ISBce2
- Family IS4
- Group IS231
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_003909 | ND | Bacillus cereus | Bacillus cereus ATCC10987 |
DNA section
IS Length : 1646 bp
Ends
IR Length : 22
IRL : CATCCATCAACTTAAGGATTTAGACTATTCTTAAACTTAAAAGCACGTTA
IRR : CATCCATCAACTTAACGTATATTTTTATACAAAATGCGGTCTTTCCACGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTGTTCACCT | TGTGAATTTACCCCA | TAATCTAGGT | 15 |
DNA sequence
CATCCATCAACTTAAGGATTTAGACTATTCTTAAACTTAAAAGCACGTTACTATTCTCTTATGTTAATGAGAAAGGGTGACGTGCTTTTTATGAATATGC
ATCAAAAACAAGAGCTGTCTTTATTTGCCGAAGAGTTATATCGATATATGTCTCCCGCTACACTTAATCAATTAGCTATAGAAGCAGGTGGAATGAAACG
AAAACGTAAGTGCCATGGGCACCATTTTTTATCTTTGTGTGTATGGTTAAATCAACAAATCGCTACAACCTCTCTTACTCAACTTTGTAGTCAATTAGAA
ACTTCAACAGGAATTTTATTAAGTCCTGAGGGACTGAATCGACGATTTAACTCGGCTTCTGTAGCCTTCTTTCGAAATGTATTTACTACACTTCTACAAG
CTAAAATTGGAGGATCATCTACAATTTCTCATTCTCTTTCTGCTTACTTTAAGCGGATTCGCATCCTTGATTCTACAACCTTTCAAGTTCCAGATCGATT
CGCAGCTACTTATCCTGGTGCCGGAGGCTGTAGTCATACAGCTGGTGTGAAAATTCAATTAGAGTATGACTTGTTGAGCGGAGAGTTTTCTGATGTGAAA
ATTGAACCAGGAAAACGAAGTGATCAGGCATATGGGGCGACTCGAATGGACATGACACAAAAGAATGAACTATATATTCGTGACTTAGGGTATTTTCGTT
TACAAGACTTTAAATCGATCCAAGATAAGGAAGGGTATTATTTATCGCGTCTTAAATTACCAACTAAAATATATAGAAAAGAATTCGAAACAGTGGTATT
TAAAACAAAACCTGCTCAATTGAGACCGGTATATATACAAATTCATTTGGAAGACATCATGAACCAATTACAACCTGGCCAAGTGTATGAATTACATGAT
GTATATGTAGGGAGCAAAGACAAACTACCCACTCGCATTGTGGTTTATAGATGTACAGAGGAGCAAAAACAGAAACGTCTACATGATCGAGCTATTCGTG
AAAAGAAAAAAGGGATTACATATACAGAGCGTACGAAACTTTTACAAGGAATTACGGTATATATGACAAACATTCCTACGGAATGGGTACCGAAAGAGAA
AATCTATGATTTATATTCACTGCGTTGGCAAATTGAGCTGTTATTTAAAATATGGAAATCTTGGTTTCGAATTCATCGTTGTAAATCTATTAAACAAGAG
CGATTAGAATGCCACCTTTATGGACAACTCATTAGTATCCTATTATGTTCTTCTACTATGTTTAAAATGAGAGAACTCCTGTTACGTAAGAAACAGAAAG
AACTAAGTGAATATAAAGCGATGTACATAATTAAAGATTATTTCTTACTTTTTCATCAAGCACTACATAAAAACACCCAAGAATTATCAAAGATTCTCCT
TCGTCTGTTTAACCTCCTACAGCGAAACGGACGAAAATCTCACAGATATGAGAAAAAAACAGTCTTTGATATTTTAGGTGTTGTGTATGAGTATACCACT
TCTGCCCATCAGGTAGCATAGCGAAAAATTTGAAACCCGTCAGGGTTTATTTGATGTGCCTACTTTTATAACATCTATAAAAGATAATAAAAAACTACGT
GGAAAGACCGCATTTTGTATAAAAATATACGTTAAGTTGATGGATG
ATCAAAAACAAGAGCTGTCTTTATTTGCCGAAGAGTTATATCGATATATGTCTCCCGCTACACTTAATCAATTAGCTATAGAAGCAGGTGGAATGAAACG
AAAACGTAAGTGCCATGGGCACCATTTTTTATCTTTGTGTGTATGGTTAAATCAACAAATCGCTACAACCTCTCTTACTCAACTTTGTAGTCAATTAGAA
ACTTCAACAGGAATTTTATTAAGTCCTGAGGGACTGAATCGACGATTTAACTCGGCTTCTGTAGCCTTCTTTCGAAATGTATTTACTACACTTCTACAAG
CTAAAATTGGAGGATCATCTACAATTTCTCATTCTCTTTCTGCTTACTTTAAGCGGATTCGCATCCTTGATTCTACAACCTTTCAAGTTCCAGATCGATT
CGCAGCTACTTATCCTGGTGCCGGAGGCTGTAGTCATACAGCTGGTGTGAAAATTCAATTAGAGTATGACTTGTTGAGCGGAGAGTTTTCTGATGTGAAA
ATTGAACCAGGAAAACGAAGTGATCAGGCATATGGGGCGACTCGAATGGACATGACACAAAAGAATGAACTATATATTCGTGACTTAGGGTATTTTCGTT
TACAAGACTTTAAATCGATCCAAGATAAGGAAGGGTATTATTTATCGCGTCTTAAATTACCAACTAAAATATATAGAAAAGAATTCGAAACAGTGGTATT
TAAAACAAAACCTGCTCAATTGAGACCGGTATATATACAAATTCATTTGGAAGACATCATGAACCAATTACAACCTGGCCAAGTGTATGAATTACATGAT
GTATATGTAGGGAGCAAAGACAAACTACCCACTCGCATTGTGGTTTATAGATGTACAGAGGAGCAAAAACAGAAACGTCTACATGATCGAGCTATTCGTG
AAAAGAAAAAAGGGATTACATATACAGAGCGTACGAAACTTTTACAAGGAATTACGGTATATATGACAAACATTCCTACGGAATGGGTACCGAAAGAGAA
AATCTATGATTTATATTCACTGCGTTGGCAAATTGAGCTGTTATTTAAAATATGGAAATCTTGGTTTCGAATTCATCGTTGTAAATCTATTAAACAAGAG
CGATTAGAATGCCACCTTTATGGACAACTCATTAGTATCCTATTATGTTCTTCTACTATGTTTAAAATGAGAGAACTCCTGTTACGTAAGAAACAGAAAG
AACTAAGTGAATATAAAGCGATGTACATAATTAAAGATTATTTCTTACTTTTTCATCAAGCACTACATAAAAACACCCAAGAATTATCAAAGATTCTCCT
TCGTCTGTTTAACCTCCTACAGCGAAACGGACGAAAATCTCACAGATATGAGAAAAAAACAGTCTTTGATATTTTAGGTGTTGTGTATGAGTATACCACT
TCTGCCCATCAGGTAGCATAGCGAAAAATTTGAAACCCGTCAGGGTTTATTTGATGTGCCTACTTTTATAACATCTATAAAAGATAATAAAAAACTACGT
GGAAAGACCGCATTTTGTATAAAAATATACGTTAAGTTGATGGATG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1428 bp | 476 aa | 91 | 1518 | + | No |
Chemistry : DDE
ORF sequence :
MNMHQKQELSLFAEELYRYMSPATLNQLAIEAGGMKRKRKCHGHHFLSLCVWLNQQIATTSLTQLCSQLETSTGILLSPEGLNRRFNSASVAFFRNVFTT
LLQAKIGGSSTISHSLSAYFKRIRILDSTTFQVPDRFAATYPGAGGCSHTAGVKIQLEYDLLSGEFSDVKIEPGKRSDQAYGATRMDMTQKNELYIRDLG
YFRLQDFKSIQDKEGYYLSRLKLPTKIYRKEFETVVFKTKPAQLRPVYIQIHLEDIMNQLQPGQVYELHDVYVGSKDKLPTRIVVYRCTEEQKQKRLHDR
AIREKKKGITYTERTKLLQGITVYMTNIPTEWVPKEKIYDLYSLRWQIELLFKIWKSWFRIHRCKSIKQERLECHLYGQLISILLCSSTMFKMRELLLRK
KQKELSEYKAMYIIKDYFLLFHQALHKNTQELSKILLRLFNLLQRNGRKSHRYEKKTVFDILGVVYEYTTSAHQVA
LLQAKIGGSSTISHSLSAYFKRIRILDSTTFQVPDRFAATYPGAGGCSHTAGVKIQLEYDLLSGEFSDVKIEPGKRSDQAYGATRMDMTQKNELYIRDLG
YFRLQDFKSIQDKEGYYLSRLKLPTKIYRKEFETVVFKTKPAQLRPVYIQIHLEDIMNQLQPGQVYELHDVYVGSKDKLPTRIVVYRCTEEQKQKRLHDR
AIREKKKGITYTERTKLLQGITVYMTNIPTEWVPKEKIYDLYSLRWQIELLFKIWKSWFRIHRCKSIKQERLECHLYGQLISILLCSSTMFKMRELLLRK
KQKELSEYKAMYIIKDYFLLFHQALHKNTQELSKILLRLFNLLQRNGRKSHRYEKKTVFDILGVVYEYTTSAHQVA
Blast result :
Comments
ISBce2 is 96% aa similar to IS231S. There are two complet copies and one partial copy in Bacillus cereus ATCC10987 genome.
References
1] Rasko,D.A., Ravel,J., Okstad,O.A., Helgason,E., Cer,R.Z., Jiang,L., Shores,K.A., Fouts,D.E., Tourasse,N.J., Angiuoli,S.V., Kolonay,J., Nelson,W.C., Kolsto,A.-B., Fraser,C.M. and Read,T.D. (2004) Nucleic Acids Res. 32 (3), 977-988