ISBce2

  • Family IS4
  • Group IS231
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NC_003909 ND Bacillus cereus
Bacillus cereus ATCC10987
DNA section
IS Length : 1646 bp

Ends


IR Length : 22

IRL : CATCCATCAACTTAAGGATTTAGACTATTCTTAAACTTAAAAGCACGTTA
IRR : CATCCATCAACTTAACGTATATTTTTATACAAAATGCGGTCTTTCCACGT

Insertion site


Left flankDirect repeatRight flankDR Length
CTGTTCACCTTGTGAATTTACCCCATAATCTAGGT15

DNA sequence

CATCCATCAACTTAAGGATTTAGACTATTCTTAAACTTAAAAGCACGTTACTATTCTCTTATGTTAATGAGAAAGGGTGACGTGCTTTTTATGAATATGC
ATCAAAAACAAGAGCTGTCTTTATTTGCCGAAGAGTTATATCGATATATGTCTCCCGCTACACTTAATCAATTAGCTATAGAAGCAGGTGGAATGAAACG
AAAACGTAAGTGCCATGGGCACCATTTTTTATCTTTGTGTGTATGGTTAAATCAACAAATCGCTACAACCTCTCTTACTCAACTTTGTAGTCAATTAGAA
ACTTCAACAGGAATTTTATTAAGTCCTGAGGGACTGAATCGACGATTTAACTCGGCTTCTGTAGCCTTCTTTCGAAATGTATTTACTACACTTCTACAAG
CTAAAATTGGAGGATCATCTACAATTTCTCATTCTCTTTCTGCTTACTTTAAGCGGATTCGCATCCTTGATTCTACAACCTTTCAAGTTCCAGATCGATT
CGCAGCTACTTATCCTGGTGCCGGAGGCTGTAGTCATACAGCTGGTGTGAAAATTCAATTAGAGTATGACTTGTTGAGCGGAGAGTTTTCTGATGTGAAA
ATTGAACCAGGAAAACGAAGTGATCAGGCATATGGGGCGACTCGAATGGACATGACACAAAAGAATGAACTATATATTCGTGACTTAGGGTATTTTCGTT
TACAAGACTTTAAATCGATCCAAGATAAGGAAGGGTATTATTTATCGCGTCTTAAATTACCAACTAAAATATATAGAAAAGAATTCGAAACAGTGGTATT
TAAAACAAAACCTGCTCAATTGAGACCGGTATATATACAAATTCATTTGGAAGACATCATGAACCAATTACAACCTGGCCAAGTGTATGAATTACATGAT
GTATATGTAGGGAGCAAAGACAAACTACCCACTCGCATTGTGGTTTATAGATGTACAGAGGAGCAAAAACAGAAACGTCTACATGATCGAGCTATTCGTG
AAAAGAAAAAAGGGATTACATATACAGAGCGTACGAAACTTTTACAAGGAATTACGGTATATATGACAAACATTCCTACGGAATGGGTACCGAAAGAGAA
AATCTATGATTTATATTCACTGCGTTGGCAAATTGAGCTGTTATTTAAAATATGGAAATCTTGGTTTCGAATTCATCGTTGTAAATCTATTAAACAAGAG
CGATTAGAATGCCACCTTTATGGACAACTCATTAGTATCCTATTATGTTCTTCTACTATGTTTAAAATGAGAGAACTCCTGTTACGTAAGAAACAGAAAG
AACTAAGTGAATATAAAGCGATGTACATAATTAAAGATTATTTCTTACTTTTTCATCAAGCACTACATAAAAACACCCAAGAATTATCAAAGATTCTCCT
TCGTCTGTTTAACCTCCTACAGCGAAACGGACGAAAATCTCACAGATATGAGAAAAAAACAGTCTTTGATATTTTAGGTGTTGTGTATGAGTATACCACT
TCTGCCCATCAGGTAGCATAGCGAAAAATTTGAAACCCGTCAGGGTTTATTTGATGTGCCTACTTTTATAACATCTATAAAAGATAATAAAAAACTACGT
GGAAAGACCGCATTTTGTATAAAAATATACGTTAAGTTGATGGATG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1428 bp476 aa911518+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNMHQKQELSLFAEELYRYMSPATLNQLAIEAGGMKRKRKCHGHHFLSLCVWLNQQIATTSLTQLCSQLETSTGILLSPEGLNRRFNSASVAFFRNVFTT
LLQAKIGGSSTISHSLSAYFKRIRILDSTTFQVPDRFAATYPGAGGCSHTAGVKIQLEYDLLSGEFSDVKIEPGKRSDQAYGATRMDMTQKNELYIRDLG
YFRLQDFKSIQDKEGYYLSRLKLPTKIYRKEFETVVFKTKPAQLRPVYIQIHLEDIMNQLQPGQVYELHDVYVGSKDKLPTRIVVYRCTEEQKQKRLHDR
AIREKKKGITYTERTKLLQGITVYMTNIPTEWVPKEKIYDLYSLRWQIELLFKIWKSWFRIHRCKSIKQERLECHLYGQLISILLCSSTMFKMRELLLRK
KQKELSEYKAMYIIKDYFLLFHQALHKNTQELSKILLRLFNLLQRNGRKSHRYEKKTVFDILGVVYEYTTSAHQVA

 

Blast result :
Comments
ISBce2 is 96% aa similar to IS231S. There are two complet copies and one partial copy in Bacillus cereus ATCC10987 genome.
References
1] Rasko,D.A., Ravel,J., Okstad,O.A., Helgason,E., Cer,R.Z., Jiang,L., Shores,K.A., Fouts,D.E., Tourasse,N.J., Angiuoli,S.V., Kolonay,J., Nelson,W.C., Kolsto,A.-B., Fraser,C.M. and Read,T.D. (2004) Nucleic Acids Res. 32 (3), 977-988