ISGur2

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AAON01000019 ND Geobacter uraniumreducens
Geobacter uraniumreducens Rf4
DNA section
IS Length : 1057 bp

Ends


IR Length : 22/27

IRL : CCTGATTGGCCCTCATCTTCAGCCAATGGAGAAAAGGACGTATTCTGTCA
IRR : CCTGATTAGCGCCAATCTTCAGCCAGTCTGAGATTGTGCTCGGGATGCTT

Insertion site


Left flankDirect repeatRight flankDR Length
GGCAATTGATGCAATGTGGAATGAAAGCCCCTATT8

DNA sequence

CCTGATTGGCCCTCATCTTCAGCCAATGGAGAAAAGGACGTATTCTGTCACATGTCTAGAGTAGTGTCATAGTGAAATAAGCCAAGGAGGCCACTATGAC
GAAGAATCACTTTCAGTTTCAACAAGGGCTCAGCTTGAACGACTTTTTGTACAGCTATGGCACTGAAGAGCAATGTTCAGCGATCTTGGAAAAGAGCCGC
TGGCCCCAGGGTTTCAAATGTCCTTCCTGTCAGAGTACCAGCCACTGTGTAGTCTGGCATGCACAAGTCAAAACATTTCAGTGCAATCGGTGTCATACCC
AGACAACGCTGACCGCAGGCTCGATTTTTCACTCAACCAAGTTGCCGCTGGTCCAATGGTTTCAGGCCATGTACTTTCTCACGCAAACCAAGAACAATGT
CTCGGCTCTGGAGTTGAAGCGCCTGATCGGTGTTTGCTACAAAACCGCATGGCGTGTGAAGCACAAGCTCATGCAAGTTATGGTTGAACAGGAGCAGGAC
ACGATTTTGCTCGGCCGGGTCGAAGTAGATGATGCCTACCTGGGTGGAGAAAACCCAGGAGGCAAGGCCGGGCGAGGTTCGGAAAACAAGACGCCGTTTA
TTGCTGCTGTTGAAACCAATGAAAAGGGCCATCCACTTCGTGCTGTGTTTACAAAGGTGCCAGCCTTTAACCGCGAAGTAGTCACCGAATGGGCAAAACG
GTCACTGTCAGCTTCAGCGACAGTGGTAAGCGACGGACTGGCCTGCTTTCGTGCAGTTACCGAGGCTGGATGTTTCCATACCCCAACCATTGTCGGGAAG
AAACGCAAGAGTACCGACATTGTGTGTTTCAATTGGGTCAATACCATTCTCGGCAACCTCAAGACGTCGATCTCTGGAACGTACCATGCATTTGATTTCG
AAAAGTATGGAACTCGTTACCTGGCTGAGGTTCAATACCGATTCAACCGCCGGAAGGATCTGCGCGGCATGCTCTCGCGACTGATCTCGGCGGCGGCTAC
TACTGGCAAGCATCCCGAGCACAATCTCAGACTGGCTGAAGATTGGCGCTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
957 bp318 aa961052+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MTKNHFQFQQGLSLNDFLYSYGTEEQCSAILEKSRWPQGFKCPSCQSTSHCVVWHAQVKTFQCNRCHTQTTLTAGSIFHSTKLPLVQWFQAMYFLTQTKN
NVSALELKRLIGVCYKTAWRVKHKLMQVMVEQEQDTILLGRVEVDDAYLGGENPGGKAGRGSENKTPFIAAVETNEKGHPLRAVFTKVPAFNREVVTEWA
KRSLSASATVVSDGLACFRAVTEAGCFHTPTIVGKKRKSTDIVCFNWVNTILGNLKTSISGTYHAFDFEKYGTRYLAEVQYRFNRRKDLRGMLSRLISAA
ATTGKHPEHNLRLAEDWR

 

Blast result :
Comments
ISGur2 is 62% aa similar to ISKpn3
References
1] Larimer,F. and Land,M. (2006) Direct submission Genbank