ISTac2
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_002578 | ND | Thermoplasma acidophilum | Thermoplasma acidophilum DSM 1728 |
DNA section
IS Length : 1154 bp
Ends
IR Length : 13/23
IRL : GAATGTACGGACAAAGATATTTGAGATAGTACGGACGACAGCAAACGAGT
IRR : GAATGCGTAGTTGCCGTATTTTGTATATTCTAAAGGATATTTCCTCTCGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GAATGTACGGACAAAGATATTTGAGATAGTACGGACGACAGCAAACGAGTTCATGGAATCTCTGATAAAGGAGAAATACAGGCATTTTTAGAGAAGAATG
GTGGAAAACATAACGGATACTATGAAGGGGATCTCATAAGGAAGTATGGAAAAATAGATGGTCTGAATGTACAAAGGGACCGTAATGATGAATTCCATAC
ACTGTCCGGATAGTACCAGCAATCGATCGGAATAGAGGATCTGATATTATCGAGGTATTCCAAAGGCATATCCACAAGGAAGATGGCAGAGATACTTGAA
GAATTGTTACACAGTAAATACAGCAGATCGACCATATCGCGCATAACCGATATAACGTTACCGGAAATAGAGAAGTGAAAGAAGCGATCCCTTGATAAAA
GGTATATCGCCATATTCCTGGATGCCATGTTCTTCTCCCTTTGAAGAGATACAGTACAGAAGGAATGTACGATATTCGCCATGGGCATAAGCGAATCTAG
ACATTATGAGAGCCTAGGCTTTTACATTAATCCGGTGGAAAACCATATTGCCTACAGAAATGCCCTGATCGACCTCCATGAAAGAGGAGTGGAGTAACCC
CTTCTCTTCTTAGCGGACATTCTTCCGGGCATATAAGAGGAGATGAGGCAGATATATCCGATATCGGACTTTCAATTATGCACGGTACATGCATCAAGAA
ATTTTGAATCCAAGATACGGGTATCGGACAGGGATGAAGCGGACACCGATCTTAAGGGAATATTTCTCTCCGGATCGAAGGATGAATCGATCAGGAGATT
AAATGACTTCAAGAGCAAATGGTTACCGGAGTATATGAAACCAATTTACATCATAGGAAAGAATTTAGGAGTACTTCTAGAATACTGCAAATTCCCAAGG
TCCGTCAAAAGATCAATACATTCAACGAACATAATCGAGAGGATTAACAAGGAGATCAGGAGAAGGATCAAGATAATCGATTCACTTCCATCGGAAGAGA
ACATCATGAATATAACCTATCTGAGATTAGCCTAATTAAACGAGAAATGCTCTCTCCGATCAATAATGGGTTCTATGAGTGCAGGGACGTCATAACGGAC
ATGTTCGAGAGGAAATATCCTTTAGAATATACAAAATACGGCAACTACGCATTC
GTGGAAAACATAACGGATACTATGAAGGGGATCTCATAAGGAAGTATGGAAAAATAGATGGTCTGAATGTACAAAGGGACCGTAATGATGAATTCCATAC
ACTGTCCGGATAGTACCAGCAATCGATCGGAATAGAGGATCTGATATTATCGAGGTATTCCAAAGGCATATCCACAAGGAAGATGGCAGAGATACTTGAA
GAATTGTTACACAGTAAATACAGCAGATCGACCATATCGCGCATAACCGATATAACGTTACCGGAAATAGAGAAGTGAAAGAAGCGATCCCTTGATAAAA
GGTATATCGCCATATTCCTGGATGCCATGTTCTTCTCCCTTTGAAGAGATACAGTACAGAAGGAATGTACGATATTCGCCATGGGCATAAGCGAATCTAG
ACATTATGAGAGCCTAGGCTTTTACATTAATCCGGTGGAAAACCATATTGCCTACAGAAATGCCCTGATCGACCTCCATGAAAGAGGAGTGGAGTAACCC
CTTCTCTTCTTAGCGGACATTCTTCCGGGCATATAAGAGGAGATGAGGCAGATATATCCGATATCGGACTTTCAATTATGCACGGTACATGCATCAAGAA
ATTTTGAATCCAAGATACGGGTATCGGACAGGGATGAAGCGGACACCGATCTTAAGGGAATATTTCTCTCCGGATCGAAGGATGAATCGATCAGGAGATT
AAATGACTTCAAGAGCAAATGGTTACCGGAGTATATGAAACCAATTTACATCATAGGAAAGAATTTAGGAGTACTTCTAGAATACTGCAAATTCCCAAGG
TCCGTCAAAAGATCAATACATTCAACGAACATAATCGAGAGGATTAACAAGGAGATCAGGAGAAGGATCAAGATAATCGATTCACTTCCATCGGAAGAGA
ACATCATGAATATAACCTATCTGAGATTAGCCTAATTAAACGAGAAATGCTCTCTCCGATCAATAATGGGTTCTATGAGTGCAGGGACGTCATAACGGAC
ATGTTCGAGAGGAAATATCCTTTAGAATATACAAAATACGGCAACTACGCATTC
Protein section
ORF number : 0
Comments
ISTac2 is 67% aa similar to ISFac8 (BlastX result). The transposase is disrupted by stop codons.
References
1] Ruepp,A., Graml,W., Santos-Martinez,M.L., Koretke,K.K., Volker,C., Mewes,H.W., Frishman,D., Stocker,S., Lupas,A.N. and Baumeister,W. (2000) Nature 407 (6803), 508-513