ISWen2
- Family IS110
- Group
Isoform Synonym(s) ISWpi7
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAGC01000200.1 | ND | Wolbachia endosymbiont | Wolbachia endosymbiont of Drosophila ananassae |
DNA section
IS Length : 1415 bp
Ends
Left end : CCTTGTATCTTGAAAAAAGCATCTAGTGTTTTTAAGCTTAAGCATTAGGTGGAGAAGGGAAGAACTCTGGAAGATTCCTTAGATATAAAATCTGTAGAAA
Right end : TGGTTAGTGGATATGTTGATAAGTAAATTTCTGCTGTTTTATATGTAACTAATTTACTTATCAACATATCCACTAACTATAATCTGTATACTGCTACACA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CCTTGTATCTTGAAAAAAGCATCTAGTGTTTTTAAGCTTAAGCATTAGGTGGAGAAGGGAAGAACTCTGGAAGATTCCTTAGATATAAAATCTGTAGAAA
AGAAAAGAGTTCCCTTCTCAAAAGTAGAGGCTGGACGGTATCGTAGAAAGGCCTAAATGGTTCTAATTCTGTATTCACAAGGTAAGCCTTACTTTTCATT
TTTAATAGTAGTATATGGAGTTATATATGATCAACAACTTTTTAGGTATAGATGTTTCAAAAGAACGCTTTGATGTTTCTCTCTCATTCATAAGTAAAAA
AGGAAAGCGTGAAACTAGGAAAAGGAAATTTAAAAATGATGATACTGGGTTTCAAGGTCTACTGAACTTTCTACAAAAACATAACGTAGAAGAAGTAAAA
GCTTGCATGGAATCCACTGGTTGTTATAGCGAAGCTTTGGCTGAGTTCCTCCACAACGCTGGATATTTCGTTAGTGTTGTAAACCCAGCTTGCATAAGAT
TTTATGCAAAAAGTAAGCTTACACGACAAAAGAATGACCAGACTGATGCAGAGATTATTGCAGATTATTGTCAAAGACAGGAACCTTCTCGTTGGACACC
ACCTTCTCCTGAAAAGAAAAAATTAAAACATCTTTATCGTTGCTCAAATGCGTTAAAGGATGAGTTAACATTAGCAAATAATCATTTAGAAAAGAAAGAG
AGACTGCCTAAAGAAGTTGCAAATGCTTGGGAAGACCTTGCAATGAACATAGAGCAAAAAATAGAAACAATAAAAAACTCCATACGCGAACTATTAAAAC
AACACAAAGAATTGTTGGAAGATTTTCAACTCCTATTAACTATTCCAGGAATAGGAGAGGAAACAGCAATAGCTATTTTAGCTGAAATTCCTGGTATAAA
AGCCTTTATAAATGCTAGGCAATTGGCAGCATATGCTGGAACTATACCACAAAATATAACATCAGGCTCATCCGTACATGCCAAGCCCAGATTAAGTAAA
ACCGGTTCACGAACATTACGTAAAGCAATGTACTTTCCTGCTATAGCAGCTAAAAAGCATAATCCTATCATTATGGCTTCTTGCGAAAGATTAAAAGAGA
AAGGCAAGCATGCTATGGCCATAGTTGGTGCTGCAATGCGTAAGTTACTTCATATAGTTTTTGGTGTTTTAAGTTCAAAAAAGGCCTTTGATCCAGATCA
TATCAAGAACTATAGGGCTAAAAGGTTAACTGAAGGTTTAGTACTTTAAAATCAAAAAATGCTTCTAATTCATCTTATGTAAAATGGCATCTTACACAAA
TTTATTGAATGTTGTTGGTTAGTGGATATGTTGATAAGTAAATTTCTGCTGTTTTATATGTAACTAATTTACTTATCAACATATCCACTAACTATAATCT
GTATACTGCTACACA
AGAAAAGAGTTCCCTTCTCAAAAGTAGAGGCTGGACGGTATCGTAGAAAGGCCTAAATGGTTCTAATTCTGTATTCACAAGGTAAGCCTTACTTTTCATT
TTTAATAGTAGTATATGGAGTTATATATGATCAACAACTTTTTAGGTATAGATGTTTCAAAAGAACGCTTTGATGTTTCTCTCTCATTCATAAGTAAAAA
AGGAAAGCGTGAAACTAGGAAAAGGAAATTTAAAAATGATGATACTGGGTTTCAAGGTCTACTGAACTTTCTACAAAAACATAACGTAGAAGAAGTAAAA
GCTTGCATGGAATCCACTGGTTGTTATAGCGAAGCTTTGGCTGAGTTCCTCCACAACGCTGGATATTTCGTTAGTGTTGTAAACCCAGCTTGCATAAGAT
TTTATGCAAAAAGTAAGCTTACACGACAAAAGAATGACCAGACTGATGCAGAGATTATTGCAGATTATTGTCAAAGACAGGAACCTTCTCGTTGGACACC
ACCTTCTCCTGAAAAGAAAAAATTAAAACATCTTTATCGTTGCTCAAATGCGTTAAAGGATGAGTTAACATTAGCAAATAATCATTTAGAAAAGAAAGAG
AGACTGCCTAAAGAAGTTGCAAATGCTTGGGAAGACCTTGCAATGAACATAGAGCAAAAAATAGAAACAATAAAAAACTCCATACGCGAACTATTAAAAC
AACACAAAGAATTGTTGGAAGATTTTCAACTCCTATTAACTATTCCAGGAATAGGAGAGGAAACAGCAATAGCTATTTTAGCTGAAATTCCTGGTATAAA
AGCCTTTATAAATGCTAGGCAATTGGCAGCATATGCTGGAACTATACCACAAAATATAACATCAGGCTCATCCGTACATGCCAAGCCCAGATTAAGTAAA
ACCGGTTCACGAACATTACGTAAAGCAATGTACTTTCCTGCTATAGCAGCTAAAAAGCATAATCCTATCATTATGGCTTCTTGCGAAAGATTAAAAGAGA
AAGGCAAGCATGCTATGGCCATAGTTGGTGCTGCAATGCGTAAGTTACTTCATATAGTTTTTGGTGTTTTAAGTTCAAAAAAGGCCTTTGATCCAGATCA
TATCAAGAACTATAGGGCTAAAAGGTTAACTGAAGGTTTAGTACTTTAAAATCAAAAAATGCTTCTAATTCATCTTATGTAAAATGGCATCTTACACAAA
TTTATTGAATGTTGTTGGTTAGTGGATATGTTGATAAGTAAATTTCTGCTGTTTTATATGTAACTAATTTACTTATCAACATATCCACTAACTATAATCT
GTATACTGCTACACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1020 bp | 340 aa | 227 | 1246 | + | No |
Chemistry : DEDD
ORF sequence :
MINNFLGIDVSKERFDVSLSFISKKGKRETRKRKFKNDDTGFQGLLNFLQKHNVEEVKACMESTGCYSEALAEFLHNAGYFVSVVNPACIRFYAKSKLTR
QKNDQTDAEIIADYCQRQEPSRWTPPSPEKKKLKHLYRCSNALKDELTLANNHLEKKERLPKEVANAWEDLAMNIEQKIETIKNSIRELLKQHKELLEDF
QLLLTIPGIGEETAIAILAEIPGIKAFINARQLAAYAGTIPQNITSGSSVHAKPRLSKTGSRTLRKAMYFPAIAAKKHNPIIMASCERLKEKGKHAMAIV
GAAMRKLLHIVFGVLSSKKAFDPDHIKNYRAKRLTEGLVL
QKNDQTDAEIIADYCQRQEPSRWTPPSPEKKKLKHLYRCSNALKDELTLANNHLEKKERLPKEVANAWEDLAMNIEQKIETIKNSIRELLKQHKELLEDF
QLLLTIPGIGEETAIAILAEIPGIKAFINARQLAAYAGTIPQNITSGSSVHAKPRLSKTGSRTLRKAMYFPAIAAKKHNPIIMASCERLKEKGKHAMAIV
GAAMRKLLHIVFGVLSSKKAFDPDHIKNYRAKRLTEGLVL
Blast result :
Comments
ISWen2 is 52% aa similar to ISNgo3.
References
1] Salzberg,S.L., Dunning Hotopp,J., Delcher,A.L., Pop,M., Eisen,M.B. and Nelson,W.C. (2005) Direct submission to Genbank