ISGur7

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_009483 ND Geobacter uraniumreducens
Geobacter uraniumreducens Rf4
DNA section
IS Length : 1342 bp

Ends


IR Length : 20/26

IRL : GGCTCCTCGACGAATTGAGTGGGTAGCCTGGGCCGGGTTGATGTAAGATA
IRR : GGCTCTGCAACGAATCAAGTGGGTAGAGGGAATAGCGACTTTAGGTTGAG

Insertion site


Left flankDirect repeatRight flankDR Length
CAGGGTCCATTTCTTCGCGATGTTTCTC8

DNA sequence

GGCTCCTCGACGAATTGAGTGGGTAGCCTGGGCCGGGTTGATGTAAGATAGGCCACCATCACTCAGCCTGGAGGTTAGTAATCGCTATGAATCCTGAAGA
TCTTTTTGGTGCTGCTCTTGGAATTGCCATCCCGTGGAAGGTTACCTCTGTTGACTTCAACAAGAAGTCAAGTCGTTTGGACATAACCATCGACTTCCAG
CGGGGAGCCACCTTTCCCTGTCCGGTCTGCGGAACGTTGTCACCAGTCCATGACACCACGGAGAAAGAGTGGCGGCATCTGAATTTCTTCCAGTACGAAG
CCTACCTTCATGCGCGTGTTCCACGGGTAAAGTGCCCTAACAGCGACTGCGGCGTGAAGTTGGTCCAGGTACCCTGGGCTCGCGCAGGCTCAGGATTTAC
GCTGCTGTTTGAGGCCCTGGCCATGACCATGGCTCGTGATTTGCCGGTGAAGGTCATGAGCAGGCTGTTTGCCGTTACCGATACCCGTCTATGGCGGTTG
ATTCAATCCTATGTCGAGAAGGCAAGGGCCGCAGAAGACTTCTCCGAGGTGAAGAGGGTCGGTGCGGATGAAACCTTTGCCGGGCGCAGTCATGACGAGA
AATTCGTCACCTTCTTCTTCGACCTCGACATGCATAAGCTCTTGTTCGGCACGACGGGAAAGGACAACGAAACAGTCAAGAGCTTCGTCGCGGACCTTAA
GTCACATGGCGGCGATCCTGATAGCATCACAGACGCTGCTATTGACATGTCCAAGGCATTCATAAAGGGTGTCAAAGAGCAGTTGCCCCATGCCGTGGTC
ACCTTCGATAAATTCCACGTCATCAAGCTTATGAACGATAAGCTTAGTAAGATAAGGGCTCAAGAAGCCAGGTTATTTCCTGAAATCCTGAAAAAGAGCA
GAAACCTGTTCCTCAAAAATCCAGAGAACCTGACACCGGAAGAGGAACAGCGCCTGGATGCCATTATCACCAGTCAAAGCTTAAGGAGTACGGAAGCTTA
CATGCACAAGCTGAACCTTCAGAACGTCTATTTTGCTTCAAGCCGAACGGAGGCAGAAACCCTGTTGACCAAATGGCATCGGAAAGCCGCCGCAAGCTCA
ATCCAACTCATCAAGAACATGGCCGAATCTGTAAAAGAGCATTGGGATGGCATTCTGGCACATTTTGAAAGCGGCCTGACTAGCGGCTTCATTGAGGGCA
TCAACAGCCTAATTCAATCAGCCAAAACTCGGGCACGAGGCTATCGGAATCCTGACAACTTGATCTGCATGGCTTATCTGGTTGCAGGCAAGCTCAACCT
AAAGTCGCTATTCCCTCTACCCACTTGATTCGTTGCAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1242 bp413 aa871328+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MNPEDLFGAALGIAIPWKVTSVDFNKKSSRLDITIDFQRGATFPCPVCGTLSPVHDTTEKEWRHLNFFQYEAYLHARVPRVKCPNSDCGVKLVQVPWARA
GSGFTLLFEALAMTMARDLPVKVMSRLFAVTDTRLWRLIQSYVEKARAAEDFSEVKRVGADETFAGRSHDEKFVTFFFDLDMHKLLFGTTGKDNETVKSF
VADLKSHGGDPDSITDAAIDMSKAFIKGVKEQLPHAVVTFDKFHVIKLMNDKLSKIRAQEARLFPEILKKSRNLFLKNPENLTPEEEQRLDAIITSQSLR
STEAYMHKLNLQNVYFASSRTEAETLLTKWHRKAAASSIQLIKNMAESVKEHWDGILAHFESGLTSGFIEGINSLIQSAKTRARGYRNPDNLICMAYLVA
GKLNLKSLFPLPT

 

Blast result :
Comments
ISGur7 is 63% (ORFA) aa similar to ISTfe1.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavinadel Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,Chertkov,O., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F.,Land,M., Hauser,L., Kyrpides,N., Mikhailova,N., Shelobolina,E.,Aklujkar,M., Lovley,D. and Richardson,P.(2007) Direct submission GenBank.