ISBmu11
- Family IS3
- Group IS150
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_010804 | ND | Burkholderia multivorans | Burkholderia multivorans ATCC 17616 |
DNA section
IS Length : 1626 bp
Ends
IR Length : 32/39
IRL : TGACCCACCGGGGATGCGGACAAAATCTTGGACTACTTTGGAGGTAGTCC
IRR : TGACCCACCGGGGATGCGGCTATTTTCTTGGACTGATTTACGTTGCTAAC
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CACGCAGAAC | AGATTCGGTG | 0 |
DNA sequence
TGACCCACCGGGGATGCGGACAAAATCTTGGACTACTTTGGAGGTAGTCCATGTATTCATACGAAGACCGCGTTCGGGCGGTCGAGCTGTACCTGAAACT
CGGAAAGCGCGTCAAGGCGACAATCCGCCAGTTGGGTTACCCGACGAAGAATTCTCTCAAGGCGTGGTGCGAGGAATTCGAGAAGAGTGGCGATCTGCAG
AAAGAGTATGTTCGCGTAAAGCCGAAGTACTCAGAAGAACAGAAGAACCTGGCACTTGAGCATTACGTCAATCACGGGCGCAGCTTCAGCTTCACCCTCA
GGGCATTAGGCTATCCCTGTCGCCAGATACTGACGGCGTGGGTTCGCGAGCGCTATCCGGAAACCAGGAAACGCGTGGTTGGCAAGGCAGGCCGACCGGC
CGTGTCATTGGCGACCAGGCAGCTCGCGGTGTACGAACTGTGCACACGGGAAGGAAGTGCACAGGCGGTGGCGCAAAAGCTGGACGTCGACAGGGTGTCG
CTGTACAACTGGAAGAACCAGTTACTCGGCCGAGGGGCCCCTGCATCCATGAAGCGCGACAAGGGATCACCATCAGAGACGGATCGGGACGAACTGGAGC
GGCAGGTCGAAGAGCTCCGGCGCGACATTCGCAATCTGAAGCTTGAACACGACCTGTTGAAGAAGGCGAATGAACTCGTAAAAAAAGACCTGGGCGTCGA
CCTGTCACTCCTGAGCAATCGGGAGAAGACGACGCTGGTTGACGCCCTGAGAGAAGAATACGGTTTGACTGAGCTGCTTGAGCGGTTGGACCTGGCGCGC
AGCTCCTATTTTTATCATCGGTCGCCCATACGGGTTGCCGACAAATATGCAGATGTCCGTCGTACCGTTGCAGAGATCTTCGAGGACAATCACCGATCCT
ACGGCTATCGTCGGGTGCAAGCAGCGCTTAGCAGGCAACGGGTGTTTCTATCGGAGAAAGTCGTGCGTCGCCTCATGAAACAAGGCGGCCTCCACGCAGC
AAGGCCCAAGCGGCGCCGATATCGCTCTTATATCGGGGAAATCAGCCCTGCCCCAGATAACATCATCAATCGCGATTTCCACGCGAACGCCCCCAACGAA
AAGTGGGTGACGGATATTTCCGAGTTCCAGATTCCTGCGGGGAAGGTATATCTATCGCCCATGATCGACTGCTTCGATGGGATGGTAGTCAGCTGGTCGA
TTGGCACAAGCCCCGACGCAGAGCTCGTGAATTCCATGTTAGATGCGGCTATCGAGACCGTGACCGAGGACGACGAGACGCCGATCGTGCATTCCGATCG
GGGTGGCCACTACCGTTGGCCTGGCTGGCTATCGCGGGTTGCAAAGGCTAAGCTGATCCGCTCCATGTCGCGTAAAGCCTGTTCACCGGACAACGCGGCC
TGTGAGGGATTCTTCGGCAGGCTAAAGACCGAGATGTTCTATCCAGGAGACTGGCGTTCGACGACCATCGCGGAGTTCGTTGAGGTACTGGACGCCTACG
TTCGCTGGTACAACGAGAAACGGATCAAGGGCTCCCTTGGCTATCTCAGCCCCATCGAGTACCGTGAAAGCCTTGGGTTAGCAACGTAAATCAGTCCAAG
AAAATAGCCGCATCCCCGGTGGGTCA
CGGAAAGCGCGTCAAGGCGACAATCCGCCAGTTGGGTTACCCGACGAAGAATTCTCTCAAGGCGTGGTGCGAGGAATTCGAGAAGAGTGGCGATCTGCAG
AAAGAGTATGTTCGCGTAAAGCCGAAGTACTCAGAAGAACAGAAGAACCTGGCACTTGAGCATTACGTCAATCACGGGCGCAGCTTCAGCTTCACCCTCA
GGGCATTAGGCTATCCCTGTCGCCAGATACTGACGGCGTGGGTTCGCGAGCGCTATCCGGAAACCAGGAAACGCGTGGTTGGCAAGGCAGGCCGACCGGC
CGTGTCATTGGCGACCAGGCAGCTCGCGGTGTACGAACTGTGCACACGGGAAGGAAGTGCACAGGCGGTGGCGCAAAAGCTGGACGTCGACAGGGTGTCG
CTGTACAACTGGAAGAACCAGTTACTCGGCCGAGGGGCCCCTGCATCCATGAAGCGCGACAAGGGATCACCATCAGAGACGGATCGGGACGAACTGGAGC
GGCAGGTCGAAGAGCTCCGGCGCGACATTCGCAATCTGAAGCTTGAACACGACCTGTTGAAGAAGGCGAATGAACTCGTAAAAAAAGACCTGGGCGTCGA
CCTGTCACTCCTGAGCAATCGGGAGAAGACGACGCTGGTTGACGCCCTGAGAGAAGAATACGGTTTGACTGAGCTGCTTGAGCGGTTGGACCTGGCGCGC
AGCTCCTATTTTTATCATCGGTCGCCCATACGGGTTGCCGACAAATATGCAGATGTCCGTCGTACCGTTGCAGAGATCTTCGAGGACAATCACCGATCCT
ACGGCTATCGTCGGGTGCAAGCAGCGCTTAGCAGGCAACGGGTGTTTCTATCGGAGAAAGTCGTGCGTCGCCTCATGAAACAAGGCGGCCTCCACGCAGC
AAGGCCCAAGCGGCGCCGATATCGCTCTTATATCGGGGAAATCAGCCCTGCCCCAGATAACATCATCAATCGCGATTTCCACGCGAACGCCCCCAACGAA
AAGTGGGTGACGGATATTTCCGAGTTCCAGATTCCTGCGGGGAAGGTATATCTATCGCCCATGATCGACTGCTTCGATGGGATGGTAGTCAGCTGGTCGA
TTGGCACAAGCCCCGACGCAGAGCTCGTGAATTCCATGTTAGATGCGGCTATCGAGACCGTGACCGAGGACGACGAGACGCCGATCGTGCATTCCGATCG
GGGTGGCCACTACCGTTGGCCTGGCTGGCTATCGCGGGTTGCAAAGGCTAAGCTGATCCGCTCCATGTCGCGTAAAGCCTGTTCACCGGACAACGCGGCC
TGTGAGGGATTCTTCGGCAGGCTAAAGACCGAGATGTTCTATCCAGGAGACTGGCGTTCGACGACCATCGCGGAGTTCGTTGAGGTACTGGACGCCTACG
TTCGCTGGTACAACGAGAAACGGATCAAGGGCTCCCTTGGCTATCTCAGCCCCATCGAGTACCGTGAAAGCCTTGGGTTAGCAACGTAAATCAGTCCAAG
AAAATAGCCGCATCCCCGGTGGGTCA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1539 bp | 512 aa | 51 | 1589 | + | No |
Chemistry : DDE
ORF sequence :
MYSYEDRVRAVELYLKLGKRVKATIRQLGYPTKNSLKAWCEEFEKSGDLQKEYVRVKPKYSEEQKNLALEHYVNHGRSFSFTLRALGYPCRQILTAWVRE
RYPETRKRVVGKAGRPAVSLATRQLAVYELCTREGSAQAVAQKLDVDRVSLYNWKNQLLGRGAPASMKRDKGSPSETDRDELERQVEELRRDIRNLKLEH
DLLKKANELVKKDLGVDLSLLSNREKTTLVDALREEYGLTELLERLDLARSSYFYHRSPIRVADKYADVRRTVAEIFEDNHRSYGYRRVQAALSRQRVFL
SEKVVRRLMKQGGLHAARPKRRRYRSYIGEISPAPDNIINRDFHANAPNEKWVTDISEFQIPAGKVYLSPMIDCFDGMVVSWSIGTSPDAELVNSMLDAA
IETVTEDDETPIVHSDRGGHYRWPGWLSRVAKAKLIRSMSRKACSPDNAACEGFFGRLKTEMFYPGDWRSTTIAEFVEVLDAYVRWYNEKRIKGSLGYLS
PIEYRESLGLAT
RYPETRKRVVGKAGRPAVSLATRQLAVYELCTREGSAQAVAQKLDVDRVSLYNWKNQLLGRGAPASMKRDKGSPSETDRDELERQVEELRRDIRNLKLEH
DLLKKANELVKKDLGVDLSLLSNREKTTLVDALREEYGLTELLERLDLARSSYFYHRSPIRVADKYADVRRTVAEIFEDNHRSYGYRRVQAALSRQRVFL
SEKVVRRLMKQGGLHAARPKRRRYRSYIGEISPAPDNIINRDFHANAPNEKWVTDISEFQIPAGKVYLSPMIDCFDGMVVSWSIGTSPDAELVNSMLDAA
IETVTEDDETPIVHSDRGGHYRWPGWLSRVAKAKLIRSMSRKACSPDNAACEGFFGRLKTEMFYPGDWRSTTIAEFVEVLDAYVRWYNEKRIKGSLGYLS
PIEYRESLGLAT
Blast result :
Comments
ISBmu11 is 80% aa similar to ISAtu3.
There is no -1 programmed frameshift.
There is no -1 programmed frameshift.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Bruce,D., Pitluck,S. and Richardson,P. (2006) Direct submission GenBank.