTCGACCTCGACATGCATAAGCTCTTGTTCGGCACGACGGGAAAGGACAACGAAACAGTCAAGAGCTTCGTCGCGGACCTTAA
GTCACATGGCGGCGATCCTGATAGCATCACAGACGCTGCTATTGACATGTCCAAGGCATTCATAAAGGGTGTCAAAGAGCAGTTGCCCCATGCCGTGGTC
ACCTTCGATAAATTCCACGTCATCAAGCTTATGAACGATAAGCTTAGTAAGATAAGGGCTCAAGAAGCCAGGTTATTTCCTGAAATCCTGAAAAAGAGCA
GAAACCTGTTCCTCAAAAATCCAGAGAACCTGACACCGGAAGAGGAACAGCGCCTGGATGCCATTATCACCAGTCAAAGCTTAAGGAGTACGGAAGCTTA
CATGCACAAGCTGAACCTTCAGAACGTCTATTTTGCTTCAAGCCGAACGGAGGCAGAAACCCTGTTGACCAAATGGCATCGGAAAGCCGCCGCAAGCTCA
ATCCAACTCATCAAGAACATGGCCGAATCTGTAAAAGAGCATTGGGATGGCATTCTGGCACATTTTGAAAGCGGCCTGACTAGCGGCTTCATTGAGGGCA
TCAACAGCCTAATTCAATCAGCCAAAACTCGGGCACGAGGCTATCGGAATCCTGACAACTTGATCTGCATGGCTTATCTGGTTGCAGGCAAGCTCAACCT
AAAGTCGCTATTCCCTCTACCCACTTGATTCGTTGCAGAGCC
TCTTTTTGGTGCTGCTCTTGGAATTGCCATCCCGTGGAAGGTTACCTCTGTTGACTTCAACAAGAAGTCAAGTCGTTTGGACATAACCATCGACTTCCAG
CGGGGAGCCACCTTTCCCTGTCCGGTCTGCGGAACGTTGTCACCAGTCCATGACACCACGGAGAAAGAGTGGCGGCATCTGAATTTCTTCCAGTACGAAG
CCTACCTTCATGCGCGTGTTCCACGGGTAAAGTGCCCTAACAGCGACTGCGGCGTGAAGTTGGTCCAGGTACCCTGGGCTCGCGCAGGCTCAGGATTTAC
GCTGCTGTTTGAGGCCCTGGCCATGACCATGGCTCGTGATTTGCCGGTGAAGGTCATGAGCAGGCTGTTTGCCGTTACCGATACCCGTCTATGGCGGTTG
ATTCAATCCTATGTCGAGAAGGCAAGGGCCGCAGAAGACTTCTCCGAGGTGAAGAGGGTCGGTGCGGATGAAACCTTTGCCGGGCGCAGTCATGACGAGA
AATTCGTCACCTTCTTCTTCGACCTCGACATGCATAAGCTCTTGTTCGGCACGACGGGAAAGGACAACGAAACAGTCAAGAGCTTCGTCGCGGACCTTAA
GTCACATGGCGGCGATCCTGATAGCATCACAGACGCTGCTATTGACATGTCCAAGGCATTCATAAAGGGTGTCAAAGAGCAGTTGCCCCATGCCGTGGTC
ACCTTCGATAAATTCCACGTCATCAAGCTTATGAACGATAAGCTTAGTAAGATAAGGGCTCAAGAAGCCAGGTTATTTCCTGAAATCCTGAAAAAGAGCA
GAAACCTGTTCCTCAAAAATCCAGAGAACCTGACACCGGAAGAGGAACAGCGCCTGGATGCCATTATCACCAGTCAAAGCTTAAGGAGTACGGAAGCTTA
CATGCACAAGCTGAACCTTCAGAACGTCTATTTTGCTTCAAGCCGAACGGAGGCAGAAACCCTGTTGACCAAATGGCATCGGAAAGCCGCCGCAAGCTCA
ATCCAACTCATCAAGAACATGGCCGAATCTGTAAAAGAGCATTGGGATGGCATTCTGGCACATTTTGAAAGCGGCCTGACTAGCGGCTTCATTGAGGGCA
TCAACAGCCTAATTCAATCAGCCAAAACTCGGGCACGAGGCTATCGGAATCCTGACAACTTGATCTGCATGGCTTATCTGGTTGCAGGCAAGCTCAACCT
AAAGTCGCTATTCCCTCTACCCACTTGATTCGTTGCAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1242 bp | 413 aa | 87 | 1328 | + | No |
Chemistry : Unknow
ORF sequence :
MNPEDLFGAALGIAIPWKVTSVDFNKKSSRLDITIDFQRGATFPCPVCGTLSPVHDTTEKEWRHLNFFQYEAYLHARVPRVKCPNSDCGVKLVQVPWARA
GSGFTLLFEALAMTMARDLPVKVMSRLFAVTDTRLWRLIQSYVEKARAAEDFSEVKRVGADETFAGRSHDEKFVTFFFDLDMHKLLFGTTGKDNETVKSF
VADLKSHGGDPDSITDAAIDMSKAFIKGVKEQLPHAVVTFDKFHVIKLMNDKLSKIRAQEARLFPEILKKSRNLFLKNPENLTPEEEQRLDAIITSQSLR
STEAYMHKLNLQNVYFASSRTEAETLLTKWHRKAAASSIQLIKNMAESVKEHWDGILAHFESGLTSGFIEGINSLIQSAKTRARGYRNPDNLICMAYLVA
GKLNLKSLFPLPT
GSGFTLLFEALAMTMARDLPVKVMSRLFAVTDTRLWRLIQSYVEKARAAEDFSEVKRVGADETFAGRSHDEKFVTFFFDLDMHKLLFGTTGKDNETVKSF
VADLKSHGGDPDSITDAAIDMSKAFIKGVKEQLPHAVVTFDKFHVIKLMNDKLSKIRAQEARLFPEILKKSRNLFLKNPENLTPEEEQRLDAIITSQSLR
STEAYMHKLNLQNVYFASSRTEAETLLTKWHRKAAASSIQLIKNMAESVKEHWDGILAHFESGLTSGFIEGINSLIQSAKTRARGYRNPDNLICMAYLVA
GKLNLKSLFPLPT
Blast result :
Comments
ISGur7 is 63% (ORFA) aa similar to ISTfe1.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavinadel Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,Chertkov,O., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F.,Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Shelobolina,E.,Aklujkar,M., Lovley,D. and Richardson,P.(2007) Direct submission GenBank.