ISNpu2

  • Family IS630
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AAAY02000032.1 ND Nostoc punctiforme
Nostoc punctiforme
DNA section
IS Length : 1220 bp

Ends


IR Length : 22/28

IRL : AGCTAATCGGCACATAAGTTGCATAATAAGAAGATGAAGCCGTTCAAAAG
IRR : AGCTAATCAGCATTTAAGCTGCAACATAGTGGATATTGCCTTTATTTCTT

Insertion site


Left flankDirect repeatRight flankDR Length
ATAACTAGAATACCAGTTAAATGCTGAA2

DNA sequence

AGCTAATCGGCACATAAGTTGCATAATAAGAAGATGAAGCCGTTCAAAAGCAACTATGCCGCCACCAGCCAAGAATTTTTTAACTACGGAACAAGTTAGT
AAGTTACAGCAAGCTCTAAAAGAGAGCGAGCTACCCCACGTCAGGGAAAGAATTCTAATTATTTTGCTCCAAAACGATGGGAAACCGCAACAGGAAACTG
CTAAATTTTTAGGCTGTTCGCGCAGAACAGTGGCATATTGGTGTATGCACGGTGATCCAGATGATCTAGAAACTCTACATAATAAAAGAGAGTACGAACA
TTATCGAAAAGCTACTCCTGAATATATTGAACTGTTATTAAAAACTGTTGACCAAGAGCCATCAGATTTAGGCTACGACTTTGGCAGATGGACGGCAGAA
AGATTAGCCACATATTTAACCCAGAAAACAGGGATTGATTTAAGTAGTTCTCAGTTAAGGAGGATATTAAAGCGAAAAAAGTATAGTTATATCTGGGCTA
AATATGACCTAGAAGATAAACAAAATCCAATTGAAAGAGCGAAGTTTAAAGAGAAACTTACTCAATATTTATCAATAGCACGAGAACAGCCAGAGCGTTT
TCAGGTATGGTTTTGGGACGTTAGCGTAGCGGGCGCGCGTACCCGCGCGACGAGCGGTTTTAGTTTACGTGTGATTCGATGCAAGGGATGGGGTAAAAAA
GGAAAACGCAAGAATGTTCCAGGAGAACGGCGTTGTGGTCGAGTAAATGTCATGGGGGCAATCAGAGAGCTAGACCGGAAACGCGTATGCTTTTTTGTAA
AAAAGGGAAACGCAGATATTTTTTATGAGCAATTACAACAATTAAATGGACTAATAAAACAAGAATGGGTTAGTATTGGAAACCGTTTTGAAGATTTTGC
GAAATCTGGCCCGAAGATTATTTTAATTTTAGATAATGCTAGTTTTCATAAGCGCAAAGATGTTCTAACTAAAATATCTCAAGAGTTTCCCAACTTTGTT
TTAGAGTTTTTACCTGCTTACAGCCCAGATTACAACATCATCGAATTAGTTTGGCATTCATGTAAAGAATATATTGCTCACCGTCTATTTAAATTAGTGG
ATGAATTAAAATCATTACTAGATAAGTTGTTAAATCAAGGTGAGTTAGTAATTAAGTGGCATCGGAAAATAAGAAATAAAGGCAATATCCACTATGTTGC
AGCTTAAATGCTGATTAGCT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1152 bp383 aa561207+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MPPPAKNFLTTEQVSKLQQALKESELPHVRERILIILLQNDGKPQQETAKFLGCSRRTVAYWCMHGDPDDLETLHNKREYEHYRKATPEYIELLLKTVDQ
EPSDLGYDFGRWTAERLATYLTQKTGIDLSSSQLRRILKRKKYSYIWAKYDLEDKQNPIERAKFKEKLTQYLSIAREQPERFQVWFWDVSVAGARTRATS
GFSLRVIRCKGWGKKGKRKNVPGERRCGRVNVMGAIRELDRKRVCFFVKKGNADIFYEQLQQLNGLIKQEWVSIGNRFEDFAKSGPKIILILDNASFHKR
KDVLTKISQEFPNFVLEFLPAYSPDYNIIELVWHSCKEYIAHRLFKLVDELKSLLDKLLNQGELVIKWHRKIRNKGNIHYVAA

 

Blast result :
Comments
ISNpu2 is 37% aa similar ISPlu16.
References
1] NCBI Microbial Genomes Annotation Project (2004) Direct submission to Genbank.