ISGur1
- Family IS4
- Group ISPepr1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAON01000073 | ND | Geobacter uraniumreducens | Geobacter uraniumreducens Rf4 |
DNA section
IS Length : 1556 bp
Ends
IR Length : 13
IRL : CTCAACTTTCGCAGCTGGTAAATATATGTAACATATTGTAATTATTAATA
IRR : CTCAACTTTCGCACTAGCGAGATTGGCCGTAACTAGTTGACAGATATATG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAGTAGTTTCGCTTA | TTTGTAA | TATTTGAGAAATATC | 7 |
DNA sequence
CTCAACTTTCGCAGCTGGTAAATATATGTAACATATTGTAATTATTAATAGTATAGCGTCGCAATCTGGGTTAAAATGGCTTTGTTCCCCAACAAATCCA
CTAGCACAGAGAGACGACGCTATGCAGCAGATTGTAGCAGGATTTGCATCCGTAGAAAACCGGATTCATTCGTTCTTTCACAATCAGAACCTCGGCCAGT
TACTTCGGCAAAGCAATGTCAGGAAGGAAAAGGGCGTTAGCCTCGACACCTTGTTCCAGCTTTTGCTTTCCCTTGCCTTTACCGGAAAAAATCTGTTCCG
TCTCCTGGAGAGTCCAGATTCACCGGATGGTATCGGTAAAGACACTGCGTATCGGCTGTTGAACTCGGTCAATGCCAACTGGCGCCGTTTTCTGTTGCTG
CTCAGCACGCGGGTCATTGTCCAAAGGCTTCTCCCGCTGACCGATGAGACGACCACCAAGGTGCTGATCGCTGACGACACTCTGTATCGTCGCGACCGCA
GCAAGCGGGTCGAACTGCTGGCACGGGTGCATGACCACAACACCGGTCGTTACGTGCGTGGCTTCAGGATGCTCACCCTGGGGTGGTCCGATGGGAACAG
CTTTGTACCCATGATGCTGTCGATGCTCAGCTCTGCCAAGGATAAGAACCGCCTTGCCCCAATGCGTGAGGGCATCGATAAGCGCACCAACGGATATCAG
CGCCGCCGGGAGAGCATGAGGAAATCCACCGACGTACTGGTGGACATGGTTGCCTTGGCAATGAAGGCAGGAACCACTGCCCGGCACCTGCTCTTTGACA
GCTGGTTTGCTTTCCCCGCCACCATCAGGCGGATCCGCGCCCTGGGGATGCATACCATCTGCATGCTCAAGGATACGGGTAAGGTCACCTACGAGGTGCA
GGGGTGGCCGTTCACCCTGAAAGAACTATTCAAAGAGGTCCGCAAGCGACCCGGTCGAGCCAAAGTGTTGGCAGAGGTGCTGGTGACCATAGGTCAAGAC
ATTCACGGTAAACCGGTGGCAGCAAAGATCGTGTTCGTCCGCGACCGCAGTTCGAAGAAATGGCTGGCGCTCCTTTCCACCGATACGACCTTGACCGCCG
AGGAGATCATCACGCTCTACGGCCGTCGCTGGGACATCGAGGTGTTCTTCAAAATGGCCAAGTCGTTTCTGAATCTGGCAAAGGAGTTCCAGAGTCGTTC
CTTCGATGCTCTGGTCGCCCACGCCACACTGGTCTGCTGCCGCTACATTCTGCTTGAGCTGGTGAAACGGGAAAATGCTGATCCTCGAACTCTTGGCAGC
CTGTTTCACGCTCTATGCGATGAAATAAGACGAATTGGCTTCACAGAAGCAATGGCACTGTTGCTCACATTTCTGGAAGAATCACTCAACAGCATTATTG
GATTGTGCAAAGAGCAGGTGCAACAACTGATACAACGCTTTATAGAAACACTACCAAGAGCTTTCAGGGAGCGAATGCTACTTTTGGCCCCGGTATGCAG
CTAAACCATATATCTGTCAACTAGTTACGGCCAATCTCGCTAGTGCGAAAGTTGAG
CTAGCACAGAGAGACGACGCTATGCAGCAGATTGTAGCAGGATTTGCATCCGTAGAAAACCGGATTCATTCGTTCTTTCACAATCAGAACCTCGGCCAGT
TACTTCGGCAAAGCAATGTCAGGAAGGAAAAGGGCGTTAGCCTCGACACCTTGTTCCAGCTTTTGCTTTCCCTTGCCTTTACCGGAAAAAATCTGTTCCG
TCTCCTGGAGAGTCCAGATTCACCGGATGGTATCGGTAAAGACACTGCGTATCGGCTGTTGAACTCGGTCAATGCCAACTGGCGCCGTTTTCTGTTGCTG
CTCAGCACGCGGGTCATTGTCCAAAGGCTTCTCCCGCTGACCGATGAGACGACCACCAAGGTGCTGATCGCTGACGACACTCTGTATCGTCGCGACCGCA
GCAAGCGGGTCGAACTGCTGGCACGGGTGCATGACCACAACACCGGTCGTTACGTGCGTGGCTTCAGGATGCTCACCCTGGGGTGGTCCGATGGGAACAG
CTTTGTACCCATGATGCTGTCGATGCTCAGCTCTGCCAAGGATAAGAACCGCCTTGCCCCAATGCGTGAGGGCATCGATAAGCGCACCAACGGATATCAG
CGCCGCCGGGAGAGCATGAGGAAATCCACCGACGTACTGGTGGACATGGTTGCCTTGGCAATGAAGGCAGGAACCACTGCCCGGCACCTGCTCTTTGACA
GCTGGTTTGCTTTCCCCGCCACCATCAGGCGGATCCGCGCCCTGGGGATGCATACCATCTGCATGCTCAAGGATACGGGTAAGGTCACCTACGAGGTGCA
GGGGTGGCCGTTCACCCTGAAAGAACTATTCAAAGAGGTCCGCAAGCGACCCGGTCGAGCCAAAGTGTTGGCAGAGGTGCTGGTGACCATAGGTCAAGAC
ATTCACGGTAAACCGGTGGCAGCAAAGATCGTGTTCGTCCGCGACCGCAGTTCGAAGAAATGGCTGGCGCTCCTTTCCACCGATACGACCTTGACCGCCG
AGGAGATCATCACGCTCTACGGCCGTCGCTGGGACATCGAGGTGTTCTTCAAAATGGCCAAGTCGTTTCTGAATCTGGCAAAGGAGTTCCAGAGTCGTTC
CTTCGATGCTCTGGTCGCCCACGCCACACTGGTCTGCTGCCGCTACATTCTGCTTGAGCTGGTGAAACGGGAAAATGCTGATCCTCGAACTCTTGGCAGC
CTGTTTCACGCTCTATGCGATGAAATAAGACGAATTGGCTTCACAGAAGCAATGGCACTGTTGCTCACATTTCTGGAAGAATCACTCAACAGCATTATTG
GATTGTGCAAAGAGCAGGTGCAACAACTGATACAACGCTTTATAGAAACACTACCAAGAGCTTTCAGGGAGCGAATGCTACTTTTGGCCCCGGTATGCAG
CTAAACCATATATCTGTCAACTAGTTACGGCCAATCTCGCTAGTGCGAAAGTTGAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1383 bp | 460 aa | 122 | 1504 | + | No |
Chemistry : DDE
ORF sequence :
MQQIVAGFASVENRIHSFFHNQNLGQLLRQSNVRKEKGVSLDTLFQLLLSLAFTGKNLFRLLESPDSPDGIGKDTAYRLLNSVNANWRRFLLLLSTRVIV
QRLLPLTDETTTKVLIADDTLYRRDRSKRVELLARVHDHNTGRYVRGFRMLTLGWSDGNSFVPMMLSMLSSAKDKNRLAPMREGIDKRTNGYQRRRESMR
KSTDVLVDMVALAMKAGTTARHLLFDSWFAFPATIRRIRALGMHTICMLKDTGKVTYEVQGWPFTLKELFKEVRKRPGRAKVLAEVLVTIGQDIHGKPVA
AKIVFVRDRSSKKWLALLSTDTTLTAEEIITLYGRRWDIEVFFKMAKSFLNLAKEFQSRSFDALVAHATLVCCRYILLELVKRENADPRTLGSLFHALCD
EIRRIGFTEAMALLLTFLEESLNSIIGLCKEQVQQLIQRFIETLPRAFRERMLLLAPVCS
QRLLPLTDETTTKVLIADDTLYRRDRSKRVELLARVHDHNTGRYVRGFRMLTLGWSDGNSFVPMMLSMLSSAKDKNRLAPMREGIDKRTNGYQRRRESMR
KSTDVLVDMVALAMKAGTTARHLLFDSWFAFPATIRRIRALGMHTICMLKDTGKVTYEVQGWPFTLKELFKEVRKRPGRAKVLAEVLVTIGQDIHGKPVA
AKIVFVRDRSSKKWLALLSTDTTLTAEEIITLYGRRWDIEVFFKMAKSFLNLAKEFQSRSFDALVAHATLVCCRYILLELVKRENADPRTLGSLFHALCD
EIRRIGFTEAMALLLTFLEESLNSIIGLCKEQVQQLIQRFIETLPRAFRERMLLLAPVCS
Blast result :
Comments
ISGur1 is 62% aa similar to ISL5.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Bruce,D., Pitluck,S. and Richardson,P. (2006) Direct submission GenBank.