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Sequence File (FASTA format)     



Transposon
Name: Tn6133
Family: Tn554
Evidence of Transposition: Yes
 Host     

Host Organism:Staphylococcus aureus subsp. aureus ST398 Molecular Source:chromosome
Place of Origin:Bern, Switzerland Date of Isolation:2011
Other Geographic Information:pigs

 Map     



 Sequence     
DNA SequenceLength  11481 
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GATGTATTAA CCATAGTATA ATAAATAATA GTAGTTAAAG TAGTTTAAGA GGAGATATTA AAGGGATATT TTACTTTAAA TAAAAATTAA CAAGGTTTAT 100
AATTTGTAGT AGTTAAAGTA TTTAAAGAGG TGGGAACATG TGAAGGTTCA AAGGATAGAA GTGGAGAATA AGCCGTATCC ATTGTATTTA TTACTAGATA 200
AAGAATACCA GCTAATAGAA CCAGTAATGA AATTTATTAA ATACTTAGAT AATACTGGTA AGTCTCCTAA TACCATTAAG GCATACTGCT ATCATTTAAA 300
GTTGCTGTAC GAGTTCATGG AACAGAGAGG TGTTATTCTT AATGATATTA ACTTTGAGTT GTTAGCAGAC TTCGTAGGTT GGTTGAGATA TCCTTCAGCA 400
TCAAATGTAA TTGATCTTCA GTCAAAAAAA GCCATAAGAG AAGAAACGAC AGTGAATACA ATTTTAAATG TAGTTATGAG TTTTCTTGAT TATTTAAGTA 500
GATTAGGAGA ATTTAAATCA ATTGATGTAT TTAAACAAGC AAAGGGAAGA AATTTCAAAG GATTTTTACA TCATGTTAAT AAGGGTAGAT ACCAAAAGAA 600
TGTCTTAAAG TTAAGGGTTA AAAAGAAACA GATAAGAACA TTGAGATCAA AGGAAGTTAA GCAAATTATT GATGCTTGTC ATACGAAAAG AGATAAATTA 700
ATTTTAATGC TTATGTATGA GGGTGGTTTA AGAATCGGTG AAGTGTTATC GCTTAGGCTT GAAGATATTG TCACTTGGGA CAATCAAATC CATTTAACAC 800
CTAGAGATGT TAATGTTAAT GAAGCTTATA TTAAATTAAG GAAGGAAAGA ACAATACATG TGAGTAAAGA ACTTATGTCA CTTTATACAG ATTACTTGAT 900
ATATGAGTAT AGTGAGGAAT TGGAGCATGA TTATGTTTTT ATTTCCTTAA AAGAAGGCTA TTTTGGGAAA CCACTAAAGT ACCAAAGTGT TCTTGATCTA 1000
GTTAGAAGAA TAGTTAAAAG GACTGGAATA GAATTTACAT CACATATGCT TCGCCACACT CACGCAACGC AGCTAATTAG GGAAGGATGG GATGTTGCGT 1100
TCGTTCAAAA GAGATTAGGT CACGCACATG TTCAGACAAC GTTAAATACC TATGTTCATC TTTCAGATCA GGATATGAAA AATGAGTTTA ATAAATACCT 1200
CGAGAGAAAG GAGCATAAGA AATGAATGCT TCTAGTAAAA GGAAAATTAT TAGTCAGAGT GAGATTAGCA AAAAAATAGC TGTAATGAAT GAAGAAATGC 1300
AGGGGTTTTG GGCTAATAAT AGTTGGGATA TAAGAAAATG TCCACATCCT TCTGCCATAG AATTAAGTAA GAATCCTGCT TTAAGGAATC GTTGGGTTCG 1400
TTTTGAACGT GTTAAAAATC TGTGGTTAAG AACAGAATTG AAATATTTTT ATTTTTACCA TTTAAACAAT GGAATATGGA ATGCAAAAAC TGTCTGGATT 1500
AGAAAAGGAA CAGTAATTAA TAAAATGTTA GATTTCTTAG ATTTAAAGTA TCCTAGCATT ACTTCAATTA CTGAAGTTCC TATTGAAAAA GCAATGACGG 1600
AGTATAGAAC TTATTTGACA AAACGGGGTG TTAGAATTAC CACTACTAAT TATAAGATTA CTGCTAATCA AGAAAAAACA CCTGTAAAAG CTAATTCCTA 1700
CTATGTTACT AATCTAAAAC AATTTATGGA GTTTTATGAG AACTTTTATT TTGATGGAGA GGAGTGGGAT AAAGACGTTT GGGATAGACG TAACTTACCT 1800
TTGCCAGATG ATAAGGTTAA CCCAACACAA TATGAATATA CAATTAACTT TAAAGGGTTT CGGAATACAT ATTTTAAACA ACTTGTAAAA AGATATTGTA 1900
AGTTGAGATT GAACGTGGAT AGCTTTTCCT ATGTAAGTGA TATTGCCCAA AGACTTAAAG AGTTCTTTAA TTTTCTGGAC ATGAAATTTA AACAAGTTCA 2000
GAGAGTACAC CAATTAACGA GAGTGGAAAT TGAAGCATAT TTAAGTGAAC TAAACATGAT GGGAATAAAA CCTAGTACAA TAACTGGGAG GATCTCTATA 2100
TTGGAAGGAC TATTTAGTAC CCTTCTTAGG CTAGAATGGG ATGATGTTCC TTCCAAAATA TTAATTTATT CTGAGGACTA TCCGAAAATA CCAAGAGCAA 2200
AACCACGCTT TATAGATGAA TTCGTCCTAG AGCAATTGAA CAGTCATCTT GATAAATTAC CCGAATATAT AGCTACGATG ACTATGATTG TTCAAGAATG 2300
TGGAATGAGG ATAAGTGAAT TGTGCACCTT GAAAAAAGGC TGTCTATTAG AGGACAAAGA TGGAGATTTC TTTTTAAAGT ATTATCAATG GAAAATGAAA 2400
AAGGAGCATA TAGTTCCAAT ATCTAAAGAG GTAGCTTTAC TTATTAAAGT TCGGGAAGAT AAAGTTTCAG AGGAATTTCC AGATAGTGAA TACCTCTTTC 2500
CAAGAAAAGA TGGATCGCCA TTAAAACAAG AAACATTTAG AGGTGAGTTA AATAAATTAG CTTATGAGCA AAATATAGTG GATAAATCAG GTGAGATTTA 2600
TAGATTCCAT GCCCATGCCT TTCGCCATAC AGTAGGAACA AGAATGATTA ACAACGGGAT GCCCCAGCAT ATTGTGCAGA AATTTTTGGG GCATGAAAGC 2700
CCAGAAATGA CAAGCAGATA CGCTCATATC TTTGATGAAA CTCTAAAAAA TGAATTTACT AAATTTCAGG AAAAACTGGT TACCAATAAT GGAGATGTGC 2800
TTGATCTAGA TGAAGATAAT GAAGTCGATG ATGTAGAGCT TCAATGGTTC AAGAAAAATA TAAATGCACA AGTGCTTCCA AATGGTTATT GTAGATTGCC 2900
AGTAGTAGCA GGTGGTTGTC CACATGCGAA TGCATGCTTA GATTGCACTC ACTTCTGTAC CAGTAAGCAA TTCTTACCAC AGCACGAAGA ACAGTTAGAG 3000
CGTACAGAAG AGTTATTAGC CATAGCTAAG GATAAACAAT GGCAAAGACA AGTAGAGACT AATAGCCGTG TTAAAGAGCG TTTAGAACAA ATCATTGGAA 3100
GTTTGACGGG GTAATTATCA ATGGATAAAC AAGTTAGAAA TACAACAGAA ATTGTACGTT TGGCGAAGCA GAAATCAAAA AAGACAAGGG AAAAAGTAGA 3200
CAAAGCGATT TCTAAATTTT CGATTGAAGG TAAAGTTATT AATTTTAATT CAATAGCAAA GGAAGCTAAT GTTTCTAAAT CATGGCTTTA TAAGGAACAC 3300
GATATTAGGC AAAGAATCGA ATCCCTTCGT GAGCGTCAAA TAACAGCAAA TGTAGTCTCA AAACCCAAGA AAAGTTCTCG TTCGGAGGAA ATCCTTATTA 3400
AAACCTTAAA AAGAAGAGTA ATGGAATTAG AAAAAGAAAA TAAAAAATTA CAGAACCAAA TTCAAAAATT ATATGGAGAT CTGTATAATA AAGAATAATT 3500
ATTAATCTGT AGACAAATTG TGAAAGGATG TACTTAAACG CTAACGGTCA GCTTTATTGA ACAGTAATTT AAGTATATGT CCAATCTAGG GTAAGTAAAT 3600
TGAGTATCAA TATAAACTTT ATATGAACAT AATCAACGAG GTGAAATCAT GAGCAATTTG ATTAACGGAA AAATACCAAA TCAAGCGATT CAAACATTAA 3700
AAATCGTAAA AGATTTATTT GGAAGTTCAA TAGTTGGAGT ATATCTATTT GGTTCAGCAG TAAATGGTGG TTTACGCATT AACAGCGATG TAGATGTTCT 3800
AGTCGTCGTG AATCATAGTT TACCTCAATT AACTCGAAAA AAACTAACAG AAAGACTAAT GACTATATCA GGAAAGATTG GAAATACGGA TTCTGTTAGA 3900
CCACTTGAAG TTACGGTTAT AAATAGGAGT GAAGTTGTCC CTTGGCAATA TCCTCCAAAA AGAGAATTTA TATACGGTGA GTGGCTCAGG GGTGAATTTG 4000
AGAATGGACA AATTCAGGAA CCAAGCTATG ATCCTGATTT GGCTATTGTT TTAGCACAAG CAAGAAAGAA TAGTATTTCT CTATTTGGTC CTGATTCTTC 4100
AAGTATACTT GTCTCCGTAC CTTTGACAGA TATTCGAAGA GCAATTAAGG ATTCTTTGCC AGAACTAATT GAGGGGATAA AAGGTGATGA GCGTAATGTA 4200
ATTTTAACCC TAGCTCGAAT GTGGCAAACA GTGACTACTG GTGAAATTAC CTCGAAAGAT GTCGCTGCAG AATGGGCTAT ACCTCTTTTA CCTAAAGAGC 4300
ATGTAACTTT ACTGGATATA GCTAGAAAAG GCTATCGGGG AGAGTGTGAT GATAAGTGGG AAGGACTATA TTCAAAGGTG AAAGCACTCG TTAAGTATAT 4400
GAAAAATTCT ATAGAAACTT CTCTCAATTA GGCTAATTTT ATTGCAATAA CAGGTGCTTA CTTTTAAAAC TACTGATTTA TTGATAAATA TTGAACAATT 4500
TTTGGGAAGA ATAAAGCGTC CTCTTGTGAA ATTAGAGAAC GCTTTATTAC TTTAATTTAG TGAAACAATT TGTAACTATT GAAAATAGAA AGAAATTGTT 4600
CCTTCGATAG TTTATTAATA TTAGTGACAT TTGCATGCTT CAAAGCCTGT CGGAATTGGT TTTTAGTGAA AAGAACACGA TATTCACGGT TTACCCACTT 4700
ATAAACAAAA GATCGATACT TTTTGTAGTC CTTCTTTGAA ATCAATGGTT GATGTCGTTC AAGAACAATC AATACAGAGT CTACACTTGG CTTAGGATGA 4800
AAATATAGTG GTGGTACTTT TTTGAGCATT TTTATATCCA TCTCCACCAT TAATAGTAAA CCCAAAGCTC GTTGCAGATT TTGCAATCTT TTCGCAAATC 4900
CCTTCTCAAC GATAAGATAG CTATATTTAG CCTGACTTTC AAAGGTAATT CTTTTGACAA TATCCGTACT GATGTTATAA GGAATATTAC CATATATCTT 5000
ATAGTTTATA TGTTTTGGGA AGGAAAATTT TAGAATATCC GTTTGAATCA CTTTTATATT CTCAGAGGGG TTTACCGCTT CTTTAGTCAC TTGACATAAG 5100
CCTCCATCAA TTTCTATAGC AGTAACTGAT CGACTCATTT TGACTAGCTC TTTGGTAAAA TGTCCTTTTC CTGATCCGAT TTCTATTACG TTGTCTTGTT 5200
TACTGATATT CGTGTGATTC AATATTTCTT TTACATGCTT TTTAGAAGTA ATAAAATTTT GCGTGTCTTT AGGGTTTTTC TGGTTCATTA TAACCTTCTC 5300
CTTACTGGTT ATAATGAACT GACATTAAGC GTTCATTATA ACCAATTAAT TTTGATTTGG TTGATAACGA ACTTTATTAA TAACAAATAT AGAAAAAGTA 5400
CCCATACTTT TATCTCCTTT CCATTTTTTT CATTATGAAT GAGATAAAGT AATTTCTACT ACTGCGATAC TGGTGCACAT AATTGAAACC TCCTTATGTA 5500
ACTGAATATG ATTGTATCAT CTTTTCATTT TAGAATAAAC CTTTATATGT AATTTTGCAC TTGACACTTC AGATGGACGT TTTCTTCAAA ATAATATGTT 5600
TTGAAACTTG ATAAGAGAAG CCACTGTCTT TACTAAAAAG TAAAGGCTGC GATAAAGGAC AGTGACTTTA ATAAAGTTGC ACTGTTGTAT TGTCTTTGGA 5700
TAAAATTGTC TAAAGGGAAG TTTTATCCCC AACGAAAAAA CATCTAAGAT TGAATGTGCG GAATGTGGCG ATACCTTTAA AAGAAGAATT CATACTTCTA 5800
CGCATAGAAA ATATATTGCT TGGTGCTGTT CAACACACAT CAAAAACAGA GATGAATGTT CGATGCTTTT CATTAAGGAA GAACGAATTC ATCAAGCTTT 5900
TATTACGATG ATGAACAAAT TAAAGTTTGG TTATAGTTAT GTATTAATCC CACTATCTAA ACAATTAGAA ACGTCAAATC AAGATGAAGA CTTTCAAATG 6000
ATTACGGAAA TAGAAAAGCA AATCGAAGTT ACAAAAGAAG AACTAAATAC ATTAATTCAA TTAATGACAA AAGGGTTTTT AGAACCAGCT ATTTTCAATC 6100
AACAGAAAAT CGAATTGTCT CAAAGACACA TGAAATTAAA AGAAGAAAGA GAGCAGTTAC TGTATTTAAT CAATGATGGT TCAAATCAGC TAAGTGAAGT 6200
GAAGCGGATC ATTAAATATT TTAAGCAAGT AAATTTCATA GCCGCATTTG ATGAAGAAAC CTTTCAAGAT ATTGTAAGAA AGGTAATTGT GTATTCACCT 6300
AATGAAATAG GATTTCATTT GAAATGTAGC ATTACACTTA AAGAAAGGAT TAATCGCTAA TGGCACATAC ACCTTTTGGA TATGCAATGG TAAACGGAAA 6400
AATTGAAGTT CAAGCCAAAG AAGCTGAGCA ATTAAAGCTT TTAATCGCAT CATACTTATC GGGCCAATCT TTAGCTAATG CAGCAAGGGA ATCTGGTATT 6500
AATCGGTCAC ATGGCGGAAT TACTAGAATA TTAACAGATG AAAGGTATCT AGGAAATGGA TTGTTTCCGA GATTAATTTC AAAAGAACAA TTTGAACAAT 6600
TAAAAAACGA AAGATTTAAA CGAGCGAAAA AACTAGGACG ATTAAATAGA ACGAAAGAGG AAGAGTCATT TACACCATGT TTTGAATTTA CGATCGGAGA 6700
AGTGGAAGAC AAATACGACA ATCCAATTAA ACAAGCAGAA TATGTATACA GCTTAATTAA AGAAGAGGTG ACTTAAAATG GCTTTAGCAA GAAGCGTAAC 6800
AGTTATCCCA GCTAGGAGAA GAACGAGAAA TGTTGATGCA GAGAAAAAGG AAAAATTAAA AGTGGCAGCT TATTGTCGTG TATCAACAGA TAGCGAAGAA 6900
CAAGCAACTA GTTATGAAGT TCAAGTGGAA CACTACACTA CCTATATTCA GAACAATCCT GAATGGGAGT TGGCAGGCAT TTATGCGGAC GATGGAATAT 7000
CTGGGACAAA TACCAAAAAG CGTGAACAGT TTAATAAGAT GATTGAGGAT AGCATGAATG GAAAAATCGA CATGATCATC ACAAAATCCA TCAGTCGATT 7100
TGCGAGAAAC ACGCTGGACT GTTTAAAATA CATCAGGCAA TTAAAAGATA AAGAAATACC TGTGTTTTTT GAAAAAGAAA ACATCAATAC AATGGATGCA 7200
AAAGGTGAAA TTATGCTCAC CATCATGGCA TCCCTAGCAC AACAAGAAAG TCAGTCACTT AGCCAAAACG TAAAACTAGG AATACAATAC CGATACCGGC 7300
AAGGTGAGGT GCAAGTGAAC CATAATCGCT TTCTAGGCTA TACCAAAGAT GAGAACAACA AACTAGTCAT TAACCCAGAA CAAGCGAAAA TCGTTAAACG 7400
GATTTACCGA GAATATTTAG AAGGAGCAAG TTTAGTTCAA ATAGCACGTG GACTTGAAGC TGATGAGATA TTAACCGCAG CTAAACGAAC AAAGTGGCGG 7500
CCAGAGTCGA TTAAAAAGAT ATTGCAAAAT GAAAAATATA TTGGGGACGC ATTACTTCAA AAAACATATA CCGTAGATTT TTTAACGAAA AAACGAGTTG 7600
TAAATAACGG TCATGTTCCA CAATACTATG TAGAAAATAA TCATGAAGCC ATCATTCCAA GGGAGATTTA TCTACAAGTT CAAGAAGAAA TGATGCGAAG 7700
GGCAAATATA CGAAATGGAA AAACAGGAAA GAAACGTGTG TATAGTAGCA AGTATGCATT GTCGAGTATT GTATTTTGTA AAGAATGCGA AGATGTTTTT 7800
CGAAGGGTAC ATTGGAATAA TAGAGGATGC AGATCTATCG TGTGGCGGTG CGTTAGTAGA CTAGAAGGAA AAACGCATCT TTGTAATCCA GAAACAATCA 7900
GAGAAGATGA ACTCCACCAC ACCATCGTTC AAGCAATTAA TGAAGTATTA GGTAACAAAG ATGACTATTT AAGTATATTA CTAGAAAACA TTGAAACAGT 8000
TTTGAATGAA AATGCAGATA AACCAACAAC TGATATTGAC GAAAAGTTAG AAGAACTTCA AATGGAACTG CTGAGGCTCG CAAATTCAAA AGAAGATTAC 8100
GATGATGTAG CAGAAGAAAT ATACCGATTA CGGGAACTGA AGCAAGAAGT CATGATGAAA AATGCAGCAA GGGAAGGACT CAGGCAACGG ATTGAAGAAA 8200
TGACAAAGTT TTTAAAAGAG CAACCGCAGA AACTTGAAAC GTATGATGAT TTACTTGTAA GGCGATTGAT TGAGAAAATA ACGATTCATG AAAGACTATT 8300
AACAATTGTA TTTAAGTCAG GGATTGAAGT TAAAAAGGAA ATTTAAAAAA TTATCGTTTG TTAATCTAAG TAAAGCATAG AAATGTTGAC AGAAGCATAC 8400
AGAATAGTTT ATATTGAAAT TACATTTAGT GAGAAAGGGT GTTATTTTAC CACAATGGAC AATTAATCCT ATTTATATAA GAAAATCAGC ATAAAACAGT 8500
GAACCAGTAA CTTTAGTTAG TTTATTTGGT GAGTTTTTTG TGTCTAATTT TCAGAATAGG ATTAAAATGT GAATGTGTGG TTTACCCTAA TATTATAATG 8600
CTTTTTTAGG TGTATACTGT TAATTTTACT GACCTCCTAT TCTGAATAGA ATTAGGGGGC TTTTTATATT CCCCCTCAAA ATAAGGAGAT GGGAAAATGT 8700
TATTATTTGA AGGTACATCA TTGAAAAAAC ACATACAAGA CAGATTATTA TTTGATATAG ATTTAATACA AGTACATGAA CATCAGCGAA TAGGATTAGT 8800
AGGTAGGAAT GGAACGGGGA AAACAAGTCT ATTAAAAATT ATTACAGGTG AAGAACTAGT TGATGGAGGG AATGTTAATC ATTTTACCTC TGTAAAATTA 8900
GTACCACAAT TTAAAGAAAC AAGATCGGAG AAAAGTGGTG GAGAAATAAC GCAACAATAT TTGCAATTAG CATTTAATGA AAAGCCAGGA TTATTAATTT 9000
TAGATGAACC AACGACTCAT TTAGATACAC AAAGAATTGA TTGGTTAGAA AAGAAATTAG CAAACTATCA AGGAGCATTT GTTGTCGTAT CACATGATCG 9100
GACATTTCTA AATAATGTGT GTACTGAAAT ATGGGAAATA GAAGATGGTA GTCTAAACGC GTTTAAAGGG GATTATAATG CTTATGCGGA ACAAAAGGAA 9200
TTAATAAAAA CACAGCAGCA GATTGCATTT GAAAAGTACG AACGAGAGAA AAAGCAATTA GAAAAAGCAA TACGACAAAA AGAGGAAAGA GCACAGCGAG 9300
CAACAAAGAA ACCTAAAAAT CTGAGTTCTT CAGAGGCAAG AATAACAGGA GCTAAAACCC ATTATGCCAA TATACAGAAA AAGTTGAGGG GTTCTGCAAA 9400
AGCATTAGAA ACAAGGTTGG AACAACTGGA TAGGATTGAC AAGGTGAAAG AACTACCTGA AATTAAGATG GATATATTAA ATAAAGAAAG TCTAACAAAC 9500
CAGTCTGTGT TACGCGCTGA AAACATTAAG GGAGAGGTTG ACGGACGTAA GCTTTGGAAT CCCTTTAGTT TATATTTATA TGGCGGCGAT AAAGTTGCTA 9600
TCATTGGGAA AAATGGCACG GGTAAAACAA CCTTACTTAA AAAAATAGTT GAGCGAGATG AAAGAATAGC AATCCCAGAA AAGGTGAGGA TAGGTTATTT 9700
TTCCCAACAC CTCACAATTC TCGATGATGA TAAAACAATC ATAGAAAATA TACAATTGAC CTCTAGTCAG GATGAAACAT TAATTAGAAC AGTTTTAGCA 9800
AGAATGCATT TTTGGGATGA AGATGTCTAT AAAAAGGTCG GCATATTAAG TGGTGGTGAA AAAGTAAAAG TAGCACTAGC TAAACTATTC TTAAGTGACG 9900
TGAATATGCT GGTGTTAGAT GAACCTACAA ATTTTTTAGA TATTGAATCT TTAGAAGCGC TAGAAACATT AATGAAAAGT TATCATGGAA CGATTCTATT 10000
TGTTACTCAC GACCGAACGT TAGTAACAAA TATAGCTACA AAAATAATTG ATATAAAAGA TGGTAAGATA ACAGTATTCG ATGGATCATA CGAAGCATAT 10100
GAAGAGTGGT TAGAGAATCA AACAAAGTCC AACAATGATG ATCAACTTTT ACTAATCGAA ACTAAAATAT CTGACGTTCT GGGTAGGTTG AGTTTGGAGC 10200
CTTCACGAGA GTTAGAAGAT GAATTTCAAA GATTATTGAA AGAAAAGAAA GAACTGACTA AAAAACTATA AAAACTTCTA TTGTCTGTAT GAAGCGACAC 10300
CGTCATAAAA GAAGTAATGC TAAGCACTAA AAAAGGTATG CATATTGAAA TGTTAAACAT TTAATTGAAA AGATAGTGAC TCATAGTAGG GAATTGACTA 10400
TGAAAATTAA AGTGGAAAAT AAAATGGGAA TATAACAAGG ATTTCTAACA AGCCCGTGTC GGAAAAGGCA TGGGCTTTTT TATGTTAAAT TGACTGAAAA 10500
TTTTAATAGT TATAGAATGT AAGTATACGA TGAAAGTGGT AAGTAATGAA AGAATGTCGA TAAAGTAGGA ATGGGGGGAT CTTTTTGAAT ACAATAGAAT 10600
CACAGTTTGA TAAGGTTGCA GAAGATTACG ATTTCGTGAA TGAGCTTTTG AATGATTATT CATTCTTTGT GTCTAATATG TCTCCAAAGA AAGGCAGAGC 10700
ATTAGATATC GGATGTGGCT CGGGTTTGTT AGTGGAGAAA TTAGCAAGTT ATTATGATGA AGTGGTAGGG ATTGATATTT CTAATCAAAT GCTCGATCTT 10800
GCCAAATCTA AACGTCAACT AACAAATACG GTCTATCTGA ATATGAATGC AGAACAACTT AATTTTAATG AGAAGTTTGA TTTTATTGTA AGCCGAACAA 10900
CCTTTCATCA TTTGGATGAT ATAGCCAGCG TAATACAGCA AATGAAGGAA CTGTTGAATG AGGAAGGAAG AATAGTTATT CTTGATAATG TATCTGAAGT 11000
CGAGACACCG CCTACCTATG TTTATAAATT AGGGGCAATC CAAGAGTTTT TACCGCATTG TTTCAAATTT GGAATAAAAA ATGCGATTAG AATTTATAAT 11100
CACAACACAT CTAAATCATG GCTTGAGCAT TTAGCTTCAG ATAAGTACCT ATCTGAACAA AATTATTACG ATTTATATGA AAAGTTGTTG CCTGGATGCC 11200
AATTCCATAA AATGGGTTGG GCAATGGGGG TTGTCTGGAC AAAATAACTT AAAGCTGTGG CTTTGAAAAG TTGAATTTGT GATTGTTTTC AGAGCTATCG 11300
GGTGCTTTAG TATAAATAAC AATGAATAAA AAATCAGCCT GTATCTTATG TTACTATTAA GTAATTTAAG ATACAGGTTT TACTATTTTT GAAATAAGTA 11400
CCTTCCACTT CAAATACATG TATTCAAAGT GAAAGTATTG ATTTAAATGA TTCTTTTGTA ATTTACTCTT GATAAAACAT C

 ORFs     
ORF Summary
Gene Name Associated TE Coordinates Class Sub Class Orientation
tnpA Tn6133 140-1225 Transposase   +
tnpB Tn6133 1222-3114 Transposase   +
tnpC Tn6133 3121-3498 Accessory Gene Helper +
ANT(9)-Ia (ARO:3002630) Tn6133 3649-4431 Passenger Gene Antibiotic Resistance +
ErmA (ARO:3000347) Tn6133 4557-5288 Passenger Gene Antibiotic Resistance -
AXN76177.1 Tn6133 5863-6360 Passenger Gene Hypothetical +
WP_031795519.1 Tn6133 6360-6776 Passenger Gene Hypothetical +
WP_031795518.1 Tn6133 6778-8346 Passenger Gene Hypothetical +
vgaE (ARO:3002833) Tn6133 8697-10271 Passenger Gene Antibiotic Resistance +
SAM-dependent methyltransferase Tn6133 10585-11247 Passenger Gene Other +

ORF Details
Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA Tn6133 1086 140-1225 +
Class:   Transposase
Protein Sequence:  
 MKVQRIEVEN KPYPLYLLLD KEYQLIEPVM KFIKYLDNTG KSPNTIKAYC YHLKLLYEFM EQRGVILNDI NFELLADFVG WLRYPSASNV IDLQSKKAIR
EETTVNTILN VVMSFLDYLS RLGEFKSIDV FKQAKGRNFK GFLHHVNKGR YQKNVLKLRV KKKQIRTLRS KEVKQIIDAC HTKRDKLILM LMYEGGLRIG
EVLSLRLEDI VTWDNQIHLT PRDVNVNEAY IKLRKERTIH VSKELMSLYT DYLIYEYSEE LEHDYVFISL KEGYFGKPLK YQSVLDLVRR IVKRTGIEFT
SHMLRHTHAT QLIREGWDVA FVQKRLGHAH VQTTLNTYVH LSDQDMKNEF NKYLERKEHK K

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpB TnpB Tn6133 1893 1222-3114 +
Class:   Transposase
Protein Sequence:  
 MNASSKRKII SQSEISKKIA VMNEEMQGFW ANNSWDIRKC PHPSAIELSK NPALRNRWVR FERVKNLWLR TELKYFYFYH LNNGIWNAKT VWIRKGTVIN
KMLDFLDLKY PSITSITEVP IEKAMTEYRT YLTKRGVRIT TTNYKITANQ EKTPVKANSY YVTNLKQFME FYENFYFDGE EWDKDVWDRR NLPLPDDKVN
PTQYEYTINF KGFRNTYFKQ LVKRYCKLRL NVDSFSYVSD IAQRLKEFFN FLDMKFKQVQ RVHQLTRVEI EAYLSELNMM GIKPSTITGR ISILEGLFST
LLRLEWDDVP SKILIYSEDY PKIPRAKPRF IDEFVLEQLN SHLDKLPEYI ATMTMIVQEC GMRISELCTL KKGCLLEDKD GDFFLKYYQW KMKKEHIVPI
SKEVALLIKV REDKVSEEFP DSEYLFPRKD GSPLKQETFR GELNKLAYEQ NIVDKSGEIY RFHAHAFRHT VGTRMINNGM PQHIVQKFLG HESPEMTSRY
AHIFDETLKN EFTKFQEKLV TNNGDVLDLD EDNEVDDVEL QWFKKNINAQ VLPNGYCRLP VVAGGCPHAN ACLDCTHFCT SKQFLPQHEE QLERTEELLA
IAKDKQWQRQ VETNSRVKER LEQIIGSLTG

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpC TnpC Tn6133 378 3121-3498 +
Class:   Accessory Gene
Sub Class:   Helper
Sequence Family:  Tn554_family
Comment:   target specificity and orientation
Protein Sequence:  
 MDKQVRNTTE IVRLAKQKSK KTREKVDKAI SKFSIEGKVI NFNSIAKEAN VSKSWLYKEH DIRQRIESLR ERQITANVVS KPKKSSRSEE ILIKTLKRRV
MELEKENKKL QNQIQKLYGD LYNKE

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
ANT(9)-Ia (ARO:3002630) ANT(9)-Ia Tn6133 783 3649-4431 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  ANT(9) (ARO:3000228)
Protein Sequence:  
 MSNLINGKIP NQAIQTLKIV KDLFGSSIVG VYLFGSAVNG GLRINSDVDV LVVVNHSLPQ LTRKKLTERL MTISGKIGNT DSVRPLEVTV INRSEVVPWQ
YPPKREFIYG EWLRGEFENG QIQEPSYDPD LAIVLAQARK NSISLFGPDS SSILVSVPLT DIRRAIKDSL PELIEGIKGD ERNVILTLAR MWQTVTTGEI
TSKDVAAEWA IPLLPKEHVT LLDIARKGYR GECDDKWEGL YSKVKALVKY MKNSIETSLN

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
ErmA (ARO:3000347) ErmA Tn6133 732 4557-5288 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic target alteration (ARO:0001001)
Target:   streptogramin B antibiotic (ARO:0000050)||lincosamide antibiotic (ARO:0000017)||streptogramin A antibiotic (ARO:0000034)||macrolide antibiotic (ARO:0000000)||streptogramin antibiotic (ARO:0000026)
Sequence Family:  Erm 23S ribosomal RNA methyltransferase (ARO:3000560)
Comment:   perfect match to reference sequence for ARO:3000347||Synonyms: ermTR
Protein Sequence:  
 MNQKNPKDTQ NFITSKKHVK EILNHTNISK QDNVIEIGSG KGHFTKELVK MSRSVTAIEI DGGLCQVTKE AVNPSENIKV IQTDILKFSF PKHINYKIYG
NIPYNISTDI VKRITFESQA KYSYLIVEKG FAKRLQNLQR ALGLLLMVEM DIKMLKKVPP LYFHPKPSVD SVLIVLERHQ PLISKKDYKK YRSFVYKWVN
REYRVLFTKN QFRQALKHAN VTNINKLSKE QFLSIFNSYK LFH

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
AXN76177.1 AXN76177.1 Tn6133 498 5863-6360 +
Class:   Passenger Gene
Sub Class:   Hypothetical
Comment:   ORF6133_1
Protein Sequence:  
 MLFIKEERIH QAFITMMNKL KFGYSYVLIP LSKQLETSNQ DEDFQMITEI EKQIEVTKEE LNTLIQLMTK GFLEPAIFNQ QKIELSQRHM KLKEEREQLL
YLINDGSNQL SEVKRIIKYF KQVNFIAAFD EETFQDIVRK VIVYSPNEIG FHLKCSITLK ERINR

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
WP_031795519.1 WP_031795519.1 Tn6133 417 6360-6776 +
Class:   Passenger Gene
Sub Class:   Hypothetical
Comment:   ORF6133_2
Protein Sequence:  
 MAHTPFGYAM VNGKIEVQAK EAEQLKLLIA SYLSGQSLAN AARESGINRS HGGITRILTD ERYLGNGLFP RLISKEQFEQ LKNERFKRAK KLGRLNRTKE
EESFTPCFEF TIGEVEDKYD NPIKQAEYVY SLIKEEVT

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
WP_031795518.1 WP_031795518.1 Tn6133 1569 6778-8346 +
Class:   Passenger Gene
Sub Class:   Hypothetical
Comment:   ORF6133_3| recombinase family protein [Staphylococcus aureus]
Protein Sequence:  
 MALARSVTVI PARRRTRNVD AEKKEKLKVA AYCRVSTDSE EQATSYEVQV EHYTTYIQNN PEWELAGIYA DDGISGTNTK KREQFNKMIE DSMNGKIDMI
ITKSISRFAR NTLDCLKYIR QLKDKEIPVF FEKENINTMD AKGEIMLTIM ASLAQQESQS LSQNVKLGIQ YRYRQGEVQV NHNRFLGYTK DENNKLVINP
EQAKIVKRIY REYLEGASLV QIARGLEADE ILTAAKRTKW RPESIKKILQ NEKYIGDALL QKTYTVDFLT KKRVVNNGHV PQYYVENNHE AIIPREIYLQ
VQEEMMRRAN IRNGKTGKKR VYSSKYALSS IVFCKECEDV FRRVHWNNRG CRSIVWRCVS RLEGKTHLCN PETIREDELH HTIVQAINEV LGNKDDYLSI
LLENIETVLN ENADKPTTDI DEKLEELQME LLRLANSKED YDDVAEEIYR LRELKQEVMM KNAAREGLRQ RIEEMTKFLK EQPQKLETYD DLLVRRLIEK
ITIHERLLTI VFKSGIEVKK EI

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
vgaE (ARO:3002833) VgaE Tn6133 1575 8697-10271 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic target protection (ARO:0001003)
Target:   streptogramin antibiotic (ARO:0000026)||pleuromutilin antibiotic (ARO:3000670)||streptogramin A antibiotic (ARO:0000034)
Sequence Family:  vga-type ABC-F protein (ARO:3000113)
Comment:   perfect match to reference sequence for ARO:3002833
Protein Sequence:  
 MLLFEGTSLK KHIQDRLLFD IDLIQVHEHQ RIGLVGRNGT GKTSLLKIIT GEELVDGGNV NHFTSVKLVP QFKETRSEKS GGEITQQYLQ LAFNEKPGLL
ILDEPTTHLD TQRIDWLEKK LANYQGAFVV VSHDRTFLNN VCTEIWEIED GSLNAFKGDY NAYAEQKELI KTQQQIAFEK YEREKKQLEK AIRQKEERAQ
RATKKPKNLS SSEARITGAK THYANIQKKL RGSAKALETR LEQLDRIDKV KELPEIKMDI LNKESLTNQS VLRAENIKGE VDGRKLWNPF SLYLYGGDKV
AIIGKNGTGK TTLLKKIVER DERIAIPEKV RIGYFSQHLT ILDDDKTIIE NIQLTSSQDE TLIRTVLARM HFWDEDVYKK VGILSGGEKV KVALAKLFLS
DVNMLVLDEP TNFLDIESLE ALETLMKSYH GTILFVTHDR TLVTNIATKI IDIKDGKITV FDGSYEAYEE WLENQTKSNN DDQLLLIETK ISDVLGRLSL
EPSRELEDEF QRLLKEKKEL TKKL

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
SAM-dependent methyltransferase SAM-dependent methyltransferase Tn6133 663 10585-11247 +
Class:   Passenger Gene
Sub Class:   Other
Comment:   perfect match to reference sequence for Uniprot A0A347WKB4 and Q5HNP8||Synonyms:
Protein Sequence:  
 MNTIESQFDK VAEDYDFVNE LLNDYSFFVS NMSPKKGRAL DIGCGSGLLV EKLASYYDEV VGIDISNQML DLAKSKRQLT NTVYLNMNAE QLNFNEKFDF
IVSRTTFHHL DDIASVIQQM KELLNEEGRI VILDNVSEVE TPPTYVYKLG AIQEFLPHCF KFGIKNAIRI YNHNTSKSWL EHLASDKYLS EQNYYDLYEK
LLPGCQFHKM GWAMGVVWTK

 References