ISMae7

  • Family IS4
  • Group IS50
MGE type ISRelated element(s) :
Isoform Synonym(s) ISMae5
Accession numberTranspositionOriginHost
EF115385 ND Microcystis aeruginosa
Microcystis aeruginosa NIVA-CYA 228/1
DNA section
IS Length : 1589 bp

Ends


IR Length : 29

IRL : GCTATCCATTAGTCAGATCTTTCTTAACAAAAAGAGAAGAAACTTAAAAA
IRR : GCTATCCATTAGTCACATCTTTCTTAACATAAAATTTGACAAAAAGAGAA

Insertion site


Left flankDirect repeatRight flankDR Length
TAATCCCCCCTTGATAAGGGGGGTGTC7

DNA sequence

GCTATCCATTAGTCAGATCTTTCTTAACAAAAAGAGAAGAAACTTAAAAAAAGGGGAAACGATTGATAGGTATAGTTTTGAAAGAAGGAATTAAGGTGGA
GGTAAGCAAAAAAATGGAGAAATGGGCAGCCCAAGAATTACAGTATGCAGACCTAGGGGACACCAGAAGAAAGAAAAGGTTAATCAGTATCGTAGAAAAC
TTGGCCAGTCAACCTAGTACAAGTGTGCCACAAGCTTCGGGAAATCTAGCCGCAGCGAGTGCCACCTACGACTTTTGGAATTCCCCCTATTTTCACCCCT
CAGATATAATTGCCGCCCAAGCCAAAAGTACAGTAGAAAGAATCAAAGAACATCCAATAGTTTTGGCAGTGCAAGACACAACAAGTTTAGACTTTACGAC
CCAAAAAGCCAAAAAGGGAATGGGTTATCTAGATTATAAAAAATCCTTTGGTCTCAAAGTTCATACCACCTTAGGAGTGTCACCGCAAGGAATACCTTTA
GGACTGATTAATCAATATGTCTGGGCAAGAGAAGAAAAGAATTTAGGGATTGCCAAGCAAAGAAAAAAAAGAGAAACCGAAGAAAAAGAAAGTCAAAGAT
GGTTAGATTCTTTGTCAGAAACACAACAACAAATACCCGAAGATATTCAAGTAGTAACAATCGGAGATTGTGAGGCAGACATATTTGATTTATTTGCCCA
ATCAAGAAGTCCTAACTCTCATTTATTAATCCGAGGAACTCATAACCGAAAAGTTAACTATCTCGAAGACAAGCAAAAGTCAGGGCATCCAGAGCCTAAA
TATTTACATCAATCCATCAGAGAAATAAAAGCCTGTGGTAGCCTAGATGTGCAAGTAAAACGCAATCCTAATCACGAGGCTAGACTAGCTAAACTAACAG
TTAGATTTGCCAGTTTTGAAATACAAGTACCTAAGCATCACTCGAAAGCGAACCCTCGTCAACCGGTCAAATTACAGGTAATTTTAGCTGAAGAAGAAAA
TCCGCGTCCCGGAGTTAATCCTATCAGTTGGCTCCTCTTAACTAGCCTAGACATTAGTAGCTTTGAATCGGCGATAACCTGTGTGCGCTGGTATAGTTAT
CGCTGGTTAATAGAACGCTATCATTTTGCTTTAAAAAGTGGTTGTGGATTAGAAAAACTGCAATTAGAAACGGGTCGTAGAATTGAGATGGCCTTAGCTA
CCTATTCAATTGTAGCCTGGAGATTACTCTGGTTAACCTATCAAGCACGCTTACACGGAGAGGAGAGTTGTGAAAGTTTTTTGGAAGAACATGAATGGCA
ATCTTTGTGTGCCACTATTCATAAAAAGAGTCCGCCACCTGAAAAGCCGCCCTCCTTTCGAGAAGCGGTCAGAATGATTGCTTCTCTTGGGGGGTTTTTA
GGTAGAAAAGGTGACGGTGAACCAGGTGTTAAAACTATTTGGTTGGGACTGCGAAGGTTACATGATATCAGCCAGACTTGGAAACTATCTCATCAAATTA
GTCCCCCCATAGAACCCCCTTGAGCCATCTTGCACACTTTTCTCTTTTTGTCAAATTTTATGTTAAGAAAGATGTGACTAATGGATAGC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1410 bp469 aa1141523+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MEKWAAQELQYADLGDTRRKKRLISIVENLASQPSTSVPQASGNLAAASATYDFWNSPYFHPSDIIAAQAKSTVERIKEHPIVLAVQDTTSLDFTTQKAK
KGMGYLDYKKSFGLKVHTTLGVSPQGIPLGLINQYVWAREEKNLGIAKQRKKRETEEKESQRWLDSLSETQQQIPEDIQVVTIGDCEADIFDLFAQSRSP
NSHLLIRGTHNRKVNYLEDKQKSGHPEPKYLHQSIREIKACGSLDVQVKRNPNHEARLAKLTVRFASFEIQVPKHHSKANPRQPVKLQVILAEEENPRPG
VNPISWLLLTSLDISSFESAITCVRWYSYRWLIERYHFALKSGCGLEKLQLETGRRIEMALATYSIVAWRLLWLTYQARLHGEESCESFLEEHEWQSLCA
TIHKKSPPPEKPPSFREAVRMIASLGGFLGRKGDGEPGVKTIWLGLRRLHDISQTWKLSHQISPPIEPP

 

Blast result :
Comments
ISMae7 is 48% aa similar to ISAzo5.
References
1] Tooming-Klunderud, A. (2007) Direct submission.