ISWen2

  • Family IS110
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) ISWpi7
Accession numberTranspositionOriginHost
NZ_AAGC01000200.1 ND Wolbachia endosymbiont
Wolbachia endosymbiont of Drosophila ananassae
DNA section
IS Length : 1415 bp

Ends


Left end : CCTTGTATCTTGAAAAAAGCATCTAGTGTTTTTAAGCTTAAGCATTAGGTGGAGAAGGGAAGAACTCTGGAAGATTCCTTAGATATAAAATCTGTAGAAA
Right end : TGGTTAGTGGATATGTTGATAAGTAAATTTCTGCTGTTTTATATGTAACTAATTTACTTATCAACATATCCACTAACTATAATCTGTATACTGCTACACA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

CCTTGTATCTTGAAAAAAGCATCTAGTGTTTTTAAGCTTAAGCATTAGGTGGAGAAGGGAAGAACTCTGGAAGATTCCTTAGATATAAAATCTGTAGAAA
AGAAAAGAGTTCCCTTCTCAAAAGTAGAGGCTGGACGGTATCGTAGAAAGGCCTAAATGGTTCTAATTCTGTATTCACAAGGTAAGCCTTACTTTTCATT
TTTAATAGTAGTATATGGAGTTATATATGATCAACAACTTTTTAGGTATAGATGTTTCAAAAGAACGCTTTGATGTTTCTCTCTCATTCATAAGTAAAAA
AGGAAAGCGTGAAACTAGGAAAAGGAAATTTAAAAATGATGATACTGGGTTTCAAGGTCTACTGAACTTTCTACAAAAACATAACGTAGAAGAAGTAAAA
GCTTGCATGGAATCCACTGGTTGTTATAGCGAAGCTTTGGCTGAGTTCCTCCACAACGCTGGATATTTCGTTAGTGTTGTAAACCCAGCTTGCATAAGAT
TTTATGCAAAAAGTAAGCTTACACGACAAAAGAATGACCAGACTGATGCAGAGATTATTGCAGATTATTGTCAAAGACAGGAACCTTCTCGTTGGACACC
ACCTTCTCCTGAAAAGAAAAAATTAAAACATCTTTATCGTTGCTCAAATGCGTTAAAGGATGAGTTAACATTAGCAAATAATCATTTAGAAAAGAAAGAG
AGACTGCCTAAAGAAGTTGCAAATGCTTGGGAAGACCTTGCAATGAACATAGAGCAAAAAATAGAAACAATAAAAAACTCCATACGCGAACTATTAAAAC
AACACAAAGAATTGTTGGAAGATTTTCAACTCCTATTAACTATTCCAGGAATAGGAGAGGAAACAGCAATAGCTATTTTAGCTGAAATTCCTGGTATAAA
AGCCTTTATAAATGCTAGGCAATTGGCAGCATATGCTGGAACTATACCACAAAATATAACATCAGGCTCATCCGTACATGCCAAGCCCAGATTAAGTAAA
ACCGGTTCACGAACATTACGTAAAGCAATGTACTTTCCTGCTATAGCAGCTAAAAAGCATAATCCTATCATTATGGCTTCTTGCGAAAGATTAAAAGAGA
AAGGCAAGCATGCTATGGCCATAGTTGGTGCTGCAATGCGTAAGTTACTTCATATAGTTTTTGGTGTTTTAAGTTCAAAAAAGGCCTTTGATCCAGATCA
TATCAAGAACTATAGGGCTAAAAGGTTAACTGAAGGTTTAGTACTTTAAAATCAAAAAATGCTTCTAATTCATCTTATGTAAAATGGCATCTTACACAAA
TTTATTGAATGTTGTTGGTTAGTGGATATGTTGATAAGTAAATTTCTGCTGTTTTATATGTAACTAATTTACTTATCAACATATCCACTAACTATAATCT
GTATACTGCTACACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1020 bp340 aa2271246+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MINNFLGIDVSKERFDVSLSFISKKGKRETRKRKFKNDDTGFQGLLNFLQKHNVEEVKACMESTGCYSEALAEFLHNAGYFVSVVNPACIRFYAKSKLTR
QKNDQTDAEIIADYCQRQEPSRWTPPSPEKKKLKHLYRCSNALKDELTLANNHLEKKERLPKEVANAWEDLAMNIEQKIETIKNSIRELLKQHKELLEDF
QLLLTIPGIGEETAIAILAEIPGIKAFINARQLAAYAGTIPQNITSGSSVHAKPRLSKTGSRTLRKAMYFPAIAAKKHNPIIMASCERLKEKGKHAMAIV
GAAMRKLLHIVFGVLSSKKAFDPDHIKNYRAKRLTEGLVL

 

Blast result :
Comments
ISWen2 is 52% aa similar to ISNgo3.
References
1] Salzberg,S.L., Dunning Hotopp,J., Delcher,A.L., Pop,M., Eisen,M.B. and Nelson,W.C. (2005) Direct submission to Genbank