ISGsp3
- Family ISLre2
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_012793 | ND | Geobacillus sp. | Anoxybacillus flavithermus WK1 Geobacillus kaustophilus HTA426 Geobacillus sp. WCH70 Geobacillus kaustophilus HTA426 plasmid pHTA426 Geobacillus thermoleovorans CCB_US3_UF5 |
DNA section
IS Length : 1519 bp
Ends
IR Length : 20/29
IRL : GTGTGAGTAAAATATTTGTGGGTGACATTCAGGAATGATTCCCCGACGAG
IRR : GAGTCAGTCAAGACTTTGTGGAGAACATTTTTTCGGTTCACTACGGGCGT
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| ATCCTCTAGG | CGCGTGGGTG | TAATATCTTG | 10 |
| ACCGCCGTTT | CTAAGGCTTA | TTGCCTGTTG | 10 |
| ACCGCCGTTT | CTAAGGCTTA | TTGCCTGTTG | 10 |
| CATACCGCCC | AGCGTCCTA | TTTCCACTTT | 9 |
| GTGGATTTGC | ATACTTGAC | CTCCTAGTTGC | 9 |
| TATTGAACAA | AGATGAAAT | TTAGAGGTGGA | 9 |
| TGGGCGCAAA | AAAATGCGA | GCGACCATTGA | 9 |
| CACTCTTAAT | CTTGTATAA | TAACTGCTTG | 9 |
| ACGGCGGCTT | GGCTTTTCG | TTCATCATTG | 9 |
| CAGCAAGTTG | TTTGCCTTT | TTGTTCATTG | 9 |
| TTGTCAGCTA | ATGTTCACA | CAATCGTTTT | 9 |
| TTTTTGTTTG | CTGGCTCGC | TTTTTACGAG | 9 |
| GCGCTATCCC | CCATTTGGA | TTCGTAGTGG | 9 |
| CAAAGGATTT | TTGTAGATT | GGTTGGTTTT | 9 |
| AACCGGCTCT | TCACCACAA | AATGTACTTG | 9 |
| AATCTGTCCC | ATTGCGGAA | AATACAGTTG | 9 |
| CGTCCTTTTT | CCTCATGCC | ATGTGATTTG | 9 |
| GCCTTGGGAC | GGCCTTGCC | GCTTCATTTG | 9 |
| ATCAGAAAAG | CAAGCCATG | CAATCTCTCC | 9 |
| AGAAGGATAT | TGTAGAAAA | ATATACATTG | 9 |
| CAGCTGCCAT | CGTGAGCGG | AAACACGGTG | 9 |
| CATGGGCAAT | CGATGACAC | CATCATCTTG | 9 |
| TTTTTGTTTT | CCGGTTCAC | TTTTTACGAG | 9 |
| TCGCATAGTA | TGACAATGT | TTTCTTTTTG | 9 |
| GTTTATTTTT | TTCTTTTAA | AATATGGTTG | 9 |
| CGCAGCGAAT | ACAGCTCAT | AAACTTGTTG | 9 |
| CGTTTCTAAA | CTTCCCGAA | GATAGCGACA | 9 |
| ACGGCCGTCC | TGGTTTTAT | TGACGTATTG | 9 |
| TACAGCGAGA | CAGGTTGGT | TGGGTCATTT | 9 |
| TACAGCGAGA | CAGGTTGGT | TGGGTCATTT | 9 |
| CTTTGGTCAA | ACCATTTAG | CTGTTGTTTG | 9 |
| ATTGCTCAAT | CATTATTAT | GATTTCCTTG | 9 |
| CGCCCTTTTT | TGCATACAT | ATATTGTTTG | 9 |
| TTTGGATCCA | GACCCAGGG | GATGAAGATG | 9 |
| CTAGACAACA | ACCGTCCAT | GTAGGAGTCG | 9 |
| TTTCACAGTG | AAATCCCCC | TTTATTGTTG | 9 |
| TCCCTTTTCT | TTTCCTCAA | TTTAGGAGTG | 9 |
| CTTTTTCCGG | AGACAATAC | GGATGGCTAG | 9 |
| CACGGATGGA | ATAAATAAA | TAAAAACTTG | 9 |
| GAGGATGGAC | CGCGAGGCG | CTTTCGGTTG | 9 |
| TCGGCAAGAT | TTCTTTTCC | CACCAGGTTG | 9 |
| CAAATCCATC | ATGGGTACT | AAAAAAACAT | 9 |
| CTTAGAAAAG | ATCCAGAA | AACCGTTCTT | 8 |
| TGGAAATGCT | ATTCGTTC | CGTGACAGCA | 8 |
| ATGTACTCAA | ACCATCTCTT | 0 | |
| GAAAGTCCAC | GAATGGTAAT | 0 | |
| TTATTGTTTA | CTTCTGCCAG | 0 | |
| TCGTTATAGG | ATTATTATAT | 0 | |
| CAAAGAAACC | TATAATAATC | 0 | |
| AAATCTTGAA | TCGATGCATA | 0 | |
| GGTTCAAGCA | CTTCAAGCAA | 0 | |
| TTTCTTTTCC | CAACGCCATG | 0 | |
| TCATTATTAT | TTCTTTTCCC | 0 | |
| TTTCTTTTCC | CAACGCCATG | 0 | |
| TTAGGTATAG | CTTGTGTAAC | 0 |
DNA sequence
GTGTGAGTAAAATATTTGTGGGTGACATTCAGGAATGATTCCCCGACGAGGGTTGCGAACTTTTGTTCGCGACGCTCGTCGGGGCCACCAAGCGAAGCGC
GGTAGAAAAAAGCAAATGTCATGCAAAAAGGACTCTCTCCCTGCTATGATGGTGATGACCAACATCCATAAAACAGGAGGGAGAGAGTCCATGAAACATC
TTACCACAGAATGGCCTTTATTAAAAGAGCTGGAGGAACAATTAGTCAGAACTCTTCAAAAGGTGTTCGCTGTCTTGTTGGCGGCCCTTTTGGAGGAGAT
TGATCAACAACTGGCGGAAGCGCGGGACAAGCGCCGGTATCAGCTGAAAGACAAACGGCCGACCACGATCCAAACGCTGTTTGGAGAAGTGACGTTTCGA
CGGAACTACTACTATGATCGGCAGGCGGGGGCGTATACCTTCTTGCTGGATGCCGAACTGGGCTTTGATGGAGCGCAGTCGATCAGCCCTTGCCTCGAGG
AAACGGCGGTCGAGTTGGCCGTAGAGTGCTCTTCCTACCGCAAAGCAGCCCGTACGTTGGAGTCGATCGTGGGGTATGCGGTCCTAAGCCACGAGGCGAT
TCGCCAACTGGTGCTGGAGGCCCCTGTCTCGCTGCACCACCCTGTTTCCCAACGGCACGGCCGAGTGCTGTTTGTGGAGGCGGATGGGCTGTTCATTTCC
CGCCAGGGGAAAGGGAAACGGGCGAAAGAAGAGAAAATCCTGGCGGTTCACGAGGGATGGAAACGAAACGGTTCGCAGCTCGAGCTCGTGAACCGGCGCC
ACTACCTCCATGAAGGGGAGGGAGACGTGTGGGAACGGTTCGAAGAGTGGCTGATGAACGAATATGCCTATGATCCGTGCCGGGACCTGTTGATCATCAA
CGGCGACGCGGCGTCGTGGATCACGGCCTGCCGGGAGTATTTTGGGAAGCGGGCGTGCTTTCAGCTGGATCGATTTCATGTGGCGCGGGAGCTGCGTCAG
TGTCTGTCCGGCCATCCGCGTTGGCGGGAGGTGCGGAAGAAGCTGGCGAAACAAGACGAAGAGGGGCTTCTCGTGGAGCTGAACAGCGCGGTCGGCACGT
TGGAGGACGAAGCGAAAGAGAAGCAGATGGCTGCCATGATCCGCCGGATCGAGTCGATGCCGGGATGCATCCGGGACTATCGGGAGTGGCTGTCGGAGCA
AGGGGTGGAGACGACCGGCATGCGTCCGATGGGCCACGCCGAGAGCGTGATGAGCCGGTTTGCGCATCGGGTGAAATCCCGCCGCAGCTGGAAAGACCAA
GGGCTTCGGGCGTTTCTGAGGGCGATGGCGGCCCGAATCGACGGGATTTGGCGGAGAAATGGGCAGTTGGTGGAGGAAGAAGAGACCCGAACGGCGGCCT
CGGCCTCAACAAAGTCCAAGCGGATCGAACAGGCCAAACGGAAGGCCGGACGGTTATGGGCAGATGTGGTGCGTCAGAATCTACCGTGTCTGCAGCGGTC
ATCCGGGACACCGATCCATCAAGCGTTGTCGGCGCTCCGGGATGGTGGTTGGGTGTAAAAAAATGGAATATCGTATCATCGCCTCAAGATGAGGGATGAG
AGTCCGAAAGCGCTTACGATATGAATTCCTGAAAATGGTTCGCTAACTAGTGATTTACAACGCCCGTAGTGAACCGAAAAAATGTTCTCCACAAAGTCTT
GACTGACTC
GGTAGAAAAAAGCAAATGTCATGCAAAAAGGACTCTCTCCCTGCTATGATGGTGATGACCAACATCCATAAAACAGGAGGGAGAGAGTCCATGAAACATC
TTACCACAGAATGGCCTTTATTAAAAGAGCTGGAGGAACAATTAGTCAGAACTCTTCAAAAGGTGTTCGCTGTCTTGTTGGCGGCCCTTTTGGAGGAGAT
TGATCAACAACTGGCGGAAGCGCGGGACAAGCGCCGGTATCAGCTGAAAGACAAACGGCCGACCACGATCCAAACGCTGTTTGGAGAAGTGACGTTTCGA
CGGAACTACTACTATGATCGGCAGGCGGGGGCGTATACCTTCTTGCTGGATGCCGAACTGGGCTTTGATGGAGCGCAGTCGATCAGCCCTTGCCTCGAGG
AAACGGCGGTCGAGTTGGCCGTAGAGTGCTCTTCCTACCGCAAAGCAGCCCGTACGTTGGAGTCGATCGTGGGGTATGCGGTCCTAAGCCACGAGGCGAT
TCGCCAACTGGTGCTGGAGGCCCCTGTCTCGCTGCACCACCCTGTTTCCCAACGGCACGGCCGAGTGCTGTTTGTGGAGGCGGATGGGCTGTTCATTTCC
CGCCAGGGGAAAGGGAAACGGGCGAAAGAAGAGAAAATCCTGGCGGTTCACGAGGGATGGAAACGAAACGGTTCGCAGCTCGAGCTCGTGAACCGGCGCC
ACTACCTCCATGAAGGGGAGGGAGACGTGTGGGAACGGTTCGAAGAGTGGCTGATGAACGAATATGCCTATGATCCGTGCCGGGACCTGTTGATCATCAA
CGGCGACGCGGCGTCGTGGATCACGGCCTGCCGGGAGTATTTTGGGAAGCGGGCGTGCTTTCAGCTGGATCGATTTCATGTGGCGCGGGAGCTGCGTCAG
TGTCTGTCCGGCCATCCGCGTTGGCGGGAGGTGCGGAAGAAGCTGGCGAAACAAGACGAAGAGGGGCTTCTCGTGGAGCTGAACAGCGCGGTCGGCACGT
TGGAGGACGAAGCGAAAGAGAAGCAGATGGCTGCCATGATCCGCCGGATCGAGTCGATGCCGGGATGCATCCGGGACTATCGGGAGTGGCTGTCGGAGCA
AGGGGTGGAGACGACCGGCATGCGTCCGATGGGCCACGCCGAGAGCGTGATGAGCCGGTTTGCGCATCGGGTGAAATCCCGCCGCAGCTGGAAAGACCAA
GGGCTTCGGGCGTTTCTGAGGGCGATGGCGGCCCGAATCGACGGGATTTGGCGGAGAAATGGGCAGTTGGTGGAGGAAGAAGAGACCCGAACGGCGGCCT
CGGCCTCAACAAAGTCCAAGCGGATCGAACAGGCCAAACGGAAGGCCGGACGGTTATGGGCAGATGTGGTGCGTCAGAATCTACCGTGTCTGCAGCGGTC
ATCCGGGACACCGATCCATCAAGCGTTGTCGGCGCTCCGGGATGGTGGTTGGGTGTAAAAAAATGGAATATCGTATCATCGCCTCAAGATGAGGGATGAG
AGTCCGAAAGCGCTTACGATATGAATTCCTGAAAATGGTTCGCTAACTAGTGATTTACAACGCCCGTAGTGAACCGAAAAAATGTTCTCCACAAAGTCTT
GACTGACTC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1368 bp | 455 aa | 191 | 1558 | + | No |
Chemistry : DDE
ORF sequence :
MKHLTTEWPLLKELEEQLVRTLQKVFAVLLAALLEEIDQQLAEARDKRRYQLKDKRPTTIQTLFGEVTFRRNYYYDRQAGAYTFLLDAELGFDGAQSISP
CLEETAVELAVECSSYRKAARTLESIVGYAVLSHEAIRQLVLEAPVSLHHPVSQRHGRVLFVEADGLFISRQGKGKRAKEEKILAVHEGWKRNGSQLELV
NRRHYLHEGEGDVWERFEEWLMNEYAYDPCRDLLIINGDAASWITACREYFGKRACFQLDRFHVARELRQCLSGHPRWREVRKKLAKQDEEGLLVELNSA
VGTLEDEAKEKQMAAMIRRIESMPGCIRDYREWLSEQGVETTGMRPMGHAESVMSRFAHRVKSRRSWKDQGLRAFLRAMAARIDGIWRRNGQLVEEEETR
TAASASTKSKRIEQAKRKAGRLWADVVRQNLPCLQRSSGTPIHQALSALRDGGWV
CLEETAVELAVECSSYRKAARTLESIVGYAVLSHEAIRQLVLEAPVSLHHPVSQRHGRVLFVEADGLFISRQGKGKRAKEEKILAVHEGWKRNGSQLELV
NRRHYLHEGEGDVWERFEEWLMNEYAYDPCRDLLIINGDAASWITACREYFGKRACFQLDRFHVARELRQCLSGHPRWREVRKKLAKQDEEGLLVELNSA
VGTLEDEAKEKQMAAMIRRIESMPGCIRDYREWLSEQGVETTGMRPMGHAESVMSRFAHRVKSRRSWKDQGLRAFLRAMAARIDGIWRRNGQLVEEEETR
TAASASTKSKRIEQAKRKAGRLWADVVRQNLPCLQRSSGTPIHQALSALRDGGWV
Blast result :
Comments
References